rabep2 (rabep2)


Basic Information

Item Value
gene id rabep2
gene name rabep2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 8627083 ~ 8640435 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824670.1
GGAAGGATGTTGACGTGATTTCCGTAGGCTTAGACCGGGGAAAGTTGTTTCCTGAAGTTGACACTGCGTCGATAATTTTCACAGCAAAGCTCGGGTGCTTGTACAAAATGACTCCGACAGGTTGGTCGGACTTTTGATCGACGTCAGGTGAACTCGGTCTGACGAAAAGATGAGCTCCAAGACTGAAGacacagTGGCGAGCCTGCAGGCCCAGCTAGCCGAGTGCCGAGCTCAGGCCGAACACTGGCAGGGCGTGGCGACGATCTGTGAGCTGAGCAAACAGGAGGAACTGACAGAGCTGCAAAAACAATGTGATCAAGAGATCCAGTCCCTGCAGGAGGCTCTCAGAGAGACCGCAGCGCAGTATGAGGCCAGGATATCGGTCCTTCAGTCTCAGCCTGTGGAGTGGAGACGAGCCAGTGGACACAACATGATCAGTGGAAGGAAAGGCAGGATGGATGCAGAAGTCGCCAGCAGCGAACCCCCAACATCGATGACCAACAGCCTGACCGAGGCCGAAGCCACGGGGTCAACGGACAGGAGGCACAACCAATCAGCAGAGCTCGAGGCGTCGGTGGCGGAGGGAGAAGGGACGCCGCCTACAACAGAAGCGTATTTTTCGCTGCGGCACTGCGACTCGGCCTCGTTGTCCTCCTTCTCCTTAGACACGCCCTCTCTACCCAGAAAACTCCACGCTCAGGAAGACACCGACTCTCTGGTGTCCACAGGAACTTTAGTGCCTGAAGCCATCTACCTGCCACCGGCCGGACACCGGCTGGTCACGCACGGCGACTGGGATGCACTCAATTCTCAGGTGTCAGAGCTGCGAGGGGAGGTGAGTCGGCTGCAGGCTGAGAAGGAGGAGCTGGAGAGAGAACTGGACACACagaccaaccacacacacaaacaggtatcAATGCTCCAGTGTCAGGTCCACACTTCAGAGGCCCTCCTGCAGGATTTGCAGAAATCTTTTAGCCAATCACAGAATGCCGTCCAGAGTCGGCTGGCAGAGTTATCCTTTTCCCAGAGGAAGGTGTGCAGTGAGCTGTCCAGACTGAAAGGAGAGGAGGTTGATGATGAGGGACCAGAGTCCAGCTCTTCATTTCCAGCAACACTGCAGGGGGCGCACTGTGAGGAGCGTCTTCGCATTGAGATTGTCAACCTGAGGGAGCAGCTGGACACCCGGACGGAGGAGAACGAGGTTTTAGAAGTGCAGCTCTCCAGTCTGAAGACAGAGACGGAGAGGATCCAGGCTCAGAAGGACCACTTGCAGGCTGAACTGCTGGCCTGTCGCACCGAACTGGATGCCCTGCGGGTGGCACTGTCTCATGTGCAGAGCACCAACCAGACCCTCAGTAGTGATAAAGCAGCCCTGCATCAAAAGTGTCTGGAGCTGCGTAGCCAAGTGATCAGTCTGCGCTCCCAGGTCGACACCAGCCAGACTGTCCAGAGAGACTTTGTCCAGCTCTCCCAGTCGCTGCAGGTGAAGCTGGAGGTAATACGGCAGGCTGAGAGTCTTGAACAGGTCAGGGAAATCCTGGAGGAGGGAGTCAGCGAAGCTAGTGCCTCGCCTGCAGACGCCTCGTGAGTTTTAGAGAGTCCCATCGGAACCAAAGAGCCCAGGCCAAGATAAAAAGACCTCAACAGTGACCAATAAGGACCAACTAACCATCACCACACCAAATACTGTCGTGACCAGTGGGATTATCACAGCTGGTGCTGCTAGCACTTGTAACTTTTGATGGATATTCCTAAATAGACATCATTTTGGGGTTTGGCTCAGAGGTGATGGTTCGGCGTCAATGACCGAAACAGCTGCTTAGCGACCAAAGTGATTTTTGATGAACCAATAATGCTTTGGGGATActgtaaaaaaaggaaaaaaaaagttcacatTCCCTTTTTCTTACATCTAGTTTATTGCTGTACTAATATACATGTAAATGTGTTGTTAAAACTGACCTGACTCCAGCAAAACACTCAACAGTCCAACAAACACTTAATTTTGCACTGTATCAGTAATTGATATGCAAACTATGcaatcattttttttagatCTTCAACGGATcacagtgcaaaaatgaataaTAGTGATACAAAGTAGAAAATCTCCTAAATTAACTGCATTTGAGATGTGCTTTGTATTACATGTTAATTTAGCTTAGCATTGTTAACTATTCCTGTTCTTACCACAACCATACCAGCTTTTAGACTTCAAGCTAATCAACGACTGTGGATTAGGACAGAAGCTAACAGTCTTTTCTTCAACCTGTTAAGTTCATAatcaaatgctttttttaaGTTTCTCAACCCTGGACCCCAAACTCCATGCAGTCGTTTAATATGTAAAAGGGGTCACAGAAGATTTCTAAGACTGATATGCATAATAatatatttctttaaactatataatttaataaaataggatttattatactgtataattagatcattttacatttatttggaaAAACATGCATGATCTTGAAATTTTAATACCGTCGTTGCAAATTCGACTTTAACCTGAAATATGGAGTCACAGGCCATGGAAGGTCGACACCCCCTAAATAATAAAGGGTTAACTTTATACAGATGATAGAAAATATAGTCTTAAAGTATTAGTATAAAATTATACATTGATATTTATTGTTACTTAAAGCAACAAAATGTAACTTTTAGcgtgagctgtagttccaatgagacaacctgtaggggggcagAAGCGGGagaagttacatagtgttgctttaattgttatatatatatatatatatatatatatatatagtgcaacAAATGTCAGAATTCAAActacattgtttgtttttatgttaaagcggaatgtcagtgtttttcaacctggaccctattttcccacgGATTTCTGTCTTAAGTGACTAATTGTGAACAATGtatgtccactaaaagtgcttgtttttgccactga
>XM_039824671.1
CAGGAAGGATGTTGACGTGATTTCCGTAGGCTTAGACCGGGGAAAGTTGTTTCCTGAAGTTGACACTGCGTCGATAATTTTCACAGCAAAGCTCGGGTGCTTGTACAAAATGACTCCGACAGGTTGGTCGGACTTTTGATCGACGTCAGGTGAACTCGGTCTGACGAAAAGATGAGCTCCAAGACTGAAGacacagTGGCGAGCCTGCAGGCCCAGCTAGCCGAGTGCCGAGCTCAGGCCGAACACTGGCAGGGCGTGGCGACGATCTGTGAGCTGAGCAAACAGGAGGAACTGACAGAGCTGCAAAAACAATGTGATCAAGAGATCCAGTCCCTGCAGGAGGCTCTCAGAGAGACCGCAGCGCAGTATGAGGCCAGGATATCGGTCCTTCAGTCTCAGCCTGTGGAGTGGAGACGAGCCAGTGGACACAACATGATCAGTGGAAGGAAAGGCAGGATGGATGCAGAAGTCGCCAGCAGCGAACCCCCAACATCGATGACCAACAGCCTGACCGAGGCCGAAGCCACGGGGTCAACGGACAGGAGGCACAACCAATCAGCAGAGCTCGAGGCGTCGGTGGCGGAGGGAGAAGGGACGCCGCCTACAACAGAAGCGTATTTTTCGCTGCGGCACTGCGACTCGGCCTCGTTGTCCTCCTTCTCCTTAGACACGCCCTCTCTACCCAGAAAACTCCACGCTCAGGAAGACACCGACTCTCTGGTGTCCACAGGAACTTTAGTGCCTGAAGCCATCTACCTGCCACCGGCCGGACACCGGCTGGTCACGCACGGCGACTGGGATGCACTCAATTCTCAGGTGTCAGAGCTGCGAGGGGAGGTGAGTCGGCTGCAGGCTGAGAAGGAGGAGCTGGAGAGAGAACTGGACACACagaccaaccacacacacaaacaggtatcAATGCTCCAGTGTCAGGTCCACACTTCAGAGGCCCTCCTGCAGGATTTGCAGAAATCTTTTAGCCAATCACAGAATGCCGTCCAGAGTCGGCTGGCAGAGTTATCCTTTTCCCAGAGGAAGGTGTGCAGTGAGCTGTCCAGACTGAAAGGAGAGGAGGTTGATGATGAGGGACCAGAGTCCAGCTCTTCATTTCCAGCAACACTGCAGGGGGCGCACTGTGAGGAGCGTCTTCGCATTGAGATTGTCAACCTGAGGGAGCAGCTGGACACCCGGACGGAGGAGAACGTGCAGCTCTCCAGTCTGAAGACAGAGACGGAGAGGATCCAGGCTCAGAAGGACCACTTGCAGGCTGAACTGCTGGCCTGTCGCACCGAACTGGATGCCCTGCGGGTGGCACTGTCTCATGTGCAGAGCACCAACCAGACCCTCAGTAGTGATAAAGCAGCCCTGCATCAAAAGTGTCTGGAGCTGCGTAGCCAAGTGATCAGTCTGCGCTCCCAGGTCGACACCAGCCAGACTGTCCAGAGAGACTTTGTCCAGCTCTCCCAGTCGCTGCAGGTGAAGCTGGAGGTAATACGGCAGGCTGAGAGTCTTGAACAGGTCAGGGAAATCCTGGAGGAGGGAGTCAGCGAAGCTAGTGCCTCGCCTGCAGACGCCTCGTGAGTTTTAGAGAGTCCCATCGGAACCAAAGAGCCCAGGCCAAGATAAAAAGACCTCAACAGTGACCAATAAGGACCAACTAACCATCACCACACCAAATACTGTCGTGACCAGTGGGATTATCACAGCTGGTGCTGCTAGCACTTGTAACTTTTGATGGATATTCCTAAATAGACATCATTTTGGGGTTTGGCTCAGAGGTGATGGTTCGGCGTCAATGACCGAAACAGCTGCTTAGCGACCAAAGTGATTTTTGATGAACCAATAATGCTTTGGGGATActgtaaaaaaaggaaaaaaaaagttcacatTCCCTTTTTCTTACATCTAGTTTATTGCTGTACTAATATACATGTAAATGTGTTGTTAAAACTGACCTGACTCCAGCAAAACACTCAACAGTCCAACAAACACTTAATTTTGCACTGTATCAGTAATTGATATGCAAACTATGcaatcattttttttagatCTTCAACGGATcacagtgcaaaaatgaataaTAGTGATACAAAGTAGAAAATCTCCTAAATTAACTGCATTTGAGATGTGCTTTGTATTACATGTTAATTTAGCTTAGCATTGTTAACTATTCCTGTTCTTACCACAACCATACCAGCTTTTAGACTTCAAGCTAATCAACGACTGTGGATTAGGACAGAAGCTAACAGTCTTTTCTTCAACCTGTTAAGTTCATAatcaaatgctttttttaaGTTTCTCAACCCTGGACCCCAAACTCCATGCAGTCGTTTAATATGTAAAAGGGGTCACAGAAGATTTCTAAGACTGATATGCATAATAatatatttctttaaactatataatttaataaaataggatttattatactgtataattagatcattttacatttatttggaaAAACATGCATGATCTTGAAATTTTAATACCGTCGTTGCAAATTCGACTTTAACCTGAAATATGGAGTCACAGGCCATGGAAGGTCGACACCCCCTAAATAATAAAGGGTTAACTTTATACAGATGATAGAAAATATAGTCTTAAAGTATTAGTATAAAATTATACATTGATATTTATTGTTACTTAAAGCAACAAAATGTAACTTTTAGcgtgagctgtagttccaatgagacaacctgtaggggggcagAAGCGGGagaagttacatagtgttgctttaattgttatatatatatatatatatatatatatatatagtgcaacAAATGTCAGAATTCAAActacattgtttgtttttatgttaaagcggaatgtcagtgtttttcaacctggaccctattttcccacgGATTTCTGTCTTAAGTGACTAATTGTGAACAATGtatgtccactaaaagtgcttgtttttgccactga

