foxred2 (foxred2)


Basic Information

Item Value
gene id foxred2
gene name foxred2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 3549227 ~ 3561807 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824413.1
tccaggGGGAAGTGGGCGGGTTCTAGCCTACTAGTGAATTGCGCTTTAAGATGCAAAAGCGTAATCATGTAGCAGCCTCGACAGGTTTGATAGCCTACATGCTAAACTACAGATGTTGCGCTCGGGGGAACGACTAATATAAAAAGGTTATGGATTCAAACCTTCCTTGTTTTATCCTCTTCATCTTGGTTGGCTGTGTCAAATGCTCTTCTGAATACCACCCCCACAACGGCACCCGCCACTATGATTACTGCGTGCTCGGAGCCGGGCCTGCAGGACTGCAGATGGGATATTTCCTCTCCAAGGCTAAAAGAGACTACATCATCTTGGAGAGGAACTCCGGACCGGGCAGCTTCTTTAACAAGTATCCCAGGCACAGGAAGCTCATTAGTATTAACAAGATCCACACAGGAAGGCAGAACCGAGAATTCAACCTGCGCCATGATTGGAACTCGCTGCTGAGCGACAAACCTGACCTGCTGCTCAAGAGAGTGAGCAGGGAGTTTTACCCGCCAGCTGATGCCTTCCCGCTCTATCTGTCCACGTTTGTGAAGGAGCTCGGGCTGAAGGTCCGGTATGGTGTGGACATCGGAAGGATCAGGGCAGTGCAGTCAGTCACTGGCAGAAGATACATCCTGACTGATCAACATGTGTCGGACTACACATGCAGcgTCCTTCTGGTAGCCACAGGTTTGTGGGTTCCTCACAAGGTAGAGTTTGTCGGTTCTGACCTGGTTGAAGGCTATGAGTCCATCTCCACTAATCCTGAGGACTACAAGGACCAGTCCGTACTGATTCTGGGCAAGGGGAACTCGGCTTTTGAAACAGCCCAGAGCATCTTGGGAAGAGCAAGTCATGTGCACATGATCAGTTCCAGCCCTGTTCGACTCGCTTGGCAAACACATTATGTTGGAGATCTCAGagCTGTGAATAATGAGCTCATAGACACATATCAGCTGAAGTCCCTTGATGGCTTGTTGGAGGCACACCTGGATAAAATAGTTATCGCTCAACGAAAGGAGCAAGGCAGGACGAGGTCAggtgaaaagaagaaagagaagaagggaCAGTTGTACGTGACATTAAAGAAGTTTTTACAACATCAGAAACAGAAGAACAGCTCTGATGTGACAGGAGAAGAGCTGCCAGGATAttacatcgacaacttctcttTGCGGAAGCCCTACGACCGGGTGATTCGATGCCTTGGATTCCGATTCAACTTCAGCGTATTTGACAGCTCTGCCTGCCCACCGAAAAGTGACAATGCCAAAGGGCGGTTGCCGAAGGTGACAGCCTGGTATGAAGGGAAGAACACTCCTGGCTTGTTTGTGCTGGGAACTGCTGCTCACTCCAGAGACTACCGCTCATCTGCTGGCGGCTTCGTCCATGGGTTCCGGTACACAGTGCGTGCTGTACATCGTGTACTTGAACAACGTTACCATAGTAACCCGTGGCCATCGACAAAACTGTTGACAACGCAGCTGCAGTCCTGGATTCTGAAGCGGGTTGGCGAGGCTTCTGGGCCATACCAAATGTTTGAGGTGCTTGGGGACGTTATACTTCTACGAGGCTCTCACTGTGAATACGTGGAAGAGTTTACACTCCAGGCCTTGCCTCAGTTCTCCAATCTCTCGGGCCACGAGGTCTCAGACCATGGACTGATCGTTCTAGTCATGCAGTATGGGAAGAAGAAGATAGATTATCTTGGGCCGGAAAGGACTGAAGGAGACTGGACCAAAGCATGGAAATCCAACTTTCTGCACCCTGTTTTATACTACTATGACACACTTCCTACTGAGGAAGAAATGAAGCTCCGTCCCTCTGGCTGGGCTTTACCGAGGCCCAAGGCAATTCATCACATGGTCGAGGACTTCCTCGCTGAATGGGATAGTCCCTTATCTCACATCCAGCCTTTGCGGCGCTTCCTGGAGCACTGTGTCCAGACTGACCTCAGGGCCTTCTATGCGGAATCATGTTTCCGCTCAGCCCTTACCCACCGAAAGCCGCCGCTGTTTTGTCAGCAAGGATACTTGAAGCGGCAGGGTGTCGCTCACCGCAAACAGCCGTGGCAGCACATTCATGACGCTGGACTGATGCCTACTGAGCAAGATGCAGGCACATCCGTGGCTGACCCCGCATTCTCCAACTGCCTGGCACAAGCTGGAGCCTCCAAGTCCTCAGGACTGAAACTTGACTCCTGATTGTTTTTCTCAAGCGTTTTAAAGCCATGCCTATGATGCTGTTTAGGTTCCTCAAACTTGCTACCTCCACCACCCATAATTCCCTCCTCAAAACCAAATATTCTGACAGAATACTATAACCTAAAAGTAAGACAATTTCTTCTTACAAACCCTCGTCACCACATGTGAATGTCTAATGGTACGTGTCCACAGTGGCGTTTTTTGACGGTAGGGATCGCCCCGCTTTTCAGGATGGGCTCTTGATGGGCTTGTGACACGCAGTCATCAATTTCTCTTCAATGACGAGCCAAGAAAACAGGCTACGCCCTCCGACAACCATGATGGCTGAACCTGATTGGATGATTGCTTTACTCGTGGGCTgtctgctcccgaatttcaaaacagaccaacATAGTGGCTTGTTTGGAAACTTATTTtgcgaaaatagttcaccaaaatgTGTTCCTGAGTTTTCGAGAGGCAGAGAGTCAAGCTGGAtgcccctgatttgcataaagttgccTGGACCTTAACTTTATGCTAATGACGAGCGGGCAACTCGTAAGTCACCGTGAAACACTACCAGAATTCATTGCACGGCTGCTTACACAGACAATGAATGGCACAACCAAAGAGttattttcctttctttattttgataatgtttaaatgtCCAAAGAAGTAAAATTATTATAGTAATTCACAAGAAATAATCAAAGATTATTGGaaagtctaaaaaaaagaaagaagcatAACTTTGTCTATTTCCTCCTTTTAGTAATTATCTCGCGGCCCCTCTAGCTCATGCAACCTCCTGGGGACCCACTGTTTATCACTGGAGAGGCACTTTGTCCTTTGAATGTTCCTTGAATGTCATTCCTCACGAAATATGTCTATACATTATaatatgtcatttttatatCATGGAAGTCTAGATTATATGAAGCTGTATaggtggtgggtgggtgtgtcaAAAATGATTATGCATTTTACACGATGTTACCTGATGAAACATACATTAAAGAGGAAATACAGCCTGTTTTTTAATTCAAA

