nme4 (LOC104945280,LOC106931198,LOC106951632,LOC108242919,LOC100703020)


Basic Information

Item Value
gene id nme4
gene name LOC104945280,LOC106931198,LOC106951632,LOC108242919,LOC100703020
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 8969882 ~ 8973648 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824495.1
GTTTACTTTCCTCTCTACAGGCTGACAAACGCACGTCAAAACATGGTCATGTTGCAGCGGTGCATTTTGAAGAAATGTCTCCAACAGTTTTATTTAGGGAATCAAGAAACCACTAAAAGTCTGCTATCAGCTGGGTTTCCCACTGCGCTTCTGGGTGGACACCGAGCTGCTGGGCACAGGAGCAAATCAAGTGTTCCAGATGTAAGGGAGCGGACTCTTATTGCTGTAAAGCCAGATGGAGTTCAACGTCGTCTTGTGGGACAAATAATTCAGCGGTTTGAGCAGCGGGGCTTCAAGCTGGTTGGCCTGAAAATGTTGCAGGTGTCTGATGATCTCCTGTCTCAGCACTACTGTGAACTGAGGACTAAGCCCTTCTATCCTAGGCTGCTGCATTACATGACCTCAGGGcctgttgttgccatggtGTGGGAAGGGCACAAAGTAGTCCAGACGTCGCGTATGATGGTGGGACATACTAACCCAGTGGAGGCCCAGGCAGGCACAGTCAGAGGAGATTTCAGCTTTCATGTCAGCAGGAACGTAGTCCATGCCAGTGATTCACCAGAGGGGGCACAGAGGGAGATCCAGCTGTGGTTTCAGAGAACGGAGCTCCTGAACTGGGACTGCTGTGACCAGACCATGACCTGTGAAGTGTGAAGACTCTGCGAGCCGGAAACAGTGAGAATCAGTAGCCTAATACTACCTCTTCTCTTGCGGCTCAGAGGTCTGTTTCTTGTGACTACAGGGATTAAAAAAGATGAGTCATATTCAGTTTTCCTACCAAATAATGTACCTCAGTAAGTGCACTTATGGTCACAATCAGTCTAAATAGCTAGTGGTCTGGACAGTCTAAACTGCTATAAAGTTACAATTTACTTTGTCTAAATCAAATTTTATTACCAAAAGGTAATTACAAAGTAAGAtctaatttgatttaaaaagaacTGACTTTCACCCCGCTGCTCTGCTGTATAATGATCAGCTCCAGCAGGCTAATAGATTCACAAATAATTGTGTTaatattataacttttttcatcacagagagaaaaaatcTTTAAGTGGCGGAAATCCCTTTTTTGACAATATTATAGGACATTTTGACAAAGCCTTGTtgtgaaataataataagtaatatgtaaaatgttgtatactttattttttgtttaacaaATTATATGTAGTAGTGTTGTTTTGGGAGTAATGTGTTTACTTGAGCTATGTCCTCAAATACTGTGTAATaaataagtgtaataataatacttgACTGAAATTGTAACCAAGTACTATTGTAAAACTGAAATTGTTAAGTAATCATTCTACTTTTTTAAAAGACGATAGAAATTAAATAAGAGGAAAAGAAATAACAGTTTTAAGTGCAAACCTTGGCAGGAGTTGTCTGAAATAGTAATAGTTGTTCGTAGTTCAGCCAAAATCAAATAATCACTGTTTACATTAGAACATTTGACCTCTGAAGAGTTATTTGTAAAATGTGCTGGTGCTGTCAGTGTAAAAATTAAGGAAGTAacatgatgatatgatgataaATGATTCAGTTGACAtcttcagtgtcacttttgtaATCAATCATACAGCGGAAGAAAATAATTTAGTCTGTTGCACATAATATCAATTATGGAAATACTTATTAAGCATTCTTctcataatttaaataaaagtgaTTACTTTGATCATATAACTTGTCTATGTCAGAATACGGAAAGAAGGGTTGCAGTAAACTCACAGATATGATACAAAAATACACATCATTTAAGTTCTATTTAAGCCAATACATTGACAGCAATTTATCACGTATGTTACTGTGTTGTACATTATGTCATGATATAAGCCACAGCTAAAGtcacaatgaaaaaaaa
>XM_039824496.1
tttagATTTAATGAATATATAACTGTTCGACATGCTTGGCACACAGTCAAAGAGACTTTACCTCCGAGGCTCAACGTTCAGCCTATTTGTTTAAACTTAACGGGGGCGTTTGCGAAATCAAATTCGCTTGCCAAACTCATGGGGTCATGAACTGGAAATAGGTTAGCGACACAGGAGatactgatgatgatgagggtAACAGCGATGCTTGAGAAACAGTGACCTGCGGTGTGCGTAATCGTGCCAAAGCCAGTGCGCATTCTGCGTAATGGACGAGGCACAGTACCATGTAGCCTACGACACCCGAACATTTTTCTCAGGAGGAAACTTCCATACAGTGTTCCAGATGTAAGGGAGCGGACTCTTATTGCTGTAAAGCCAGATGGAGTTCAACGTCGTCTTGTGGGACAAATAATTCAGCGGTTTGAGCAGCGGGGCTTCAAGCTGGTTGGCCTGAAAATGTTGCAGGTGTCTGATGATCTCCTGTCTCAGCACTACTGTGAACTGAGGACTAAGCCCTTCTATCCTAGGCTGCTGCATTACATGACCTCAGGGcctgttgttgccatggtGTGGGAAGGGCACAAAGTAGTCCAGACGTCGCGTATGATGGTGGGACATACTAACCCAGTGGAGGCCCAGGCAGGCACAGTCAGAGGAGATTTCAGCTTTCATGTCAGCAGGAACGTAGTCCATGCCAGTGATTCACCAGAGGGGGCACAGAGGGAGATCCAGCTGTGGTTTCAGAGAACGGAGCTCCTGAACTGGGACTGCTGTGACCAGACCATGACCTGTGAAGTGTGAAGACTCTGCGAGCCGGAAACA

