xpo6 (xpo6,LOC102794690)


Basic Information

Item Value
gene id xpo6
gene name xpo6,LOC102794690
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 8973823 ~ 8998370 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824494.1
AAGTTGAGAAACAAACCCTATGAGCAAACCCTGTAACCAGAAGCTAGCTAGTTGTATTCTTCAGCCGCCCTCAGCATTGAGAAGGGGAATAACAGGAACAAGCGCGCATAGTATTATATATTTAGTGTTATTACAAATGCGTCAGATGTATAACTTAAGTGTGCATATTCACCCGCTTTGAAGTTACAAACGGTAAAGGCAAATTGTCGCGACCAATAGCCGTTGAAGCATGTCGACGTTTGACAGAATGCTTTCATCCTTCTAGAAAAGCTAGCGAGTTAGCCATCCGCTGCAACGTTAGCAGCTGGGTAACTCAGCTTCGAACCGCTTGACAGAGAAAGCCAATTAACGTTGCACATTTCTCCGGTGCTGCAGCCACGTTAGATTTTCCACTAAACATATTTCTATATTTAACCTGACGGTAAATGGAAATTACACGACAATGCAGCTAGCTAACTCATCAATTCGAGATAGCTGATTTAATCTTAAGCCTTTAGCAATGCTTGGTaagcgaaaacacgttttattcgAGCAAGGTAAAATTTTGCTGTGTGTTTAACGTTTGTTATTGTAAGCACAGTCAACGACGCCAACCTTTGCTAGCTAGTTTTGTGTAGAGTATCGACCGAAGCAGGCGAGCAGACCATGATGAGCCCCCTCTGCGGTTACGTTAGCCAGCAACacctaagctaacgttagctagctacagaatTGGCTAGCTAGAGAGCTAATGTTGGCTTATTAGTGAAATTAATTCGAGAACAAGTAAACTGAAGAAAGCATCTGAGCCAGCTAAACATGGCTTCAGAGGAGGGATCACTGCGTGCACTGGAGAGCCTTATGACTGAGTTCTTTCACAGCTGCACAACCAATGAGCGGAAGAGAGAAATAGAAGAGCTGCTGAATAACTTCGCACAGCAGACTGGAGCGTGGCGCCACTGCTTGTTCTTTCTCTCCAATACTCGGAATGAGTATGTAATGATGTACAGCCTCACAGTTTTTGAAAACCTGGTAAACAAGATGTGGATTGGAGTGGCTTCACAAGACAAGATGGAGATTCGCAGCTGTCTGCCCAAACTCCTACTTGCTCAACACAAATCGGTGCCCTATTTCATCCGTAACAAACTGTGCAAAGTTATCGTCGACATTGGTCGCCAGGACTGGCCGATGTTCTACCATGATTTCTTTACAAGCACCCTTCAGTTGATCCAGTCCCCAGCTCTGGCTCCATTGGGCTTGATGATGTTAAAAACCACATCAGAGGAACTTGCGTGTCCTCGAGAAGACCTGAGTGTCGCCAGGAAAGATGAGCTGCGTAAACTGCTGCTGGAGCAGGTACCGACAGTGCTTGGACTGTTGACAGATATTCTGGAGACCTATTGGGACAAGCACAGTGTCATAGCTTCCACCCCGCCTCCCTCACCCACCTCAGGGGAAAGTGTGGAATTGCTGGGCAGTTTGTTTCAGGGCAGCCAGTACTCAAAGCTGCTTTGCCAGCCCATGGCAGCATTGGACAATGAGAGTCAGCAGCTCTGTTGTCTCGTTTTGGAGTGTTTGGCTCACCTGTTCAGCTGGATCCCTCTGTCCACAAGCATCACACCCACCCTGCTGGCATCAATTTTCCATTTTGCACGTTTTGGTTGTGATCTTCGGACAAAGGCCAAGACAGGATGCTTCATTTCCTcaaactcctcctcctctaatGGTCAGCTTAATCCTGGGACAATGCTACCAACATCGAATGGAGGAGGGCGAAATGGACAACAGAGTGAGGGCAACAAGGTGGATCGTGCCCGGCTTGGTGTACTCGCCATGACCTGTGTCAACGAGCTTGTGTCAAAGAACTGTGTGCCAATGGATTTTGAGGAGTACCTGCTGCGCATGTTCCAGCAGACCTTCTTTCTCCTGCAGAAGCTGACACGAGAGAATAACGCCCATACCATCAAGAGCCGCCTACAGGAACTTGATGAGAGTTACTTGGAAAAGTTCACAGATTTTCTGCGCCTGTTTGTCAGTGTTCACTTGAGGCGGATTGAGTCCAGTCCTCAGTTTCCAATTGTAGAGTTTCTTGGCCTGCTTTTCAAGTTCACCTTCAACCAGCCTACCCATGAAGGCTACTTTGCCTGTTTGGATATATGGAGTGTCTTTTTGGATTTTCTAACAACCAAAATCAAAAGCAGACTCGCTGACCGAGAAAGTGTTCTAAATAGGTACAAAGATGCCTTAGTTATGCTATTGAGGGAAGTTCTGAATCGCATACAGTTCAGATACAATCAGGCCCAGTTAGAAGAGCTGGATGATGAGACTCTGGATGATGATCAACAGACCGAGTGGCAAAGGTACCTGCGTCAGAGTCTGGAGGTGGTAGCCAAGGTGATGGAGCTGCTCCCATCCCATGCTTTCTCTACTTTGTTTCCAGTCCTCCAAGATAATTTGGACGTATACCTGGGTTTGCAGCAGTTTATTGTCACCAACGGCACAAATCGGAGGCTTAATATCTCTGCAGAGAATGATTGCCGTCGACTTCACTGTTCTCTCAGGGACCTCAGCTCTCTACTTCAAGCTGTCGGACGCTTGGCTGAACATTTCATTGGGGAAGTTTTTGCTGCACGTTTCAATGACGCCCTGGTAGTGGTGGAGAGGTTGGTTGAAGTGACTTGCTACGGCTCTCAGACCAGCCTTTATGACCTGGAGACCGCTGTGCCTTCTGTGCTCAAGCCAGACCTCATTGACGTACACGCACAAGCCCTTGCTGCTTTGCAAGCCTACTCTCATTGGCTTGCACAGTTCTACAGTGAGGTCCACAGTCAAAACCAGAGCCAGTTCATGAACCTCATCACATCGACAATAGATGCCAGTAGCCCACTCATCACAGCAAAGgTACCTGAAAAGTTGCTGCTCTCAGCATGTCATCTGATGGTTTCCATCACCTCTACAGTGAGGCCTGTGTTCTTGGTCACTTTGCCAGCTGTTCGGAACATCTTCAACCTCATTACTGCAGAGAATCAGACCCGCAGACTTCCCCAAGAGGCTCACATGTTGGTGTGTAGGGCTTTGTCCAACATGCTGCTTCTGCCGTGGCCGAATTTACCCGAGAGTGAGCAGCAGTGGCAAACCCGCTCCAGCAACCATGCCAGCCTACTGGCAGCACTCACTCGTGAATATAAGGGAATAAGAGGGACAGTAAACATTACTCCACGGCAACCCGATCTGAATAACATGAAAGCGGTGATACAGCAGACCCTGCCTGTGCTTAGAGACGTAGTGGACAGCATTTCTGGGGAATCCACCAAATCACGTCAGATCTGTTACCAGAGTCTTCAGGAATCTGTCCAAGTGTCCCTCAGCCTCTTCCCAGTGTTTATTCAGCAGCCAGATGTGACAGACGAGATGTTGGCCTTCTTCTTGACGCTGTTTCAGGCGTTGCGAGTCCAGATGGGTGTTGCCTTTACAGGACAGATTATTCACACTTTCCTCAGCATGTTCaccagGGAACAGCTGGCAGCCAGTATTTTGCAAGAGGGCAGTGCGGGGTGTAGAGTCGTACAGAAGTTCCTGAAAATCCTGCAGGTGGTGGTGCAAGAGCCTGGTCAAGCTTTCAAGCCCTTCCTACCCAGCATCCTCTCTCTGTGCATGGAGCAGGTTTACCCAGTTGTGGCAGAGAGGTCTTCCCCAGACGTCAAGGCTGAGATGTTTGAGTTGCTATACCAAATACTTCACCAAAACTGGAGGTACTTCTTTAAAACGTCAGTGTTAACAAGTGTCCAAAGAGGAGCTGCTGAAGAGACCATGGAAAATGAGGCCCAGTTCACAGCTGCTATGCAGGCTTTTGGACAGTCTTTCTTGCAGCCTGACATCCACCTCTTCAAGCAGAATATCTTCTATTTGGAGTTACTCAACAGCAAGCACAAGTTGTATCACAGAAAGCTTTTCCGGACCTCGATGCTCTTCCACTTCATCAACGTGCTGCTGCAGGTCCTTCTCCACAAAAGTCACGACCTTCTTCAGGAGGAAATCACCCTTGCTATTTACAACATGGCCTGTGTGGACTTTGATGCCTTCTACTCTGCCTTCATGCCAGAGTTCCTCAATGGCTGCCAGGGTGTGGACACCAGCCAACGGGCTGTTCTCGCACGCAACTTCAAGCTTGAACGGgaCTTGCCTTCATTCACTCAAAGCGTGCAGCGGCTGGTGAATGACCTTCGCTACTACAGACTGTGTAATAGTAGCCTGCCGACTGGCACCATCAAGCTATAGCACGCACGACTGCTGGAACCACTCCACACATCAACTATGATCTTCAAGGACTGCCTGTGCTGACCACTTTGCCCAACACTCCTACTCCAATCCAGCTTTGCTCCGTCTATTCAAAGTAATCGGAAGGAACAACACCCATCGTATTGTTGAGTAGTTGGAGGTTGAGGATGCTGCTGATGTTTCTCTTTGATCTCTACTGTAGAAGGTTGGcgcgttattttttttaaagcagcgcCCGCCTAATGTGTTGCCAATGATAATTTGGCAAGAAATGTAAACCTGGTCTGCAGTTGGCTTTTGCCCAGACCTAGAGCAGTCTGAGCCAGGCCTTCTTTCCCATACGTCCAGAACAAAGCTGGACTGGGACTGAGCACTTTGAACTCATTTTGAGTTTTTAATATGTCTGCTTTTATTCATTTtgcctttaatttttttcatctCCAAAGGAGACAGACTCTCAACTTAAGATCTTTCATATCATTCCATTCTGAAAAAGTGAAAATCTGCTTGATTAATAAAGTGCTTTTTTTTAGTAAAACTCACTCTTGCAGTGGTTTGTAAGAATAATGGTTGTATTGAGAGATTCATAGGCTTGTCTGTATGTTTACACTGTTTTGCTTTACACTTGTCAATGGCATCTTTTTAAAATTCCTTTTTAACTTAAATACGTCTACTTAACTGCTGAATAATTGTTTAGGCCTTGAATTGTttaacacatgcacaaataatCAAATAGTTTGTTTAGGTCTTTACAGAGCCAATGGATAATGGCGATTTTAATTGTGAGAATTGCTAAAGCTTTTGACAGAATGCGAAGCATCAACATGTGACAAATGCTGCGTGAGGACGCAGCATGCAGAAGAAAGGAAGCGTCAGCGTAGAAAGAATAATTAAAACAGTAATGATGAGGTGAAACAACTACACCAACACATGTTGCATtaccttttcttttgtttgagtTCACGGTGAGGATTGAAGCTCAACGTTGGTGTATGTCTATCAGGGCTTCTAGTAGCTTTGAAGCTTTTCTTTGGCTGCTGTCTTAATACTGAAGGCAAATGCTTGTTCAGTTAGGATGGTAGGTAAACCTACATAGTAAAGCTATGCAATTGGTGGATATTGCAGTACAGGCTGTAAATTCATGTGACACAGAACAGCCTACAAATTGAACATAATGGATTTGATCGTTCGACTCCCTCAATTTGATAAGATCTTGTTTTTGGCTCAAAATCTAATGTTTATGCTAATTATTTACTAGTTATGTcttgaatgaatgtaaaacGAATATAAATGTTATTGTAAGATATTAGGCTTCCAATAAGTGCCGATAGAACTTTTACAGACTAACTGCATTGAAGATTAacctaaaatgttttgaaatcCCTAGATTTTCATATTTGTGGTTTAGGGCATTCCACCAATTTTACACCTCAAGACATTATTTttcatgattattattattattattgggtaTTTTTAaagcctttaaaaaaagttgtatgTCTTCTATGGCTGTCAAGTCTGTAACAACAACCCTAACCTGCTGTACAATGTTTGGAACTTGGAGTGTTTAAGACACTagtgagttgcattatgggaagtgtaggatccATCAGTTTTGgagcaaaaagaaaaagggtcAAAAATGCTTCTGGGGTATtgaatttttttcctttttttttgtttgtttcttccaAGTCCACCAACACAAAATTGTGGTTGACCTTAAAGTTTGAATATGCTGTAAAACTTGAATGTTATCAAAGCTCTGTTGGTAAAAATTGAATTGCAGGATCAGTGTGTTTATTATTAAATCCAAGGATGGAGTTATACATCG

