c15h17orf75 (clg4h17orf75,clg8h17orf75,LOC102789701,LOC101467397,LOC102229770,LOC106934014,LOC106960136)


Basic Information

Item Value
gene id c15h17orf75
gene name clg4h17orf75,clg8h17orf75,LOC102789701,LOC101467397,LOC102229770,LOC106934014,LOC106960136
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 11057892 ~ 11063850 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824811.1
TGGTCGGACACAGAGGACCGCGCATGCGTACAAGGCACATAAACGACGACTGGATACCTTTGACACTACTGCTGCAGTTACATATGCGATGTTACAATCGTAATATCAACCGGAGATCCCAGCGTCAATAACACCCGTCTACTAACATAGCACAGCTAAACAATATAAATACGTCAttgttttctgtcattttagccGGCTGCTAGCTTGCTCCGTGCAGCAGTAGGATCATGTTTACCTCCCAAACCTCGTCCTTCCAGGAGTCAATTGACGTGGAAGAGAGAGATGACTTTGACAGCGAGGAAATTGCTGGATACAGCCAGAAAATTCAGCTGAACTGCTACTACACCATCTATCTTTATCAAGGCACAAGATCTGAGGCTTCTGGGGCAAATGTGGCGTGGAACCAGAGACGAACAGACTCCACAACAAGTCAGGATGACTTTAGCCTGACACTGATTGACAGCAGCCTGCCATCAGAGGCGGAACCTGAGCTGCGGACCTACATTTCAAGGAGGCTGAGCAAAGGTGCCCTGCTGGGAGGCATGGGCAACATCGCTACTGTGGAACTAAGTATTCCAGAGCAGGCAGTCGGCTGCTACTGCTGTCTCCTGGAGCAGGAAAGGTCTCCTGAACAGCCTGATGCTGATGGAAACGGATACGTCATCTGCTTTATGGGCGGCTCTGAAAAAGGACTGAACTTATTTAGATTAGAGCTTGATAAATATGTCCAAGGCCTACATAGCAGTCTGCAAACGCCAGAGCTGCAGAACCTTGAGACAGAGGTGCGTCCCTATCTGAGTCAGTGGTACGAGGAGTCTGTGATGCACATTTATCGGGTGGTGCAGCTGGTCCAAAGCAACATCAGCTTTTTGCTGCATGCTGCTCTGAATCACACACATGTGGAAGTCAATAATTCAGATGAGAGGACAAAGGCTGATGTGTCCAGGTTCATCAAAGCAGCCAGTTTGCAGGGTCTCTCCCAACAAGACACCACAACAGCTTCTCTGTGTAAGGCTATCTCAGAGGACACACACTCTGACCTGATCATAGACTGCTCCACCAGCCCACCCACACTCTCGAACACTGTCAGTAATCGTTTCTGTGACAGCTGGATTCAGGCATTTCTAAATGCTGCAGAGCGTTGTAATCCTTTCCTGCTCAGACAGATTCTGGAGAACTTCAAACTTAAGGCCATCCAGGACATGAACAGCCTGAAGCGTTTCGTGCGACAAGCAGAGATGAGTCACTACGCCCTTTTTCGCTGCTGCCAGTTTCTACAGGGCTGCGGAAATGGGGATGTGTTGCTGCAGAATGCCAGGGCGGAGCACAGCGACCTGCCCGAAGCCTGCAGCATCATCAGTGTCCTGGAGGAGTTCCTCAAAGAACAATCCCAGGCCTGATTCCATTACACCTAACTCCAAGTTGTGGGGCCTGGGTACCTTGTCTGTTGCTGGTAAGACAGTCTGCTCTTCCAGCCACAAAGCAGATAACCCATACAATTCTAAACCTAGCACTACATTCTATGTTTAACATTAGTTCCTCAAATAAAaatttagcagtgggggcattttgaatctgtcagctgttgGCAGATTCAGAATTTAAATCTAAGTTATAGGTTCCCTGTGCTGGCACTACTGCTTCTAAGATAGAGTGGTGGTCAGATCTGGAATATGTACTGTAAAACACTGACAACTGACACTCAGCTTCCATCAGACCATTTCTATAGGCAGAAAAAAGTAGATGTATAGCAACCAAGTCGCtttatcagttttatttatacctTTGACGTTTTTTACAATACTTTGAACCAAATATTATTGCTAGTGTTTTTGCTAACTGACAATGATCACAAAACAGAATTGATCCAAACTAAAGCTTCTACTCATTGGAGTgggattgttttttgtttttacttatttaatatccaaatataattttgtgTGATTGTACTAGTTTTCTTTTGAGAAGAAACCCATTGAGGATGCACAAATCACAATTATGCATTGCTTGTTACCTAGGCCTTGTGTGTGCTAAAAATTCCAACCCAATACCTGCACTACAATATTATTTTTGTCTAATGAATACCGCTACTGTATGTACGCATGTCTGTCAAGTGATATTAGATGTAAGTTTAATCCTTCTTTATTAATACAGTGTTGTAGATAGTGTAGTTTTTGGATATCATTTTCTATTTACAAAATCCAAATAGCATTCACCAGCTAAATACATCATGAGAACAAAACAGTCACTATGTGACCAGTCACTCACTACATTTACTAAGCATTTGTTTGGTTTCAAAGGTTGTGCATAAATAATACCCACagaaaaaagtagaaaataaacatgttgaaaaaagtagaTGATGTATAACAGTACTCACAGTAAATGTTAGCATGCCTAagttttattttcctttcattGTGTAACTGCAACAAGTTTTTGTATTCCATTGAACCCATAAAGGGTTTTAGAAAATCAAACCATTTCCATTCAAACCGGTCCAAAGTGTGTTATACAGCAATATGGTTGGTGGTATACTATACTTTTAAACTGTGAAGCAAgtaaatgatacattttttttttaaccacagtGTGACTGGCCCACAGTGCGTATATGTTGACATTTGTGTACAGCGTGTTCTCTGTAGTTATAAATGACTACGTTGTTCTTGGTCTTGAAGtaaatactaaaataaataCCACATTTGAACCTA
