LOC120574181 (ccdc134)


Basic Information

Item Value
gene id LOC120574181
gene name ccdc134
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 4904113 ~ 4913556 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824385.1
CTCTCTTTaaatcctccgtgcggaaacaacATCCTCGTCCTCGGTTAGCGCCCGCTGGCTGTCATTCGTCCGAGGCGAGCCAGCCGGTGCTATCGTGGCGCTGGCAGAGTGGAGCAGCGAGAGCCGCATGTAAATGAACACCTTCTGCCTCCGTGTTGTTGTCACCTGAGGATCCAGAGGGGCACGCTGACCGTCTCGTCCCCGTCATCGGCGAGCTGACCTTAAACGTCTCGTGTGgagatataaaaaaagaagaagaaggttaAACTGCACTACTTTGGAGCAAACGCTGTCCGCTAATCTCTGCCGTGCGGCGCCGCCGTTTCTCGCCACAACACGGAGAGTGCCTCTCTGCCGACCCCTGCTGACCATGCGGAGTGTGTGTGCGGTGGTCCTGGCGCTCGCCGCTGCCGCCCTCAGCTCGGCCGACTCAGACACGCACAGACTGAGACATGACTCCAACCTGGAGATCTACAAGCGGCTGTTTGAGACTAAGAGGAAAGATCAACTCAACGCCCTCAAGAATCTGGTCGAGCTGAACGACATCAACCAGCAGTACAAGATCATAGACATCATGCTCAAAGGACTCTTcaagGTGTTGGAGGACTCGAGACAAATCCTGGTTGCGGCCAACATGCAGCCTGACGACCCGTTCCCAATGGACGATAAGATCAAAGAAGCTTATTCCCATGTGGTGGAGAACACAGCATTTTTTGGCGACGTGGCGTTGCGTTTCCCACGTATCGTCCACCACTACTACGACCGGAACAATGACTGGGACGGCCTGCTGCGCTGGGGGCTGAATTTCTGTAACCAGACGGGGGTTTTCACCGGAGGAGCCCACCAACATGTCCTCACACTTATGTCACAGGAGCTGGGAATAATGGAGAAATCCCCAGACTTTATAAACCCATACCGCACAGAGAGAGACGATGTGCTTCACACTGCCGAGGCTTTCCAGAAGAtcctgagggaggaagagaagaggaggaggaaagaagagaagaggaaagaaatcAGGAAAGGTCCTCGCATCTCCCGCTCCCGCACCGAGCTATAGCGCTACAGCGCGGTGCATTTGGAGAGCAGAGAAGAGGGGCAAGGAGCACACGCACAGTCCACAAGGGGTGGCTTGACTTGTAGACTCCTGTCGACAGTGAAGGAAATAAAAGCTGTCCTCACAAAAGCCAGGTGCTCTGTTGAAAACAAGAGAGCGACCCTCAAGGTGACACAAAAAGGGGATAGTGGAGGTTAGTCAGTTTCTGACAAAGGCTTGAATCGCTCTACATCTACAGTGATTCATAATTGGAAAATCTAACTTATAGGAGGTAAAAGACGTCTCTGGAATAGGAGTTGATAAGGGAAAATCATTTTTGATAACCTGAGGATTACATAACTGTACTTTGGAATATAATTCGTTTTAGTAtaatctt

Function

symbol description
ccdc134 Predicted to enable GTP binding activity. Orthologous to human CCDC134 (coiled-coil domain containing 134).

NR:

description
PREDICTED: coiled-coil domain-containing protein 134 isoform X1

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824385.1 True 1433 mRNA 0.52 7 4904113 4913556

Neighbor

gene id symbol gene type direction distance location
LOC120574180 LOC103371177,LOC102309677,LOC102203270,LOC101480034 coding downstream 818 4899626 ~ 4903295 (-)
srebf2 srebf2,LOC102798161 coding downstream 6201 4871597 ~ 4897912 (-)
nol12 NA coding downstream 37531 4861415 ~ 4866582 (-)
LOC120574312 NA coding downstream 44024 4855277 ~ 4860089 (-)
triobpb triobp coding downstream 48513 4831333 ~ 4855600 (-)
LOC120574178 NA coding upstream 526 4914082 ~ 4972215 (-)
kdelr3 kdelr3 coding upstream 86770 5000326 ~ 5004464 (-)
polr2f polr2f,LOC107727050 coding upstream 144612 5058168 ~ 5062273 (-)
LOC120575086 NA coding upstream 149483 5063039 ~ 5072099 (-)
LOC120575087 ddx17 coding upstream 170194 5083750 ~ 5093141 (-)
G151924 NA non-coding downstream 10795 4869887 ~ 4893318 (-)
G151799 NA non-coding downstream 319953 4583204 ~ 4584160 (-)
G151790 NA non-coding downstream 380539 4518781 ~ 4523574 (-)
G151785 NA non-coding downstream 425234 4477384 ~ 4478879 (-)
G151783 NA non-coding downstream 490953 4411516 ~ 4413160 (-)
G151951 NA non-coding upstream 99961 5013517 ~ 5024092 (-)
G152052 NA non-coding upstream 256748 5170304 ~ 5170652 (-)
G152081 NA non-coding upstream 374302 5287858 ~ 5290361 (-)
G152104 tob2 non-coding upstream 476949 5390505 ~ 5395115 (-)
G152107 NA non-coding upstream 532947 5446503 ~ 5448057 (-)
LOC120574081 grin2b,fmc1,LOC102794452,LOC102794917 other downstream 138620 4585173 ~ 4765493 (-)
LOC120575466 LOC102292836,LOC101471904,LOC100692969,LOC103393382,LOC103468414,LOC102212070,LOC103143659,LOC102784177 other downstream 439122 4416177 ~ 4464991 (-)
LOC120575464 NA other downstream 536770 4361848 ~ 4367343 (-)
G151344 smarca4 other downstream 1587198 3311727 ~ 3316915 (-)
G151227 LOC103393680 other downstream 1988746 2911326 ~ 2915367 (-)
G152043 cdc42ep1,LOC102301584,LOC102206375,LOC102078793 other upstream 264760 5178316 ~ 5227241 (-)
G152114 rbx1 other upstream 548290 5461846 ~ 5464418 (-)
top3a top3a,LOC102783137 other upstream 635735 5549291 ~ 5567539 (-)
atp5mf atp5j2,LOC102786280 other upstream 661124 5574680 ~ 5613722 (-)
bud31 bud31,LOC106595689 other upstream 666707 5580263 ~ 5582864 (-)

Expression


Co-expression Network