tmem11 (tmem11)


Basic Information

Item Value
gene id tmem11
gene name tmem11
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 8807234 ~ 8810350 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824553.1
AGTCACAGTCACAGCATTTAGGTTCAGCTGATCTCATATTCTTGAACGTAGCTTTTTAAAGTCGTTACATCAAAAGCGCTTCGGGTTACACGGCACGCGGACAGGGAGCCCATACTTGAGCACggtgacacagagacagagcacAATATGGCTTCATGGGAATAGTAGTCCTCATTCAAGTCGAAGTGATGCGCCGACTGCCTTGACACACTACATTACCCAGAAGGCTTGGTGCTCTCATACGTCAACTGCAATCACGGTTGTATCTCCAACATGGCGTCGCTGGGAAGGAGGCGCGGTGTCCCAGTAAGCAGGGAGAGGGGAGTGATGGCGGCGACAGACTGCTACATTGTGCACGAGATCTATAACGGGGAAAATGCGCAGGACCAGTTTGAGTACGAGCTGGAGCAGGCGCTGGAGGCCCAGTATAAATACATTGTCATCGAGCCCACCCGCATCGGAGATGAAACGGCCCGTTGGATTACCGTGGGCAACTGCCTGCACAAGACGGCCGTGTTGTCAGGTGCTGCTTGCCTCCTGACGCCACTTTCACTGCCTGTTGAATACTCGCGCTATGTGGCGTTGCCCGCTGGCGCCCTCAGTGTGGCCTGCTCTGCCCTCTATGGGATTTCATGGCAATTTGATCCCTGCTGCAAGTACCAGGTGGAGTACGACAGCCAAAAACTCTCGCGGCTGCCCCTGCATACACTCACCTCCTCGACGCCCGTGGTGTTGGTACGCAGAGATGACGTCCACAGAAAGAGACTCCATAATACGATAGCACTGGCTGCCCTGGTGTATTGCGCCAAGAAGATCTACGAACTCTATGCGGTATGAGTGCACTCTGAAGAGGGTTTAAGAACCAacagaaaaaaggaagaaaaaaaaaacagaacctATCCACCCCCCCGATGTAAGAAAAGTGGAAGTCACGATCAGGCCCAGCAGTTAGCTCCTCACATGGTGGGTGCTTCCATTTTGAACTATGATCAGAGGGATATAGTTAAAACTAGAAggaattgttttttctttttctttacttctaTGTGACAACGACAGCACACTTATCTCTGTAGTACCCTTGCGCCTCCTCCCCTGCGCCCTCCACCTGCATCCTTGACACACAAGCAAGTGCACAAGGGTATGGCAGCAGTTCATCTGGATTGAATTGTATTGCAATTGAAACGGACCGACCTGTGTTGGGTACCGAGCTCTTTCCCCTTTCCCTCGTAATTTTACTGTACCCCTCTCTTGCTGATCATTACATCACCCTTTCATTAAACATTAGAATATTTCAAACTAA
>XM_039824554.1
TGTAGTCACAGTCACAGCATTTAGGTTCAGCTGATCTCATATTCTTGAACGTAGCTTTTTAAAGTCGTTACATCAAAAGCGCTTCGGGTTACACGGCACGCGGACAGGGAGCCCATACTTGAGCACggtgacacagagacagagcacAATATGGGGGAGTGATGGCGGCGACAGACTGCTACATTGTGCACGAGATCTATAACGGGGAAAATGCGCAGGACCAGTTTGAGTACGAGCTGGAGCAGGCGCTGGAGGCCCAGTATAAATACATTGTCATCGAGCCCACCCGCATCGGAGATGAAACGGCCCGTTGGATTACCGTGGGCAACTGCCTGCACAAGACGGCCGTGTTGTCAGGTGCTGCTTGCCTCCTGACGCCACTTTCACTGCCTGTTGAATACTCGCGCTATGTGGCGTTGCCCGCTGGCGCCCTCAGTGTGGCCTGCTCTGCCCTCTATGGGATTTCATGGCAATTTGATCCCTGCTGCAAGTACCAGGTGGAGTACGACAGCCAAAAACTCTCGCGGCTGCCCCTGCATACACTCACCTCCTCGACGCCCGTGGTGTTGGTACGCAGAGATGACGTCCACAGAAAGAGACTCCATAATACGATAGCACTGGCTGCCCTGGTGTATTGCGCCAAGAAGATCTACGAACTCTATGCGGTATGAGTGCACTCTGAAGAGGGTTTAAGAACCAacagaaaaaaggaagaaaaaaaaaacagaacctATCCACCCCCCCGATGTAAGAAAAGTGGAAGTCACGATCAGGCCCAGCAGTTAGCTCCTCACATGGTGGGTGCTTCCATTTTGAACTATGATCAGAGGGATATAGTTAAAACTAGAAggaattgttttttctttttctttacttctaTGTGACAACGACAGCACACTTATCTCTGTAGTACCCTTGCGCCTCCTCCCCTGCGCCCTCCACCTGCATCCTTGACACACAAGCAAGTGCACAAGGGTATGGCAGCAGTTCATCTGGATTGAATTGTATTGCAATTGAAACGGACCGACCTGTGTTGGGTACCGAGCTCTTTCCCCTTTCCCTCGTAATTTTACTGTACCCCTCTCTTGCTGATCATTACATCACCCTTTCATTAAACATTAGAATATTTCAAACTAA

