LOC120574485


Basic Information

Item Value
gene id LOC120574485
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 11081719 ~ 11084573 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824816.1
TAAAATGCTCTTCTGCTCAGACTGATGTGCTTTCTAGTGGGTCAGACAGGAGGAGCGCTTACATTCTGCACTAATTTGCTGTTTTCAGTGGCATTTATGGAGGCCTTGTATTTTTGGGTTAGTCTCCTAGTTGGACTCTGTGTTGGGTCATCTTTTGCTTTAGCACCCAAACCGAGAGATCCTTTACTTCAAACACCTCAGATCACAGGGAGCTCCAAACACACTGAGCAACAAAAGTCTCCACTTGAAGAACGACAGCAGGTGAATACTGTGAGAGTGACCTGCCATCCAGACTCGTTGGAGATTGTTATCAAAGCTGACCTGTTTGGTATTGGAGCTCCTGTTAATGTGGATGAGTTGCGCCTTGGAGTGAAGTACAATGATTACTGCCGAGCTACAGCGTCTTCATTAGATGAATACAGAATCCGTGTTGGACTTGTGGACTGTGGCACCAAGCACTGgATGACCGATGACTCTCTGGTCTTCACAAACCTCCTCATATACTCTCCTGTGGCCTCTTCAGCGGGGGTGGTTCGAATGGATGAGGCTGTAATTCCAATTGAGTGTCATTATGAAAGgaagtaCAGTTTGTCCAGTTCTTCACTTACACCTGTCTGGATCCCCTTCACGTCTACCCTATCTGCAGTGGAAACTTTGCAGTTTGACCTGAGAATTATGACAAATGACTGGCTATATGAAAGAAGTTCTAACGTGTTTTACCTCGGTGAGCCCATTGGCATTGAAGCCTCAGTCAGAGTGGGACATCACGTGGGGCTCCGAGTGTTTCTGAGCAGCTGTGTGGCCACACTTTCCCCAGACATATACTCCGTTCCCAGATACGTCTTCATTGAAAATGGGTGCTTGGTTGACTCCCAGCTTCCAGGTTCAAGGTCCCAGTTCTTAACCAGGACACAGGACAACAAGCTCCAATTGGTTGTTGATGCCTTTAGGTTTCATAatgaggacagaggagagCTCTACATCACCTGTCACATTAATGCTGTACCAGTATTTGATGCAGAGGCACTAAATAAGGCGTGCACTTTTGTAAATGGAAGATGGAGGTCAGCTGATGGTAATAACTACTTATGTGGGTATTGTCAAAGCCAAAACGAAGTTGGCCAAACCCCCAGTAAGCCCAGCAGCCCAGCCAAGTTTGGTCCTCGTGGGTTTGGGACTGTGGATGAAACTGAACCCTTATGGAGGAGTGCAATGAAGACCAATACAGtgtgggaacaggaggCGAGAGTTGGTCCGATGATGGTCTTGCCAACCAGGCAAATAAGTGGACCTATACCTGTGGAAGAGGTTCCTTCAGTTCTTAATAAAATCAGCAGACTTGCACTGTACGGCAGTCAGTGGAGAAGTGGAACAAATGACAGAGTTGATCAGAAGGGACTGCTTCCTGGTTCACAATCTACACCAGACCAGGTGGTGGTGGTTAAGACTCTTAGTTCTGAGCAGAATGAAGATCtaaaagATGGAGATGCTGAGAAAGCTTTTGCTCCTCTAGAAAAAGCATCCCCCGAGGTCCACCTGAAATCAAAGGAAGCAGCGCTGGACAATAACACAACAGCCCTCGATGATGTCAGCCCAACTGCTCAGTTTTCTCTGGCTACCACCGACCTGTTGAATGCAACTGCAGCAGAATCTACCATTACAGACCCAAAAAGAtaataaacaatttaaaaacaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824816.1 True 1695 mRNA 0.46 10 11081719 11084573

Neighbor

gene id symbol gene type direction distance location
c15h17orf75 clg4h17orf75,clg8h17orf75,LOC102789701,LOC101467397,LOC102229770,LOC106934014,LOC106960136 coding downstream 17869 11057892 ~ 11063850 (-)
LOC120574053 LOC104934592,LOC103360693 coding downstream 65128 11008642 ~ 11016591 (-)
rln3a LOC104944611,LOC103360695 coding downstream 87689 10988167 ~ 10994030 (-)
il12rb2l NA coding downstream 94559 10975641 ~ 10987160 (-)
LOC120575016 tnpo2,LOC103360699 coding downstream 111963 10954170 ~ 10969756 (-)
LOC120574065 NA coding upstream 87948 11172521 ~ 11263721 (-)
LOC120573949 NA coding upstream 205293 11289866 ~ 11293711 (-)
LOC120573873 hn1 coding upstream 214634 11299207 ~ 11309655 (-)
LOC120573874 sumo2 coding upstream 226105 11310678 ~ 11318550 (-)
gga3b gga3 coding upstream 243696 11328269 ~ 11338111 (-)
G153987 NA non-coding downstream 7943 11069043 ~ 11073776 (-)
G153943 LOC104934589,LOC102791985 non-coding downstream 46203 11033206 ~ 11035516 (-)
G153950 NA non-coding downstream 122198 10950571 ~ 10959521 (-)
G153937 NA non-coding downstream 174111 10905355 ~ 10907608 (-)
G153734 NA non-coding downstream 486712 10594743 ~ 10595007 (-)
G154036 NA non-coding upstream 187246 11271819 ~ 11272848 (-)
G154088 NA non-coding upstream 267630 11352203 ~ 11352565 (-)
G154115 NA non-coding upstream 382335 11466908 ~ 11467112 (-)
G154163 bri3,LOC104946088,LOC103141671 non-coding upstream 445123 11529696 ~ 11557733 (-)
G154173 NA non-coding upstream 555455 11640028 ~ 11641512 (-)
LOC120574486 NA other downstream 1112 11078545 ~ 11080607 (-)
LOC120574455 NA other downstream 290154 10784112 ~ 10791565 (-)
gtpbp1 gtpbp1,LOC104924447,LOC102799794 other downstream 691543 10352158 ~ 10390176 (-)
LOC120574648 NA other downstream 1258726 9822145 ~ 9822993 (-)
LOC120574583 NA other downstream 1344885 9735626 ~ 9736834 (-)
tnrc6c1 LOC103361861 other upstream 13743 11098316 ~ 11137528 (-)
G154033 NA other upstream 118877 11203450 ~ 11225546 (-)
LOC120574419 NA other upstream 1001412 12085985 ~ 12090981 (-)
cep112 NA other upstream 1342931 12427504 ~ 12565471 (-)
LOC120575506 LOC100697827 other upstream 1650871 12735444 ~ 12737483 (-)

Expression


Co-expression Network