>XM_039824812.1
TGGTCGGACACAGAGGACCGCGCATGCGTACAAGGCACATAAACGACGACTGGATACCTTTGACACTACTGCTGCAGTTACATATGCGATGTTACAATCGTAATATCAACCGGAGATCCCAGCGTCAATAACACCCGTCTACTAACATAGCACAGCTAAACAATATAAATACGTCAttgttttctgtcattttagccGGCTGCTAGCTTGCTCCGTGCAGCAGTAGGATCATGTTTACCTCCCAAACCTCGTCCTTCCAGGAGTCAATTGACGTGGAAGAGAGAGATGACTTTGACAGCGAGGAAATTGCTGGATACAGCCAGAAAATTCAGCTGAACTGCTACTACACCATCTATCTTTATCAAGGCACAAGCCTGACACTGATTGACAGCAGCCTGCCATCAGAGGCGGAACCTGAGCTGCGGACCTACATTTCAAGGAGGCTGAGCAAAGGTGCCCTGCTGGGAGGCATGGGCAACATCGCTACTGTGGAACTAAGTATTCCAGAGCAGGCAGTCGGCTGCTACTGCTGTCTCCTGGAGCAGGAAAGGTCTCCTGAACAGCCTGATGCTGATGGAAACGGATACGTCATCTGCTTTATGGGCGGCTCTGAAAAAGGACTGAACTTATTTAGATTAGAGCTTGATAAATATGTCCAAGGCCTACATAGCAGTCTGCAAACGCCAGAGCTGCAGAACCTTGAGACAGAGGTGCGTCCCTATCTGAGTCAGTGGTACGAGGAGTCTGTGATGCACATTTATCGGGTGGTGCAGCTGGTCCAAAGCAACATCAGCTTTTTGCTGCATGCTGCTCTGAATCACACACATGTGGAAGTCAATAATTCAGATGAGAGGACAAAGGCTGATGTGTCCAGGTTCATCAAAGCAGCCAGTTTGCAGGGTCTCTCCCAACAAGACACCACAACAGCTTCTCTGTGTAAGGCTATCTCAGAGGACACACACTCTGACCTGATCATAGACTGCTCCACCAGCCCACCCACACTCTCGAACACTGTCAGTAATCGTTTCTGTGACAGCTGGATTCAGGCATTTCTAAATGCTGCAGAGCGTTGTAATCCTTTCCTGCTCAGACAGATTCTGGAGAACTTCAAACTTAAGGCCATCCAGGACATGAACAGCCTGAAGCGTTTCGTGCGACAAGCAGAGATGAGTCACTACGCCCTTTTTCGCTGCTGCCAGTTTCTACAGGGCTGCGGAAATGGGGATGTGTTGCTGCAGAATGCCAGGGCGGAGCACAGCGACCTGCCCGAAGCCTGCAGCATCATCAGTGTCCTGGAGGAGTTCCTCAAAGAACAATCCCAGGCCTGATTCCATTACACCTAACTCCAAGTTGTGGGGCCTGGGTACCTTGTCTGTTGCTGGTAAGACAGTCTGCTCTTCCAGCCACAAAGCAGATAACCCATACAATTCTAAACCTAGCACTACATTCTATGTTTAACATTAGTTCCTCAAATAAAaatttagcagtgggggcattttgaatctgtcagctgttgGCAGATTCAGAATTTAAATCTAAGTTATAGGTTCCCTGTGCTGGCACTACTGCTTCTAAGATAGAGTGGTGGTCAGATCTGGAATATGTACTGTAAAACACTGACAACTGACACTCAGCTTCCATCAGACCATTTCTATAGGCAGAAAAAAGTAGATGTATAGCAACCAAGTCGCtttatcagttttatttatacctTTGACGTTTTTTACAATACTTTGAACCAAATATTATTGCTAGTGTTTTTGCTAACTGACAATGATCACAAAACAGAATTGATCCAAACTAAAGCTTCTACTCATTGGAGTgggattgttttttgtttttacttatttaatatccaaatataattttgtgTGATTGTACTAGTTTTCTTTTGAGAAGAAACCCATTGAGGATGCACAAATCACAATTATGCATTGCTTGTTACCTAGGCCTTGTGTGTGCTAAAAATTCCAACCCAATACCTGCACTACAATATTATTTTTGTCTAATGAATACCGCTACTGTATGTACGCATGTCTGTCAAGTGATATTAGATGTAAGTTTAATCCTTCTTTATTAATACAGTGTTGTAGATAGTGTAGTTTTTGGATATCATTTTCTATTTACAAAATCCAAATAGCATTCACCAGCTAAATACATCATGAGAACAAAACAGTCACTATGTGACCAGTCACTCACTACATTTACTAAGCATTTGTTTGGTTTCAAAGGTTGTGCATAAATAATACCCACagaaaaaagtagaaaataaacatgttgaaaaaagtagaTGATGTATAACAGTACTCACAGTAAATGTTAGCATGCCTAagttttattttcctttcattGTGTAACTGCAACAAGTTTTTGTATTCCATTGAACCCATAAAGGGTTTTAGAAAATCAAACCATTTCCATTCAAACCGGTCCAAAGTGTGTTATACAGCAATATGGTTGGTGGTATACTATACTTTTAAACTGTGAAGCAAgtaaatgatacattttttttttaaccacagtGTGACTGGCCCACAGTGCGTATATGTTGACATTTGTGTACAGCGTGTTCTCTGTAGTTATAAATGACTACGTTGTTCTTGGTCTTGAAGtaaatactaaaataaataCCACATTTGAACCTA