Function

symbol description
rabep2 Predicted to enable GTPase activator activity and growth factor activity. Predicted to act upstream of or within cell projection organization; endocytosis; and protein transport. Predicted to be located in cell projection; early endosome; and microtubule organizing center. Predicted to be active in intracellular membrane-bounded organelle. Orthologous to human RABEP2 (rabaptin, RAB GTPase binding effector protein 2).

NR:

description
rab GTPase-binding effector protein 2

GO: NA

KEGG:

id description
K20130 RABEP2; Rab GTPase-binding effector protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824670.1 True 2950 mRNA 0.46 12 8627083 8640433
XM_039824671.1 False 2940 mRNA 0.46 11 8627083 8640435

Neighbor

gene id symbol gene type direction distance location
LOC120573875 LOC104929518,LOC103375462,LOC108242957 coding downstream 106496 8513629 ~ 8520587 (-)
LOC120575363 LOC103375241,LOC104929519,LOC102212394,LOC101477022,LOC102794201,LOC102305637 coding downstream 115243 8506317 ~ 8511840 (-)
recql5 recql5,LOC102306769 coding downstream 122244 8488379 ~ 8504839 (-)
cdr2l LOC100699057 coding downstream 142391 8474480 ~ 8484692 (-)
nptx1l LOC103375324,LOC104929529,LOC100699861 coding downstream 324812 8297738 ~ 8302271 (-)
si:ch211-11k18.4 LOC101474882,LOC102302894 coding upstream 11197 8651632 ~ 8659219 (-)
nudt9 nudt9 coding upstream 19867 8660302 ~ 8665654 (-)
mapk8ip3 mapk8ip3 coding upstream 99196 8739631 ~ 8768700 (-)
jpt2 hn1l coding upstream 132429 8772864 ~ 8778762 (-)
dhrs7b dhrs7b coding upstream 159040 8799475 ~ 8805852 (-)
G153130 atp2a1 non-coding downstream 10971 8612277 ~ 8616112 (-)
G153127 atp2a1,LOC102238060,LOC106906942,LOC103469116 non-coding downstream 15086 8551296 ~ 8611997 (-)
G153124 NA non-coding downstream 38895 8540378 ~ 8588188 (-)
G153111 arhgdia,LOC100706235,LOC107087451 non-coding downstream 68171 8463179 ~ 8558912 (-)
G153116 NA non-coding downstream 89127 8490056 ~ 8537956 (-)
G153142 NA non-coding upstream 4349 8644784 ~ 8645025 (-)
G153143 NA non-coding upstream 6648 8647083 ~ 8647291 (-)
G153139 NA non-coding upstream 19176 8659611 ~ 8684753 (-)
G153137 NA non-coding upstream 59674 8700109 ~ 8776266 (-)
G153274 NA non-coding upstream 420861 9061296 ~ 9111224 (-)
G152952 NA other downstream 182702 8441179 ~ 8444381 (-)
LOC120574885 LOC103375378,LOC104925605,LOC104966930 other downstream 526685 8082138 ~ 8100398 (-)
grin2aa grin2a,LOC102780805 other downstream 903169 7569718 ~ 7723914 (-)
arhgdig NA other downstream 1825547 6772880 ~ 6801536 (-)
G152567 NA other downstream 1906440 6719784 ~ 6720643 (-)
G153172 mrps34,LOC102799846 other upstream 90962 8731397 ~ 8733019 (-)
natd1 natd1 other upstream 171895 8812330 ~ 8816305 (-)
tufm tufm,LOC106606342,LOC101070424,LOC106606341,LOC106931188,LOC103145412 other upstream 210008 8850443 ~ 8857571 (-)
zgc:55558 p-ras,LOC105029053,LOC104950842,LOC104930345,LOC103392975,LOC101069736,LOC106606379,LOC103023536,LOC108413997 other upstream 255347 8895782 ~ 8907662 (-)
LOC120574599 NA other upstream 546815 9187250 ~ 9204006 (-)

Expression


Co-expression Network