trap1 (trap1)


Basic Information

Item Value
gene id trap1
gene name trap1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 13460903 ~ 13470236 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824661.1
CAGTCGCGGGTCCTGCCTGTGCTACGGTCGTACGGCGTGTGCGTCCTttacatactgtctatggtgtgTCCCTTCGGTCAGTCGACCCGTCTTGTCGTGTTATCCCTCGTTTGTTATTATGTCCCGCTGCCTCGCGCTGGCTCGGTTCGCCCTCGGTTCCTCTCAGAGGACCAACTCACGGCTAACGTCATGTGCACGAGGGCTGAGCAGCCGAATTACCTCGCGCTCCTTCACCAGAGACCTGCAGGTTGGGCAGCAGCAGAGGTGGAGCAGTCGGCCCAAAGTGTGGAGCTCCCAGCGGTCCTGTCTCGGCTTCAGCCAGCAGTCTTACTACAGCACCCAGGAGGCAGAGAAAGAGCCTGAAGAGGAGCCTCTGCACACCATCATCAGTGATACGGAGTCTGTTCAAGGTAGCTTGTCCAAACATGAATTTCAGGCTGAGACGAAAAAACTTCTGGACATTGTTGCCAGGTCCTTGTATTCAGAGAAAGAGGTGTTTATCAGAGAGCTGATCTCCAACGGCAGTGACGCTCTGGAAAAACTGCGCCACAAACTGATGACAGCAGGTGGTGAAACGGCTCAGATGGAGATCCACCTGCAGACCGATGGTGCCAAGGGCACCTTCACCATTCAGGACACAGGAGTAGGGATGAACCAAGAGGAGCTGGTGGCCAACCTGGGGACTATCGCCCGCTCCGGTTCCAAGGCATTTTTGGACGCCCTGCAGAACCAGGCAGAGGCCAGCAGCACCATCATTGGTCAGTTTGGTGTGGGATTCTACTCTTCCTTCATGGTGGCTGACCGTGTTGACGTCTACTCGCGGTCCGCTGAGCCCAACGCACCCGGATACAAGTGGTCCTCAGACggCTCTGGAGTTTTTGAGATCGCTGAGGCCAGTGGTGTTCAACAGGGAACAAAGATCGTGCTGCACCTCAAAGACGACTGCAAGGAGTTTTCCGCTGAGGACAGAGTTAAAGATGTTGTAACTAAGTATAGCAACTTTGTCAGCTTCCCCATCTTCCTGAACGGACGGAGGCTCAACACACTGCAGGCTTTGTGGATGATGGAGCCTAAGGAAATTAGTGACTGGCAGCATGAGGAGTTCTACCGTTACGTCGCCCAAGCCTACGACAAGCCTCGCTACACGCTGCACTACCGTGCCGACGCCCCGCTCAACATCCGGAGCATCTTTTATGTCCCTGACACGAAGCCGAGCATGTTTGATGTGAGCAGGGAGATGGGCTCCAGTGTGGCTCTGTTCAGCAGGAAGGTCCTGATCCAGACCAAAGCGACTGACATCTTGCCCAAGTGGCTGCGCTTCCTCCGAGGTGTGGTGGACAGCGAGGACATCCCGCTGAATCTGAGCAGAGAGCTGTTGCAGGAGAGCGCCCTCATCAGGAAGCTCCGTGACGTGTTGCAGCAGAGGGTGATCCGCTTCCTGCTGGACCAGAGCAAGAAGGAGCCAGAGAAGTACAACAAGTTCTTTGAGGACTACGGCCTCTTCATGAGGGAGGGCATCGTCACCACTCAGGAACAAGACGTCAAGGAGGATATTGCAAAGCTGTTGAGGTTTGAGTCTTCTGCTCTGCCAGCGGGCCAGCACACCAATCTGATGGAGTACTCCTCCCGCATGAAGGCTGGCACACGCAACATCTACTACCTGTGCGCCCCCAACCGCCATCTTGCAGAGCACTCCCCCTACTATGAGGCCATGAAACAGAAAGACATGGAGGTGCTGTTCTGCTACGAGCAGTTTGATGAGCTGACCCTGCTCCACCTCAGGGAGTTcgacaaaaagaagatgatCTCAGTGGAGACTGACATCGTGGTAGATCACTACAAAGAGGAGAAGTTTGAAGACAGCAAGCCCGCCTCCGAGCGCCTGACGCAGGAGCAGGCCGATGACCTGATGTCCTGGATGAAGAATGCCTTGGGCCCCCGAGTCACCAACATAAAGCTGACTCCACGCCTGGACACCCACCCAGCTATGATCACAGTGCTGGAAATGGGTGCTGCACGCCACTTCCTCCGCACCCAGCAGCTGGCTCGCACCCCTGAGGAGAGGGCTCAGATACTGCAGCCCACACTGGAGATCAATGCAGgACATGATCTGATCAAGAAGTTGCAGGCACTGAAGGACACAAACTCTGAACTGGCTGGACTGCTACTGGAACAGATCTATGATAACGCCATGATCACGGCGGGCCTGAACGACGATCCCCGACCGATGATTTCCCGCCTTAACGACCTGCTGACTAAAGCTCTGGAGAAGCACTGAGAGCTGTTCAGACATGATCGGTGCAGACGGACTTGGTTTTGAGGACAGTGGACTGAAGCATTTACATAGAACTGCAGGCCTGGAACCATAAAatcacatcccccccccccccggagtACTTGTAAAGGCttttaaagctcagatggagTGACAATTGACTGCTGGAAGCTTTGTAAGCACTTGTATGTCTTCATGCTCTGTGTTCAGCACGGTTTCTTCAGGCTCGTCCACATCTTCAATAATATGGGTGCAAACAATGTAGAGATGAAGTGGGGAAAGCAGGCAAAAGTAAGAAGAGATGCATTAAAATGTTCTAACTGCCAAAAGAAGTTTTATTCTGAAGTGTGCATCAGAGATTTGAAGCGGTAAGAGATGGTTTAATTAGAAATGCAAGATGGTTATCACTGCTGAATAGAgctgttaatgttttttttttataaaccctTGTTCTTTTGCCCTCAAAATCCCTCaaattgttcattttttttcacattatttattttatgttttgcaaTTCATAAGAAGCTGAATACCACAAATGTGGGAATGTTTCAtgtgattaaatattttttaactgGGTCAAATGAAAAGAAACTGGTAGATGGTGTATGAGCTGCAAATATGACTTGTCATCGGTCAGTGGTCAAACATGGATTCTCAACAGGTATCATTAGTACTAATAAAATGGATTTAAAATACTG