Function

symbol description
foxred2 Predicted to enable flavin adenine dinucleotide binding activity. Predicted to be involved in ubiquitin-dependent ERAD pathway. Predicted to be located in endoplasmic reticulum. Predicted to be active in endoplasmic reticulum lumen. Orthologous to human FOXRED2 (FAD dependent oxidoreductase domain containing 2).

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824413.1 True 3236 mRNA 0.48 10 3549227 3561807

Neighbor

gene id symbol gene type direction distance location
ankrd54 ankrd54 coding downstream 195 3543024 ~ 3549032 (-)
hmgxb4a hmgxb4,LOC102782297 coding downstream 8055 3529466 ~ 3541172 (-)
si:dkeyp-69e1.8 NA coding downstream 21853 3517924 ~ 3527374 (-)
s1pr5a s1pr5,LOC103393734,LOC104952115 coding downstream 141985 3403000 ~ 3407242 (-)
rtbdn rtbdn,LOC103364965 coding downstream 407517 3120685 ~ 3141710 (-)
mcm5 mcm5,LOC102783740,LOC106927661 coding upstream 13730 3575537 ~ 3594256 (-)
gcat gcat coding upstream 34491 3596298 ~ 3614844 (-)
tom1 tom1 coding upstream 55202 3617009 ~ 3632601 (-)
zgc:171844 LOC103359992,LOC107094641,LOC100711370,LOC102309406,LOC102193574,LOC101465794 coding upstream 81686 3643493 ~ 3656060 (-)
mfsd6l NA coding upstream 99304 3661111 ~ 3666455 (-)
G151515 NA non-coding downstream 26437 3522352 ~ 3522790 (-)
G151399 kri1,LOC102780649 non-coding downstream 168562 3375879 ~ 3380665 (-)
G151398 NA non-coding downstream 169689 3379186 ~ 3379538 (-)
G151376 NA non-coding downstream 221860 3327144 ~ 3327367 (-)
G151375 NA non-coding downstream 226748 3322193 ~ 3322479 (-)
G151521 NA non-coding upstream 47349 3609156 ~ 3651267 (-)
G151561 NA non-coding upstream 402241 3964048 ~ 3964411 (-)
G151615 NA non-coding upstream 493407 4055214 ~ 4112189 (-)
G151633 NA non-coding upstream 521111 4082918 ~ 4083681 (-)
G151639 LOC103360002,LOC100712452,LOC105013158,LOC102214151,LOC101470166,LOC106937022,LOC103143670 non-coding upstream 568997 4130804 ~ 4165498 (-)
G151344 smarca4 other downstream 232312 3311727 ~ 3316915 (-)
G151227 LOC103393680 other downstream 633860 2911326 ~ 2915367 (-)
G151216 LOC106957010,LOC107376217,LOC103393680 other downstream 652884 2873918 ~ 2896343 (-)
G151146 NA other downstream 743816 2399809 ~ 2805411 (-)
farsa farsa other downstream 1387503 2132732 ~ 2161724 (-)
LOC120575464 NA other upstream 800041 4361848 ~ 4367343 (-)
LOC120575466 LOC102292836,LOC101471904,LOC100692969,LOC103393382,LOC103468414,LOC102212070,LOC103143659,LOC102784177 other upstream 854370 4416177 ~ 4464991 (-)
LOC120574081 grin2b,fmc1,LOC102794452,LOC102794917 other upstream 1023366 4585173 ~ 4765493 (-)
G152043 cdc42ep1,LOC102301584,LOC102206375,LOC102078793 other upstream 1616509 5178316 ~ 5227241 (-)
G152114 rbx1 other upstream 1900039 5461846 ~ 5464418 (-)

Expression


Co-expression Network