Function

NR:

description
PREDICTED: protein Njmu-R1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824811.1 True 2720 mRNA 0.42 10 11057892 11063850
XM_039824812.1 False 2645 mRNA 0.42 9 11057892 11063850

Neighbor

gene id symbol gene type direction distance location
LOC120574053 LOC104934592,LOC103360693 coding downstream 41301 11008642 ~ 11016591 (-)
rln3a LOC104944611,LOC103360695 coding downstream 63862 10988167 ~ 10994030 (-)
il12rb2l NA coding downstream 70732 10975641 ~ 10987160 (-)
LOC120575016 tnpo2,LOC103360699 coding downstream 88136 10954170 ~ 10969756 (-)
LOC120575512 NA coding downstream 89718 10968106 ~ 10968174 (-)
LOC120574485 NA coding upstream 17869 11081719 ~ 11084573 (-)
LOC120574065 NA coding upstream 108671 11172521 ~ 11263721 (-)
LOC120573949 NA coding upstream 226016 11289866 ~ 11293711 (-)
LOC120573873 hn1 coding upstream 235357 11299207 ~ 11309655 (-)
LOC120573874 sumo2 coding upstream 246828 11310678 ~ 11318550 (-)
G153943 LOC104934589,LOC102791985 non-coding downstream 22376 11033206 ~ 11035516 (-)
G153950 NA non-coding downstream 98371 10950571 ~ 10959521 (-)
G153937 NA non-coding downstream 150284 10905355 ~ 10907608 (-)
G153734 NA non-coding downstream 462885 10594743 ~ 10595007 (-)
G153671 NA non-coding downstream 763726 10286635 ~ 10294166 (-)
G153987 NA non-coding upstream 5193 11069043 ~ 11073776 (-)
G154036 NA non-coding upstream 207969 11271819 ~ 11272848 (-)
G154088 NA non-coding upstream 288353 11352203 ~ 11352565 (-)
G154115 NA non-coding upstream 403058 11466908 ~ 11467112 (-)
G154163 bri3,LOC104946088,LOC103141671 non-coding upstream 465846 11529696 ~ 11557733 (-)
LOC120574455 NA other downstream 266327 10784112 ~ 10791565 (-)
gtpbp1 gtpbp1,LOC104924447,LOC102799794 other downstream 667716 10352158 ~ 10390176 (-)
LOC120574648 NA other downstream 1234899 9822145 ~ 9822993 (-)
LOC120574583 NA other downstream 1321058 9735626 ~ 9736834 (-)
LOC120574609 NA other downstream 1324697 9732686 ~ 9733195 (-)
LOC120574486 NA other upstream 14695 11078545 ~ 11080607 (-)
tnrc6c1 LOC103361861 other upstream 34466 11098316 ~ 11137528 (-)
G154033 NA other upstream 139600 11203450 ~ 11225546 (-)
LOC120574419 NA other upstream 1022135 12085985 ~ 12090981 (-)
cep112 NA other upstream 1363654 12427504 ~ 12565471 (-)

Expression


Co-expression Network