slc6a16a (LOC103374926,LOC104930347,LOC104945282)


Basic Information

Item Value
gene id slc6a16a
gene name LOC103374926,LOC104930347,LOC104945282
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 8943059 ~ 8955286 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824719.1
tttacacaacagctacacacagtaacatccagcagtgtgtattctTGTGTTGTCCAGCCCCGCTGAACGTTTAGGGGAAGGGCTCTATTCAGCCCCCTCGGTCCTCCCATTGGCTCCATCTGCAGTTACTTCTCCTTTATGACTTCTCGGGTTGGCGACGACAGAGTTTTTTCCAGCACAAGAAACGTGGCCGCAAGTTATCAAAACTTGCCTACATGGTCGAGACTTTTCTTCCTTAGCAGACTGTACCCTGAATATTAGCAAAACCTAAGGAAGAAGTTAAGAGTAACCTTGTGAGAGAAGGACAAAAAGTGACGAGCAGAGAAACCAACACCAAGACTTCTGGTCACTCCTCTCTGCTGTCAGCATGACGGAGAAACCTCCACTGGACAGCATCGAGGACGAAGCTTGGCTGGGCGAAGGCCAGTCTCAAACTCAGCTTACGACTGTGTGCGGTCCAGATGGAGTTGAGACATGTGATGCAGACCGACCAGCATGGGACTCTAAGATCCAGTATGTGTTGGCCCAAGTGGGATTCAGTGTGGGCCTCGGGAATGTGTGGAGGTTCCCATACCTTTGCCACCAAAATGGAGGAGGGGCCTTCATGCTGctgtatgtttttcttttactgaTTGTGGGAGTTCCACTTTTCTTTATGGAGTTGGCAGCTGGCCAGAGCATTCGCCAGGGCAGTATCGGTGTATGGAAGCATATCTCCCCAAAGCTAGCAGGGATCGGTTACTCCAGCTGCATGGTCTGTTTTTATGTGGCTCTTTACTACAATGTTATTATTGCTTGGAGCTTGTTCTACATGGGTAATTCTTTCCAGTATCCTCTGCCATGGCAGCGGTGTCCAATTGATGTAACCACCAATGACACAGTGAAAGAATGTGCAGGTTCTTCCCCAACGTCATATTTTTGGTTTCGGAAAGCCCTTGACATCACAAATTCCATCGATGAAACCGGAGAGTTTAACCCCATCATGACGGGCTGTTTATTGGCTGCTTGGGCAATTGTCTCCTTGGCTATGATCAAGGGCATCAAGTCTTCTGCAAAGGTGATGTACTTTTCCTCAGTCTTTCCGTATGTGGTGCTCTTTATTTTCCTCATCAGAGGGTTGATGTTGGACGGTGCGATTGACGGAATCACATATATGTTTTATCCTAAACTGGAAATCTGGGGTAATGTGCAGGTGTGGCGGCAGGCTGCTACACAAGTGTTTTTTGCCCTTGGATTGGGCTATGGCTCCGTTATTGCATATTCCTCCTACAATCCAGTCCATAACAACTGCCACAGGGACGCGCTGATGGTCTCCGGCATCAACTTCATGACATCTGTGCTGGCCTCGCTGGTGGTTTTCGTTGTGCTGGGTTTCCGTGCCAAGAACATCGCTCTACGCTGCGTGGCTGAAAATCTTGGTCTTCTAAGCCTCATGTCATCCCATGGATCTAACCAGCACTTGGTTGGCCCTGGTTGGCCTGGGATCAACATGACAGATCCCAGCTCTGTGTCTATAGCTGAATACAGAGAGTGGTACAGTCACCACAGCTCCATGGTGGGCCCTAACATCACTGACTGCAGTCTGGAGCAGGAGATGAATAAGGGTATTGAAGGGACAGGCCTGGCATTCATAGCCTTCACTGAGGTGATGGCCCTTTTCCCTGCCAGCCCCTTCTGGTCCACATTGTTTTTCCTAATGCTGCTCAACCTGGGCCTCAGCACCATGTTTGGGACCATGCAGGGAATCCTCACACCTCTCATGGACAATTTTAGCCTCTTGGGCCGCCACCGGACTCTACTCACTGTGTCCAGCTGTGCTTTAGGGTTCTTAATAGGACTACTATTCACTCAGCGCTCAGGAAACTATTTTGTGACTATGTTTGACGACTACTCTGCAACTCTACCATTAGTCATTGTAGTAATCTTTGAAACCATTAGCGTGGCGTGGGTTTATGGAACCGATCGCTTCCTAGATGACATTGAAGTCATGCTTAAATGGCGCCCCCCGGTGGTGTACAAATATCTTTGgaagtatgtttgtttgttggcgATGGTTGGTCTTCTGGCTGCAAGTTTGTTGCGCATGGTCTTCAAAAGGCCCACATACACTGCCTGGAATCAAACCACAGCTTCTGAGATGACTCTTGAGTACCCTGGCTGGGCTCTTGCTATGATTGTATTGCTGATAGTCATCGCCAGCTTGCCTGTGCCTATTGGCTACATCCATTTCACGTTGAAAAACCACATGGTCCGTGACACTCGCTCTGAGGAGGGAGGCTGCCAGGAGGTGCACCGTGAGTTGTACACCAAATGCAGCTCCACTGAGCAGCTGGATTCCAACTCCCAGCACAGAGTCCCttctgaggaagaggaggctcaTCCCAGGACTGCCTTCCTGCCGATGGGCAACGAACACTACCGGCTCTTGCCCCAGCAAGAGgtggaagatgatgatgatgatgaacaaGATACTGTGGTGTGAACATGTCTGTGGGAGGATAAAATGTTTAGATTCTAAACCTCAGAGAGTGTATGAGCAAGACCCTGCAAGAGTTATTGCAAAGTGAACGGAGGGCGCTCATAAACAGAATTATTCTTAATCTGAGGAATCGTTGGGTTGCACAAATTATCACATTCAGCAAGTTCTACATTGTTGACAAGCCAAATTTATTTTAACTATTTATATTATTGAAGATACATTACCAGCCAGAAGCTTTTTAGATTCTGTAGTTGTGAAACTACCACTCCTCCATGTAGCTCCCTCCATTCATTTTCTGAACCACTCACACAGTTTGGAAAATAAAACACTCGCAGATACATGGAATAGGAATAAGCTGCTATGTTTagtgaaacaaataaattatgtaaggttttatgaaattGACAAACCACCAGCATGTTAaattagggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcgagtgagagagagagagagtgtgtgagaaagagagagagagtgtgtgagagtgtgagatTATATTTGTATCATTTTACCTCATAAGACCATAgcaatgtttttacattaaagtgctcaGTGTAGCAGTAGTGTATACTGTACTAGATGAGGACCTCAATAAACCTCTAGATGGCAGCAA