Function

symbol description
trap1 Enables ATP hydrolysis activity; identical protein binding activity; and metal ion binding activity. Involved in nucleic acid phosphodiester bond hydrolysis. Predicted to be active in mitochondrial inner membrane. Orthologous to human TRAP1 (TNF receptor associated protein 1).

NR:

description
PREDICTED: heat shock protein 75 kDa, mitochondrial

GO:

id name namespace
GO:0006950 response to stress biological_process
GO:0006457 protein folding biological_process
GO:0005524 ATP binding molecular_function
GO:0051082 unfolded protein binding molecular_function

KEGG:

id description
K09488 TRAP1, HSP75; TNF receptor-associated protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824661.1 True 2979 mRNA 0.51 18 13460903 13470236

Neighbor

gene id symbol gene type direction distance location
pdgfab pdgfa coding downstream 117288 13324235 ~ 13343615 (-)
LOC120574422 NA coding downstream 198259 13226467 ~ 13262644 (-)
LOC120574974 NA coding downstream 247183 13194950 ~ 13213720 (-)
LOC120574973 NA coding downstream 273350 13160825 ~ 13187553 (-)
LOC120574975 NA coding downstream 314974 13120861 ~ 13145929 (-)
crebbpb NA coding upstream 462 13470698 ~ 13531719 (-)
LOC120574398 adcy9 coding upstream 62535 13532771 ~ 13567799 (-)
srl srl coding upstream 102419 13572655 ~ 13586754 (-)
pam16 pam16,LOC106601835,LOC103358706,LOC107695711 coding upstream 161906 13632142 ~ 13636162 (-)
coro7 LOC103358706,LOC106915773 coding upstream 166573 13636809 ~ 13748602 (-)
G154601 NA non-coding downstream 206130 13254473 ~ 13254773 (-)
G154600 NA non-coding downstream 207697 13252924 ~ 13253206 (-)
G154515 NA non-coding downstream 507515 12871558 ~ 12953388 (-)
G154713 NA non-coding upstream 185782 13656018 ~ 13692471 (-)
G154717 NA non-coding upstream 285428 13755664 ~ 13827791 (-)
G154723 NA non-coding upstream 303866 13774102 ~ 13775989 (-)
LOC120575453 NA non-coding upstream 466532 13936768 ~ 13946397 (-)
G154788 NA non-coding upstream 608278 14078514 ~ 14099281 (-)
prkar1b prkar1b,LOC107661853,LOC107653458 other downstream 38952 13335449 ~ 13421951 (-)
sun1 sun1,LOC104947709,LOC102193096,LOC103360714 other downstream 448122 12973260 ~ 13012781 (-)
iqck NA other downstream 488074 12954974 ~ 12972829 (-)
LOC120575506 LOC100697827 other downstream 723420 12735444 ~ 12737483 (-)
cep112 NA other downstream 895432 12427504 ~ 12565471 (-)
tfap4 tfap4 other upstream 119247 13589483 ~ 13631836 (-)
med9 med9 other upstream 580502 14050738 ~ 14057354 (-)
LOC120574967 mafg,LOC104918330,LOC108241257,LOC103373400,LOC101487863,LOC106533856 other upstream 984601 14454837 ~ 14471430 (-)
cenpx cenpx other upstream 1055890 14526126 ~ 14529153 (-)
LOC120574989 LOC108241285,LOC103373333,LOC106518659 other upstream 1063446 14533682 ~ 14543994 (-)

Expression


Co-expression Network