LOC120574465 (sstr2,LOC104918336,LOC102291375,LOC103373483)


Basic Information

Item Value
gene id LOC120574465
gene name sstr2,LOC104918336,LOC102291375,LOC103373483
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 14099455 ~ 14106823 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824745.1
ACGAGCGCATCGGAGCTTTGTGCAgagaacgtttgtattttatttacttgtccgaccttttctgtcattttctcgTCGTGTGTGACGCAGACTAGATTATGGGATTATTTAAaggaaaaaatacaatgcaGAGAGGTTTCCTACTTCGATGCCAGTGAGAAAAACTCTAGGAATATTTGGAGATGAAGAAGATGAATCTGCCCTAAACACTGAAATTCTTTCATCCGCACAGAAGTGGCGCATCTTGTAGATAGTAAGATAAAATCCAGTTGCAGGTGAGATGCCATAATCCGACTATCATGGACTCGTGGATCTTCCCATCGTCCCCTCCGAACCTGTCGGAGCACCTCATGTATGACAGCTTCATGCAAAGCAATGAGTCCGACCTCCACGGGAACTACACAGACCACAGCTTCAACAAAACCAGCACGGTGGTCATCACCTGCTTGTACTTTCTGGTTTGCACTGTGGGGCTCTGCGGAAACTCCCTCGTCATCTACGTCATCCTGCGCTACGCCAAGATGAAGACAGTCACCAACATCTACATCCTCAACCTGGCAGTGGCCGACGTGCTCTTCATGCTGGGCCTGCCGTTCATTGCTATCCAGCTGGCGCTGGTCCACTGGCCGTTCGGCCCTGTGCTCTGCAGGGTGGTGATGACCGTCGACTCTCTAAACCAGTTCACATCTATCTTCTGCCTGATGGTCATGAGCATCGACCGCTACCTGGCTGTGGTGCATCCCATTAAATCCACAAAGTGGCGCAAGCCGCGCATGGCGAAGACTATTAACTTAGCAGTGTGGGGGGTGTCACTGATGGTTAATCTGCCCATCGTTATCTACAGCGGAGTAAGCACAAAGCACAACGGCTGCTTCTGCACCATCGTGTGGCCTGAGCCACAAGAGGCCTACTACACAGTGTTCATGTTCTACACCTTCATCCTGGGCTTCTTCCTGCCCCTTTTGGTCATCTGCCTTTGCTACTTGTTCATCATCTTTAAGGTGAAGTCCTCAGGCATCCGTGTGGGCTCCTCCAAGAGGAAGCGCTCAGAGAGAAGGGTGACTCGGATGGTGTCCATCGTGGTGGCAGTGTTCGTCTTCTGCTGGCTGCCTTTCTACGTCTTCAACGTCACCTCGGTGACAGGAACCATCAGCACCACTCCCATCCTGAGGAGCACCTTTGCTTTTGTGGTGGTTTTGGGATACGCCAACAGCTGCGCCAACCCCATCCTCTACGCCTTTCTGTCGGAGAACTTCAAGAAGAGTTTCCAGAATGTTCTGTGTCTTAAGAAGGTGGGTGGGCTGGATGAGGCTGATCGCAGCGACAGCCGGCAGGATAAGTCTCGCATGATAAATGACCCCACAGAGACCCAAAGTACTCTGCTGAATGGGGACCTGCAGACCAGCATCTGAGAGGAAGGTGATTGGACTTGcataaacacactcacacagactcaTACGTATGTGAAACCAGAAATGGGGACTCAAGTTTGAGACTCTGACCCGTGGCGCACTTAAGTGgcacacacagtgacttcagacttgacttgagactcatcttcaaaagacttcagactcggCTAGGACTCGAGATGCAGGATTCGTGAACAATCTTTATTTTAAGGAAACATCTGATGAGCTGAATGTCATTCCCCTCCCTGCGTAACATCCTATGTAATATGTAACGTATCTGCTGCGCGCGGCCACACATGAGAGGACAACAACAAACGTGGCGACTGCACTGGCAGCTGCTGTGCCATTCATCAGAAGCTTTGGTTTAAATCTTCAGACAACAAGGCCCAAACAAAAGAATCACTGAATACTAAATATTTGGTATCAAGATAAATCATTCTGGCTCAACCACATCTCATTTTATCAGGCACTTGAACACACACCCTGATAGCTTAGCAAACACGTTTAGCTCAGCATTGGCTATCTAACGGCTTCTTGCTTTAGCTATGACCTACGGAGATTAACTCTATCTATCCGTCGTTCACTAGATGGTATGAAAAGATGAATTagcgtttgtttgtttatttgccaAACTTTTTGTGGGGATTTAACATTACATAATCATTTACATCCTGCTGGCTGCCACCCTTTTAATTATTTACGGTTGATCATGTAACGTTACAGTTGTATTTAGTTAACTTTACACTGGGTTTGAGACTCTGGGGGATGTGTCCAGCCTCTCAAACCTGGACACATAGGCTGTCATTTGTAGACTGCTCTGTAAGTGAAAAATAGGTTAGTTATTCATTTTAGCAATATTTTCCTGATAACCTGAGTACCTCAATATTTggtctgtactgtactgtatgttcatgtTACAAGGGAAAATACAGTTATTAACTTGAAAGTAAAGCAttcctgttttttgttgttgtcatatTGCTATTGCCTTTTTACACTGATTATATAACAAACAACTAATCAAACTGATACTGCATGATAATAGATACATGAGTCATAATAACATTTTACATGGTTTGAATTCCTTATAGCCTATTTAGCTATGCAGTGTTCTGAGCAGCCTGGATGGAATGCAGCAGGTGATACAACACTCATTATAACCAcgagagacttgagacttgacttggactcgagttaaaagacttgagacttgacttggactcgagttaaaagacttgagacttgacttggactcagagacttgtgagcatctctgTCTGAAACAAATAACAGCTCTTATCAACATTTTTAAGATCACATCGAATAGGAAGAAGACATGATTAAATAATAAACATGTCACAGAGGAACATGTCTGTTGTTAAGGAGGACAAAAAACCATCAGAAGGTCCTACTGAACTGTTCCTCTATCTGCCTTTGACACATTGTCTTGGAAACAAATCCATTATAACATAATCAGTCCATACAACTGTATGCTCTATGCTTTGAATGAAAATGGAATCAGTTTGTTTGCTCTCAGTGTATTGAGGTAGAAGGAACACTAACGCCCATTTGTAAATGGTCCTCTGGAGACCCGGGGTTATATACATAGTTTACAGCAGAGGGCCTGTGCCTGCATTGTGTAAAAATAACTACATACCAGTGTGTTCCTATGCTGTAATACAAAATACTGTTGTTAAAACATGATAATTCCTCTATTTTGTTCCTGTCTTGTCTGcaagttattttttctttttgactgTAAATAACTGTACAGGAAATGGGCAAAGAGACTATATGAAACGTCAGAGGATTTTATATTCAGTGTCATTTAGTTTTGAAACTCTAAATCTAACTTGTGAATAACGAATGAATGTCAGTGCCATTGATTCTTGTGTTTTGTAGTACAATGGTCACATGATTTAATGTGTGAccaattttacttgtgaagaaaTGTAtcaaatgtaaatgtgaatAACAGTGTTCAGTTGGCAGGCAAATATTTCGTCCTGTGTCGCTCGCTGTGTCAATATAGCTACATGCATAATTGATATTACATTAATGGTACTGGCTCGATATACCAAGCCAGCCTCTAACCAAAGTGCTGCTAAGATGTATAGAAACTCTATTACGATGTTGTATAGTATTATATCAAGTAATGTCATTGTATGCCTGTTGCTACTGGCCTTCTGTTGGAAACTGTTCTTTATCATGGCTTATTTACCATTATTTATGTGTATCATGTAATAATGCTGCTGCCATTGTTTGCAGCTATTACAGTAATGgcatttatcaaaaatgtcagACTGCATGATTCTAAATTATTCAGTATGAATGCCTAGTCGTGGCTCAGCTTTGACTTTTTGTCATCTGAGAGCATAAAATCTGTTTAGATTGTATTTTGTAAAGGAATATTTTAATACCAAGAAACAGATGGGTAACTATCTTGGAAGTAGTAAACTGGGATTTAAGATGGATTTAAAcatatttcatttaaaacacgtACCGTTTAttgttgtttcactgttttgtaTTACAGAAAACGTTGTTTGATGATGTGCTATTGGTAATTCCTCTGTTTCTCTATATTACTTTGCAGATATGAGGGGCTTAGTTTATCCCGTGCTGCCCCCCATTGCAAACTATTTGTAAATACTTTGTATAATGAAACTGGACCATCTTCGATTtctgtctccatgtgtctcaGTGACGTGAATTTGTGAAGGGCTAGAACACTTATCCTCAAGAGGCTTTGGTGTTCCTTTATAATAATCATCATTGTGCTCCACAGTTCATCCTGCCATCCTGTGACTCGCTGTTTGTTGCTGTAATCAGATAACTATCTATATAAATTGTTAAACCTTTACCCTACCCAGCGACAGATTATGATTAATGTGCAAAGAATGTGTGTTGCATTGATCTCAACATACAAGCCAGCCATTCTATAGCAAAAATGTGTATTATAtagtattatactgtatatacaaataACACATACAAACCACTGAGCATTCTTCAGTTttccatgacacacacacacacacacacacacacacacacaatttgtgAACCACCAGCCATGACTAATAAAATTCCATATCCAATCTCCCTCTCTGCAGTATTGCGAAACTTGTTACCTGGTCTGTAACATCTTATTACCATTGAAAGACATGACACACCTCTAGTGTCTTATATTTCCATAGCAACAGTGACTAAGAGTGTTGGTCCCATGGTTACACAAATTAGCATAATAATAGAGAGATGAATCCGGACATGAATTATCAATGTAGACATTGCTAAGAtgactgaagaaaaaaatagaaggCTGCATTAAGGCTGCAAAACCAAACACCTCAGTTACATTAAACCTGATGAAAGTGTATAGTTTGTGTGCACCACAAAATGTAAAACCAAACATCTTGTGTTGTCAAAATCATCCAGCTGTTGTAGTTATAATTATGATTCCggcaaagatttttttttttttttaaatacctgcATTTCTTAAGTCTATATTGCAGATTTTCCACTTAGTATTTGCTCCATCGGTGTttattatttagatttttatgaGGAGCCTTATTTGAATTGCTCAAATGCTGTATCTCATAAGCTTTGGGAAATCTTACAATTGCTCAAAAGTTTAGCAGTTTCTGTAGAAAGTTGGCATTATGGATGTTTTTCCTGTTTCTGCTTTGTTCAATTATAATGAAACAGCAAGTTTAATGGAGCAAACATGGATTGTGTAAAGCTATGTCGAAACTCAATAAAGTAATAAGTGACA