Function

NR:

description
sodium-dependent neutral amino acid transporter B(0)AT2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824719.1 True 3208 mRNA 0.47 12 8943059 8955286

Neighbor

gene id symbol gene type direction distance location
slc17a7a LOC104930346,LOC103374936,LOC102793338,LOC101484681,LOC100693903 coding downstream 742 8924601 ~ 8942317 (-)
LOC120573900 NA coding downstream 28555 8909947 ~ 8914504 (-)
gys1 gys1 coding downstream 61906 8866586 ~ 8881153 (-)
tmem86b LOC103374980 coding downstream 80233 8861162 ~ 8862826 (-)
tmem11 tmem11 coding downstream 132709 8807234 ~ 8810350 (-)
nme4 LOC104945280,LOC106931198,LOC106951632,LOC108242919,LOC100703020 coding upstream 14596 8969882 ~ 8973648 (-)
xpo6 xpo6,LOC102794690 coding upstream 18537 8973823 ~ 8998370 (-)
antkmt LOC103374876 coding upstream 43594 8998880 ~ 9003151 (-)
hirip3 NA coding upstream 47979 9003265 ~ 9010931 (-)
kctd13 kctd13,LOC104945278 coding upstream 55937 9011223 ~ 9018740 (-)
G153137 NA non-coding downstream 166793 8700109 ~ 8776266 (-)
G153139 NA non-coding downstream 258306 8659611 ~ 8684753 (-)
G153143 NA non-coding downstream 295768 8647083 ~ 8647291 (-)
G153142 NA non-coding downstream 298034 8644784 ~ 8645025 (-)
G153130 atp2a1 non-coding downstream 326947 8612277 ~ 8616112 (-)
G153274 NA non-coding upstream 106010 9061296 ~ 9111224 (-)
G153275 NA non-coding upstream 109710 9064996 ~ 9085687 (-)
G153455 NA non-coding upstream 241472 9196758 ~ 9203859 (-)
G153456 NA non-coding upstream 244372 9199658 ~ 9501467 (-)
G153462 NA non-coding upstream 264313 9219599 ~ 9219903 (-)
zgc:55558 p-ras,LOC105029053,LOC104950842,LOC104930345,LOC103392975,LOC101069736,LOC106606379,LOC103023536,LOC108413997 other downstream 35397 8895782 ~ 8907662 (-)
tufm tufm,LOC106606342,LOC101070424,LOC106606341,LOC106931188,LOC103145412 other downstream 85488 8850443 ~ 8857571 (-)
natd1 natd1 other downstream 126754 8812330 ~ 8816305 (-)
G153172 mrps34,LOC102799846 other downstream 210040 8731397 ~ 8733019 (-)
G152952 NA other downstream 498678 8441179 ~ 8444381 (-)
LOC120574599 NA other upstream 231964 9187250 ~ 9204006 (-)
LOC120574343 NA other upstream 234098 9189384 ~ 9190066 (-)
LOC120574654 NA other upstream 236700 9191986 ~ 9192402 (-)
LOC120574662 NA other upstream 261783 9217069 ~ 9224455 (-)
LOC120574348 NA other upstream 265255 9220541 ~ 9221090 (-)

Expression


Co-expression Network