Function

symbol description
tmem11 Predicted to be involved in inner mitochondrial membrane organization. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane. Predicted to be integral component of mitochondrial inner membrane. Orthologous to human TMEM11 (transmembrane protein 11).

NR:

description
PREDICTED: transmembrane protein 11, mitochondrial isoform X1

GO:

id name namespace
GO:0007005 mitochondrion organization biological_process
GO:0031305 integral component of mitochondrial inner membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824553.1 True 1303 mRNA 0.50 3 8807234 8810347
XM_039824554.1 False 1137 mRNA 0.50 2 8807234 8810350

Neighbor

gene id symbol gene type direction distance location
dhrs7b dhrs7b coding downstream 1382 8799475 ~ 8805852 (-)
jpt2 hn1l coding downstream 28472 8772864 ~ 8778762 (-)
mapk8ip3 mapk8ip3 coding downstream 38534 8739631 ~ 8768700 (-)
nudt9 nudt9 coding downstream 141580 8660302 ~ 8665654 (-)
si:ch211-11k18.4 LOC101474882,LOC102302894 coding downstream 148015 8651632 ~ 8659219 (-)
tmem86b LOC103374980 coding upstream 50812 8861162 ~ 8862826 (-)
gys1 gys1 coding upstream 56236 8866586 ~ 8881153 (-)
LOC120573900 NA coding upstream 99597 8909947 ~ 8914504 (-)
slc17a7a LOC104930346,LOC103374936,LOC102793338,LOC101484681,LOC100693903 coding upstream 114251 8924601 ~ 8942317 (-)
slc6a16a LOC103374926,LOC104930347,LOC104945282 coding upstream 132709 8943059 ~ 8955286 (-)
G153137 NA non-coding downstream 30968 8700109 ~ 8776266 (-)
G153139 NA non-coding downstream 122481 8659611 ~ 8684753 (-)
G153143 NA non-coding downstream 159943 8647083 ~ 8647291 (-)
G153142 NA non-coding downstream 162209 8644784 ~ 8645025 (-)
G153130 atp2a1 non-coding downstream 191122 8612277 ~ 8616112 (-)
G153274 NA non-coding upstream 250946 9061296 ~ 9111224 (-)
G153275 NA non-coding upstream 254646 9064996 ~ 9085687 (-)
G153455 NA non-coding upstream 386408 9196758 ~ 9203859 (-)
G153456 NA non-coding upstream 389308 9199658 ~ 9501467 (-)
G153462 NA non-coding upstream 409249 9219599 ~ 9219903 (-)
G153172 mrps34,LOC102799846 other downstream 74215 8731397 ~ 8733019 (-)
G152952 NA other downstream 362853 8441179 ~ 8444381 (-)
LOC120574885 LOC103375378,LOC104925605,LOC104966930 other downstream 706836 8082138 ~ 8100398 (-)
grin2aa grin2a,LOC102780805 other downstream 1083320 7569718 ~ 7723914 (-)
arhgdig NA other downstream 2005698 6772880 ~ 6801536 (-)
natd1 natd1 other upstream 1980 8812330 ~ 8816305 (-)
tufm tufm,LOC106606342,LOC101070424,LOC106606341,LOC106931188,LOC103145412 other upstream 40093 8850443 ~ 8857571 (-)
zgc:55558 p-ras,LOC105029053,LOC104950842,LOC104930345,LOC103392975,LOC101069736,LOC106606379,LOC103023536,LOC108413997 other upstream 85432 8895782 ~ 8907662 (-)
LOC120574599 NA other upstream 376900 9187250 ~ 9204006 (-)
LOC120574343 NA other upstream 379034 9189384 ~ 9190066 (-)

Expression


Co-expression Network