LOC120574180 (LOC103371177,LOC102309677,LOC102203270,LOC101480034)


Basic Information

Item Value
gene id LOC120574180
gene name LOC103371177,LOC102309677,LOC102203270,LOC101480034
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 4899626 ~ 4903295 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824384.1
AGTCACCAAACGGCCTTTCTCCAACCAAAGTCCAGTGTTGATGTTTGGGTTGAACAGAATGGAGCTGAACCTACCATGTAGCTAACATGTAGCTACGTTCAGAGGGTAACTAAAGCTTCAACGCGGAGAAGAAACGACCTATTTTAGTAAGACTGAGAGGTGTCTAATAACGCGGACTCTGgGGATTAGTAAGAgaaaaaggagccagttgataATGGAGGGTGAGAAGGAAGGAGATGACTCTGAAACCAGATGGAAAGAAGAACTCCGGCTGGTCCTCATCGGAAAGACCGGATCTGGCAAAAGTGCATCTGGAAACACCATCCTGGGCCGGAGGCAGTTCCTGTCACAGATCAGCGCTAGCTCTGTCACCCAGATTTGCCAGCTTGGGAGCACTGAGCTCGCTGAGGAAGAGGATGCTGAGGAGGACGGCCTGGCTGTCGCACAGAGGAGGATGACGAGAGTCACGGTGGTTGACATGCCCGGTTTTGGGGACACTCACCTGAGCGTGGAGCAGATCCATGCAGAGGTAGCcaaatgtgtgtctctctctgcccctGGGCCACATGCTTTCCTCCTGGTGGTTCCAATAGGACGATATACAGACAATGAGAACCAGGCTGCCTGCGAGTTGACCAAAATATTTGGGGAGGATGCAGTCCGTCAGCACACATTGGTTCTTTTTACCAGGGGGGATGACTTGGAGGGCACGGGGATTGACGATTATCTGAGGGAGACTGCACCTGCTGGGCTTAAAGCTCTGATTGAAAGGTGTGGGGGCAGGTACCATGTACTCAACAACAAAGACCCCAGTAACTCGGCACAGGTTAAAGCACTGTTAATGAAGGTGGGCAAGATGGCGAAGCAGACTTACGGAGGGTTTTATACTAATGCCATGTTTTTAGAAGCAGAGGCAGCCATCagggaggagcaggagaggatgCTGAGGGAGCGAGGGCCAGCAGAGGGCGAAGAACAACGGGGAAACAGTGACAGCATGGAGGAACAGGCTAGACTCGCAAAACGAAGAAAGTGTGACTTGGAGTTTAACAGAGCAGAGAGCTTAGATATGGGATCACAGGGGGCCAGGAGGCGGGGGTTGGAGAGAGGAAATGAAGAGGAATTTAGGGTGGAGAggtggagagaggagagcagaggCAACCCCTTCAGCTTCCTGAGGGACAGAGTTGAACAATGGAGGGATCCGTCCAGAGGCTGGCCCAGAGACCGCAGCAGGGCCGCGAGTAGGCGGCAGTCTCTCCGTTCGTCCATGAGGAGGGAGGCTGCGCTCTCTGCTAAGGTGCTGGAGAGAGTTAAGATCCTGGTGGCTGCTGGAGCCACAGGCATGGCAGTAGGGGCGATGTTTGGGGCAGCTGCCCCTCTAGCAGCTGCAGCCGGGGCATCTTTTATGGGGAACTCGGTTGGTTTTGCTGCGGGTCAGCTAGCTGGGATGTCTGTGGCCGGAGGCACGGGTGTTGGGAAAGCTGTGGGGGCCATAGTGGCGGCAGCCTCAGGGAAAACTGCAGTGGCTCTGGGGGCAGCAACCGGTGGAGTTTTGGGTGGTTCTGTTGGAGCCGTTGCTGGTGCTGAAGCTGCCAGTCCTAGGGAGGGCGCTCTGGATGCCCTGGGGCAGGTTAGTCTCATAGGGGCCTCTGCTGTGGGGCTGGCAGCAGGTGTGGGAGGCACCATGGGAGCTGGGGCTGCTTTAGGCGCAGCTCTGGAGGGAGCAGCTTTCAGCACAGCAGCCCTCTGTGGAACTGAAACTGCATCAGTAGGGGCAGCAGGTGTAGCCAACGCTTCTGTAGCTCAGAGTTTAGCCTCAGCAGCAGGACATCATGCTGTGGCCTCTGTAGGAAGTGTAGCTGCAGGTACTGGGACTCCTCAGTGTGCTGCAGCCGGAGCAGCTTTAGCTCAGGAGATGGCTGTGAATGTCCCAGTGGCTGCTGGGTATGGCAGCGCTGTATGTGGGTTAACAGGGCCCAGTGTGGCATCAGTGGCCAGCAGGGTTGTGTCAGACCCCTGGGGCGCTGTGGCGGTATCGACACGCATAATGACTGCGGTGGCTGAGATAGGCAAGGCTGCAGCAGGCATTGCCCTGGCTGGCGGTCTGGTAGTGAAGGTAGTAAAGGAAAAAGTCAGATGTGGCACAGGAACAACTGAAGCCAGTTACTCAGAGAAGAAGTCATATGAAGTCTACTGGAACAAATAAATACAGGCTATGAATAGAGCCATAATGTAATAGTGAatgagctcattttttttttcttgcctccTGAGTCCTGATTAAGTACTAGACACTACAGTAGCTTCCCCCCGTAAGACATATTGCTATGCCATGGAAATACAAACCACTGCAAAGATGCAATCACAAATTATAATAGATGGAAGAGAGCAGAAATTGTAATTGCAAATTTTGGTTGGAACTGTTTGAGGCTGGTGAATGAGTTCAGTGAACTTTTGCAATGCTGTGTGATGACTAATAAggacacacatttttttatccAATTGATTTTTATAAGGTTGTGATCAATCTCGCCTTAATGTGTTCATACATAAATtttttaaaggggctgtacttgaTATTTAGAACATCAATATAGCAGTAAACcaatatttgctatgtaaagatatagagGAGTACTGACGTCCTTCACAGAGAATGAAGTCCCactccatctgtgtgtgtcgtccgagcttctctgttctttgttttgatagccaGACGGGCCGTGCTTGCGTGTAAGTGCGCGTAGCTGTGGGAAAACGGCGGCCTTTCACGTATGGGGGAGTGGTCTATGAGAGCCACGTGGGGGCAATCCCCGTCCGctgttttctattttatttatttttttttttttttgcagaatttGAAGTGCAGCCcctttaaacaaatatttacttCTGGAAAGTACACTGATGAACATGTCAGCCGTGTAAACTCAGTTGAATGGGTTGAATGGGTTACAATTTGACTTTCTTTTGGCCTTTCTAAAGAACAATCAGAACTGTAAACATTCTTAAGCATCATATAAAAGTATTTGTTGGGTGAGATTAAAGTGTTAACGTAACTAATCTTACTCATTACAGTAATGGGTGTTGAAAATGAACTGAAGTGTTATATTtaaagtgtttcctttaggttttttttagcagtgggggcaggtccgaacacAGGTCCGTACCGAAACAGAgctgaca

Function

NR:

description
PREDICTED: uncharacterized protein LOC103371177

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824384.1 True 3198 mRNA 0.50 2 4899626 4903295

Neighbor

gene id symbol gene type direction distance location
srebf2 srebf2,LOC102798161 coding downstream 1714 4871597 ~ 4897912 (-)
nol12 NA coding downstream 33044 4861415 ~ 4866582 (-)
LOC120574312 NA coding downstream 39537 4855277 ~ 4860089 (-)
triobpb triobp coding downstream 44026 4831333 ~ 4855600 (-)
ndufa6 ndufa6 coding downstream 70694 4824252 ~ 4828932 (-)
LOC120574181 ccdc134 coding upstream 818 4904113 ~ 4913556 (-)
LOC120574178 NA coding upstream 10787 4914082 ~ 4972215 (-)
kdelr3 kdelr3 coding upstream 97031 5000326 ~ 5004464 (-)
polr2f polr2f,LOC107727050 coding upstream 154873 5058168 ~ 5062273 (-)
LOC120575086 NA coding upstream 159744 5063039 ~ 5072099 (-)
G151924 NA non-coding downstream 6308 4869887 ~ 4893318 (-)
G151799 NA non-coding downstream 315466 4583204 ~ 4584160 (-)
G151790 NA non-coding downstream 376052 4518781 ~ 4523574 (-)
G151785 NA non-coding downstream 420747 4477384 ~ 4478879 (-)
G151783 NA non-coding downstream 486466 4411516 ~ 4413160 (-)
G151951 NA non-coding upstream 110222 5013517 ~ 5024092 (-)
G152052 NA non-coding upstream 267009 5170304 ~ 5170652 (-)
G152081 NA non-coding upstream 384563 5287858 ~ 5290361 (-)
G152104 tob2 non-coding upstream 487210 5390505 ~ 5395115 (-)
G152107 NA non-coding upstream 543208 5446503 ~ 5448057 (-)
LOC120574081 grin2b,fmc1,LOC102794452,LOC102794917 other downstream 134133 4585173 ~ 4765493 (-)
LOC120575466 LOC102292836,LOC101471904,LOC100692969,LOC103393382,LOC103468414,LOC102212070,LOC103143659,LOC102784177 other downstream 434635 4416177 ~ 4464991 (-)
LOC120575464 NA other downstream 532283 4361848 ~ 4367343 (-)
G151344 smarca4 other downstream 1582711 3311727 ~ 3316915 (-)
G151227 LOC103393680 other downstream 1984259 2911326 ~ 2915367 (-)
G152043 cdc42ep1,LOC102301584,LOC102206375,LOC102078793 other upstream 275021 5178316 ~ 5227241 (-)
G152114 rbx1 other upstream 558551 5461846 ~ 5464418 (-)
top3a top3a,LOC102783137 other upstream 645996 5549291 ~ 5567539 (-)
atp5mf atp5j2,LOC102786280 other upstream 671385 5574680 ~ 5613722 (-)
bud31 bud31,LOC106595689 other upstream 676968 5580263 ~ 5582864 (-)

Expression


Co-expression Network