Function

NR:

description
nucleoside diphosphate kinase

GO:

id name namespace
GO:0006165 nucleoside diphosphate phosphorylation biological_process
GO:0006183 GTP biosynthetic process biological_process
GO:0006228 UTP biosynthetic process biological_process
GO:0006241 CTP biosynthetic process biological_process
GO:0005524 ATP binding molecular_function
GO:0004550 nucleoside diphosphate kinase activity molecular_function

KEGG:

id description
K00940 ndk, NME; nucleoside-diphosphate kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824495.1 True 1876 mRNA 0.38 5 8969882 8973648
XM_039824496.1 False 825 mRNA 0.50 5 8971080 8973255

Neighbor

gene id symbol gene type direction distance location
slc6a16a LOC103374926,LOC104930347,LOC104945282 coding downstream 14596 8943059 ~ 8955286 (-)
slc17a7a LOC104930346,LOC103374936,LOC102793338,LOC101484681,LOC100693903 coding downstream 27565 8924601 ~ 8942317 (-)
LOC120573900 NA coding downstream 55378 8909947 ~ 8914504 (-)
gys1 gys1 coding downstream 88729 8866586 ~ 8881153 (-)
tmem86b LOC103374980 coding downstream 107056 8861162 ~ 8862826 (-)
xpo6 xpo6,LOC102794690 coding upstream 175 8973823 ~ 8998370 (-)
antkmt LOC103374876 coding upstream 25232 8998880 ~ 9003151 (-)
hirip3 NA coding upstream 29617 9003265 ~ 9010931 (-)
kctd13 kctd13,LOC104945278 coding upstream 37575 9011223 ~ 9018740 (-)
sez6l2 sez6l2 coding upstream 46438 9020086 ~ 9036828 (-)
G153137 NA non-coding downstream 193616 8700109 ~ 8776266 (-)
G153139 NA non-coding downstream 285129 8659611 ~ 8684753 (-)
G153143 NA non-coding downstream 322591 8647083 ~ 8647291 (-)
G153142 NA non-coding downstream 324857 8644784 ~ 8645025 (-)
G153130 atp2a1 non-coding downstream 353770 8612277 ~ 8616112 (-)
G153274 NA non-coding upstream 87648 9061296 ~ 9111224 (-)
G153275 NA non-coding upstream 91348 9064996 ~ 9085687 (-)
G153455 NA non-coding upstream 223110 9196758 ~ 9203859 (-)
G153456 NA non-coding upstream 226010 9199658 ~ 9501467 (-)
G153462 NA non-coding upstream 245951 9219599 ~ 9219903 (-)
zgc:55558 p-ras,LOC105029053,LOC104950842,LOC104930345,LOC103392975,LOC101069736,LOC106606379,LOC103023536,LOC108413997 other downstream 62220 8895782 ~ 8907662 (-)
tufm tufm,LOC106606342,LOC101070424,LOC106606341,LOC106931188,LOC103145412 other downstream 112311 8850443 ~ 8857571 (-)
natd1 natd1 other downstream 153577 8812330 ~ 8816305 (-)
G153172 mrps34,LOC102799846 other downstream 236863 8731397 ~ 8733019 (-)
G152952 NA other downstream 525501 8441179 ~ 8444381 (-)
LOC120574599 NA other upstream 213602 9187250 ~ 9204006 (-)
LOC120574343 NA other upstream 215736 9189384 ~ 9190066 (-)
LOC120574654 NA other upstream 218338 9191986 ~ 9192402 (-)
LOC120574662 NA other upstream 243421 9217069 ~ 9224455 (-)
LOC120574348 NA other upstream 246893 9220541 ~ 9221090 (-)

Expression


Co-expression Network