Function

symbol description
xpo6 Predicted to enable nuclear export signal receptor activity. Predicted to be involved in protein export from nucleus. Predicted to act upstream of or within intracellular protein transport. Predicted to be located in cytoplasm and nucleus. Orthologous to human XPO6 (exportin 6).

NR:

description
exportin-6 isoform X2

GO: NA

KEGG:

id description
K25204 XPO6, RANBP20; exportin-6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824494.1 True 6094 mRNA 0.45 24 8973823 8998370

Neighbor

gene id symbol gene type direction distance location
nme4 LOC104945280,LOC106931198,LOC106951632,LOC108242919,LOC100703020 coding downstream 175 8969882 ~ 8973648 (-)
slc6a16a LOC103374926,LOC104930347,LOC104945282 coding downstream 18537 8943059 ~ 8955286 (-)
slc17a7a LOC104930346,LOC103374936,LOC102793338,LOC101484681,LOC100693903 coding downstream 31506 8924601 ~ 8942317 (-)
LOC120573900 NA coding downstream 59319 8909947 ~ 8914504 (-)
gys1 gys1 coding downstream 92670 8866586 ~ 8881153 (-)
antkmt LOC103374876 coding upstream 510 8998880 ~ 9003151 (-)
hirip3 NA coding upstream 4895 9003265 ~ 9010931 (-)
kctd13 kctd13,LOC104945278 coding upstream 12853 9011223 ~ 9018740 (-)
sez6l2 sez6l2 coding upstream 21716 9020086 ~ 9036828 (-)
cabp5b LOC104945275,LOC103374841,LOC100700336,LOC104930357 coding upstream 45043 9043413 ~ 9048123 (-)
G153137 NA non-coding downstream 197557 8700109 ~ 8776266 (-)
G153139 NA non-coding downstream 289070 8659611 ~ 8684753 (-)
G153143 NA non-coding downstream 326532 8647083 ~ 8647291 (-)
G153142 NA non-coding downstream 328798 8644784 ~ 8645025 (-)
G153130 atp2a1 non-coding downstream 357711 8612277 ~ 8616112 (-)
G153274 NA non-coding upstream 62926 9061296 ~ 9111224 (-)
G153275 NA non-coding upstream 66626 9064996 ~ 9085687 (-)
G153455 NA non-coding upstream 198388 9196758 ~ 9203859 (-)
G153456 NA non-coding upstream 201288 9199658 ~ 9501467 (-)
G153462 NA non-coding upstream 221229 9219599 ~ 9219903 (-)
zgc:55558 p-ras,LOC105029053,LOC104950842,LOC104930345,LOC103392975,LOC101069736,LOC106606379,LOC103023536,LOC108413997 other downstream 66161 8895782 ~ 8907662 (-)
tufm tufm,LOC106606342,LOC101070424,LOC106606341,LOC106931188,LOC103145412 other downstream 116252 8850443 ~ 8857571 (-)
natd1 natd1 other downstream 157518 8812330 ~ 8816305 (-)
G153172 mrps34,LOC102799846 other downstream 240804 8731397 ~ 8733019 (-)
G152952 NA other downstream 529442 8441179 ~ 8444381 (-)
LOC120574599 NA other upstream 188880 9187250 ~ 9204006 (-)
LOC120574343 NA other upstream 191014 9189384 ~ 9190066 (-)
LOC120574654 NA other upstream 193616 9191986 ~ 9192402 (-)
LOC120574662 NA other upstream 218699 9217069 ~ 9224455 (-)
LOC120574348 NA other upstream 222171 9220541 ~ 9221090 (-)

Expression


Co-expression Network