st13 (st13)


Basic Information

Item Value
gene id st13
gene name st13
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 5466251 ~ 5478667 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824486.1
GGTCCAAACTCCCAGGGCCTCTAGCAGTCTGTCCGACAACTCGCCTGAATGAAAACACAGGAGCGACGCCACCACCAGTGAAGCAGCATTGAGGTGATAAAAATCAGCTGCAACCATCCTCTGCGGGgtttcttctcaggtttcaacGGTGTACATCTTTGTTCAGCGCGCTGTGTGCTGTACGTGACCGAGCAGCATGGACCCACGAAAAGTGGCAGAGTTAAAGGCCTTCGTGCAGATGTGCGAGTCCAATCCCCAAATTTTGCACCTTCCAGAGATGAGCTTCTTCCGGACTTGGTTGCTTGGAATGGATGCAACAATCCCTCCCCCAGCCAAGACAAAGGAGTCATGCCAGggtggctGTCCTTGTGGTCCTCCTCCTACATCAGCTCCAGCTCCTGAGCCGGAGCCTCCTGTACTGTCTACGAGTGAGGAGAGTGATATAGAAATAGACAAAGAGGGAGTGATCGAACCAGACACTGATGAACCACAGGACATGGGAGAGTTTGAAAACACTGAGGTCACAGAGGAGATGATGGACCAGGCCAGTGAGAAGAAGATGGCAGCCATTGATGCTCTCGGAGAAGGTGATCTGCAAAAAGCTCTGGATCTTTTTACTGAAGCCATCAAGCTGAACCCCTGCGTAGCCATCATGTACGCCAAGAGGGCAAGTGTCTTTATCCAGATGCAGAAACCCAACGCAGCCATAAGAGACTGTGACCGAGCCATCAGCATCAACCCAGACTCTGCACAGCCGTACAAGTGGAGGGGAAAAGCTCACAGGCTTCTGGGCCACTGGGAGGAGGCAGCCAAGGACCTGGCCACAGCTTGTAAACTGGACTATGATGAGGATGCCAGTATAATGCTGAAGGAGGTCCAGCCTAAGGCTAACAAAATCATCGAGCACAGACGCAAGTACGAGCgtaagagagaagagagggatgtCAAGGAGAAACAAGATCGGATAAAGAAAGCCAGAGAGGAGCATGCACGGGCTCAGAGGGAGGAGGAAGCACGACAGTTCGGAGGAGGATTCTTCCCAGGTCCTGCTGGATTCCCAGGCGGAGCCCCTGCTGGCATGCCTGGTCTCGGCGAACTCCTGAAGGATCCTGAGCTGCTTAATGCCATGAAGGACCCTGAGGTGATGACCGCCTTCCAGGATGTGGCACAGAACCCGGCCAACATCTCCAAGTACCAGAACAACCCCAAAATCATGGCGCTCGTCACCAAGCTGAGTTCCAAATTTGGAGCGTCACCACAGCCATAGACGGGACCGACCGAGGAAGAGAGGATACGTGGGGAAACTATCTGGAGAGCCACACTGCTTTTCAACTATTATTCCACCGTGTGCAGATCAAACAGGGGAGCAGGTGACGGGTTAATTGGTGTCATGTAGAGAAGGTGGGGCaactttttaaatgttcttaATCAGCCTGTTAGCACTTAGCAACGTCCCAACAAATCAACCCGATGGTTAGGCGTCAGGTCTGATAACCCCCACTGACTCCTCTCAGCGGGGACTTTACTAAACCACAGGTTGACATTTCTTATTAACCTGTATCTGAAAAAGCTAAACTGGAAGCTCCTgcatacaatttgttttttttacagccattcAATACTTTAGTTTAggttttttctttctccaaacATAGCCGAACTCTCACAAAGTGTCGCCACTTTTTGTAATCGGTCTGTTATtataaatgcaaaaaatattacTGATCATGATGTCTGACCCCGTTGGAAAATTATGATTTAATGATTCACAATAATAAAACCTCTGTTGCTTCAAAA
>XM_039824487.1
TTCCAGAAACTTCTGGATTGCGAACTTAACGACAAATAGCCAATAATGCTAATTGTGCATGGTTGCTTCATTGTTAGCCCCTCACCTTCACGTATTATTGAAGTGTGGAGTGAACAAAGCGCGCTGTGTGCTGTACGTGACCGAGCAGCATGGACCCACGAAAAGTGGCAGAGTTAAAGGCCTTCGTGCAGATGTGCGAGTCCAATCCCCAAATTTTGCACCTTCCAGAGATGAGCTTCTTCCGGACTTGGTTGCTTGGAATGGATGCAACAATCCCTCCCCCAGCCAAGACAAAGGAGTCATGCCAGggtggctGTCCTTGTGGTCCTCCTCCTACATCAGCTCCAGCTCCTGAGCCGGAGCCTCCTGTACTGTCTACGAGTGAGGAGAGTGATATAGAAATAGACAAAGAGGGAGTGATCGAACCAGACACTGATGAACCACAGGACATGGGAGAGTTTGAAAACACTGAGGTCACAGAGGAGATGATGGACCAGGCCAGTGAGAAGAAGATGGCAGCCATTGATGCTCTCGGAGAAGGTGATCTGCAAAAAGCTCTGGATCTTTTTACTGAAGCCATCAAGCTGAACCCCTGCGTAGCCATCATGTACGCCAAGAGGGCAAGTGTCTTTATCCAGATGCAGAAACCCAACGCAGCCATAAGAGACTGTGACCGAGCCATCAGCATCAACCCAGACTCTGCACAGCCGTACAAGTGGAGGGGAAAAGCTCACAGGCTTCTGGGCCACTGGGAGGAGGCAGCCAAGGACCTGGCCACAGCTTGTAAACTGGACTATGATGAGGATGCCAGTATAATGCTGAAGGAGGTCCAGCCTAAGGCTAACAAAATCATCGAGCACAGACGCAAGTACGAGCgtaagagagaagagagggatgtCAAGGAGAAACAAGATCGGATAAAGAAAGCCAGAGAGGAGCATGCACGGGCTCAGAGGGAGGAGGAAGCACGACAGTTCGGAGGAGGATTCTTCCCAGGTCCTGCTGGATTCCCAGGCGGAGCCCCTGCTGGCATGCCTGGTCTCGGCGAACTCCTGAAGGATCCTGAGCTGCTTAATGCCATGAAGGACCCTGAGGTGATGACCGCCTTCCAGGATGTGGCACAGAACCCGGCCAACATCTCCAAGTACCAGAACAACCCCAAAATCATGGCGCTCGTCACCAAGCTGAGTTCCAAATTTGGAGCGTCACCACAGCCATAG