Function

symbol description
sstr2 Enables PDZ domain binding activity. Predicted to be involved in cellular response to estradiol stimulus; cellular response to glucocorticoid stimulus; and neuropeptide signaling pathway. Predicted to act upstream of or within adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway. Located in cytosol.

NR:

description
PREDICTED: somatostatin receptor type 2

GO: NA

KEGG:

id description
K04218 SSTR2; somatostatin receptor 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824745.1 True 5193 mRNA 0.41 2 14099455 14106823

Neighbor

gene id symbol gene type direction distance location
LOC120575451 rab26,LOC102798624,LOC101484267,LOC100707100 coding downstream 148699 13884337 ~ 13950756 (-)
LOC120575446 LOC104960164 coding downstream 235921 13860150 ~ 13863534 (-)
hmox2b LOC103358700,LOC108247647,LOC100705244,LOC101479559 coding downstream 334919 13757750 ~ 13764536 (-)
coro7 LOC103358706,LOC106915773 coding downstream 350853 13636809 ~ 13748602 (-)
pam16 pam16,LOC106601835,LOC103358706,LOC107695711 coding downstream 463293 13632142 ~ 13636162 (-)
LOC120575134 NA coding upstream 178351 14285174 ~ 14288819 (-)
rnf213a rnf213 coding upstream 277279 14384102 ~ 14417141 (-)
LOC120575368 NA coding upstream 312539 14419362 ~ 14427318 (-)
LOC120575370 LOC104945235 coding upstream 323198 14430021 ~ 14439111 (-)
LOC120575491 pcyt2,LOC103373415,LOC101487187 coding upstream 334980 14441803 ~ 14451655 (-)
G154788 NA non-coding downstream 174 14078514 ~ 14099281 (-)
G154791 LOC100698953,LOC106518679,LOC103373486 non-coding downstream 11689 14085742 ~ 14087766 (-)
LOC120575453 NA non-coding downstream 153058 13936768 ~ 13946397 (-)
G154717 NA non-coding downstream 271664 13755664 ~ 13827791 (-)
G154723 NA non-coding downstream 323466 13774102 ~ 13775989 (-)
G154825 NA non-coding upstream 219150 14325973 ~ 14326936 (-)
LOC120575037 NA non-coding upstream 224122 14330945 ~ 14337074 (-)
G154948 LOC104962285,LOC104925065 non-coding upstream 520927 14627750 ~ 14664671 (-)
G154952 cyth1,LOC103140955,LOC102194078 non-coding upstream 526355 14633178 ~ 14636802 (-)
G154953 cyth1,LOC103392816,LOC101076412 non-coding upstream 533279 14640102 ~ 14647069 (-)
med9 med9 other downstream 42101 14050738 ~ 14057354 (-)
tfap4 tfap4 other downstream 467619 13589483 ~ 13631836 (-)
prkar1b prkar1b,LOC107661853,LOC107653458 other downstream 677504 13335449 ~ 13421951 (-)
sun1 sun1,LOC104947709,LOC102193096,LOC103360714 other downstream 1086674 12973260 ~ 13012781 (-)
iqck NA other downstream 1126626 12954974 ~ 12972829 (-)
LOC120574967 mafg,LOC104918330,LOC108241257,LOC103373400,LOC101487863,LOC106533856 other upstream 348014 14454837 ~ 14471430 (-)
cenpx cenpx other upstream 419303 14526126 ~ 14529153 (-)
LOC120574989 LOC108241285,LOC103373333,LOC106518659 other upstream 426859 14533682 ~ 14543994 (-)
LOC120574213 NA other upstream 658911 14765734 ~ 14790778 (-)
LOC120574214 bahcc1,LOC106528540,LOC108241329,LOC107083174 other upstream 688823 14795646 ~ 14828239 (-)

Expression


Co-expression Network