Function

symbol description
st13 Predicted to enable heat shock protein binding activity. Predicted to be involved in chaperone cofactor-dependent protein refolding and protein-containing complex assembly. Orthologous to several human genes including ST13 (ST13 Hsp70 interacting protein).

NR:

description
PREDICTED: hsc70-interacting protein

GO: NA

KEGG:

id description
K09560 ST13; suppressor of tumorigenicity protein 13

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824486.1 True 1797 mRNA 0.50 13 5466251 5478667
XM_039824487.1 False 1220 mRNA 0.52 13 5466781 5478371

Neighbor

gene id symbol gene type direction distance location
LOC120575348 NA coding downstream 28888 5416137 ~ 5437363 (-)
tefb LOC106601241,LOC106607162,LOC107091051 coding downstream 52272 5399023 ~ 5413979 (-)
LOC120574211 aco2,LOC103370792,LOC105918004 coding downstream 81407 5367065 ~ 5384844 (-)
polr3h polr3h coding downstream 99501 5360457 ~ 5366750 (-)
LOC120575093 LOC104932054,LOC103370794,LOC101074219,LOC100695912,LOC101476535 coding downstream 107420 5350169 ~ 5358831 (-)
cbx7a NA coding upstream 55189 5533856 ~ 5541201 (-)
tnrc18 tnrc18 coding upstream 183194 5661861 ~ 5717548 (-)
actb2 actb,LOC102799139 coding upstream 247219 5725886 ~ 5730322 (-)
rnf216 rnf216,LOC107591749,LOC106595856 coding upstream 315440 5794107 ~ 5818120 (-)
smurf1 smurf1,LOC102787679,LOC103393300 coding upstream 342959 5821626 ~ 5840646 (-)
G152107 NA non-coding downstream 18194 5446503 ~ 5448057 (-)
G152104 tob2 non-coding downstream 71136 5390505 ~ 5395115 (-)
G152081 NA non-coding downstream 175890 5287858 ~ 5290361 (-)
G152052 NA non-coding downstream 295599 5170304 ~ 5170652 (-)
G151951 NA non-coding downstream 442159 5013517 ~ 5024092 (-)
G152233 ep300 non-coding upstream 30050 5508717 ~ 5509392 (-)
G152249 pdap1,LOC102785718 non-coding upstream 104712 5583379 ~ 5587735 (-)
G152256 NA non-coding upstream 122646 5601313 ~ 5606088 (-)
G152270 NA non-coding upstream 181419 5660086 ~ 5660898 (-)
G152280 NA non-coding upstream 259264 5737931 ~ 5783361 (-)
G152114 rbx1 other downstream 1833 5461846 ~ 5464418 (-)
G152043 cdc42ep1,LOC102301584,LOC102206375,LOC102078793 other downstream 239010 5178316 ~ 5227241 (-)
LOC120574081 grin2b,fmc1,LOC102794452,LOC102794917 other downstream 700758 4585173 ~ 4765493 (-)
LOC120575466 LOC102292836,LOC101471904,LOC100692969,LOC103393382,LOC103468414,LOC102212070,LOC103143659,LOC102784177 other downstream 1001260 4416177 ~ 4464991 (-)
LOC120575464 NA other downstream 1098908 4361848 ~ 4367343 (-)
top3a top3a,LOC102783137 other upstream 70624 5549291 ~ 5567539 (-)
atp5mf atp5j2,LOC102786280 other upstream 96013 5574680 ~ 5613722 (-)
bud31 bud31,LOC106595689 other upstream 101596 5580263 ~ 5582864 (-)
LOC120574101 NA other upstream 513270 5991937 ~ 5995189 (-)
G152441 LOC104944083,LOC103371237,LOC107087166,LOC105933549,LOC100701083,LOC101478422 other upstream 703741 6182408 ~ 6228114 (-)

Expression


Co-expression Network