LOC120574499 (LOC101164155,LOC101071797)


Basic Information

Item Value
gene id LOC120574499
gene name LOC101164155,LOC101071797
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 16282880 ~ 16296424 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824839.1
TTCAGTTGGTCAGACCATTCAGAGGGAAAAAATACCTACTGTACTGTGACAAATGTGAGTACAAGGTACTATCAATCAATGTCAATGTCAATGTCACAGGATTAGCACAAGACGAGAAGAATGCATGACCAAACTAAGGAAGGCACACCTACTGAGGAGACAGTCCTCCCTCTATAAAAGAGGCTGCTGAGGACTCTGTCAATAACTGGTAGGCTTCCTACTCAGGATAAAAAGAACAGACCTGACTCCATCTTCCGTTTGGACCAAAGGAGGCGCTTAAGGTGCCATCATGAGCACAGACGCAGAGATGGAGGCCTATGGCCCCGCGGCCATTTACCTCCGAAAACCAGAGAGGGAGCGGATTGAGGCTCAGACTTCTCCATTTGATGCCAAAACAGCCTTCTTTGTGGCTGATCCTGATAACATGTATTCCAAGGGAAAACTCATCAAAAGAGAGGGTGGCAAAGCCACAGTTGAGACACTGGCACTAGAAGGAAAGGAGTCAAAGACTCTCACTGTAAAAGAAGAGGACATCCATGCCATGAACCCTCCCAAGTACGATAAAATTGAAGACATGGCCATGATGACCCACCTCAATGAGCCTGCTGTGCTTTATAACCTCAAAGAGCGTTTTGCATCATGGATGATCTACACCTACTCTGGCCTGTTCTGTGTCGTGGTGAACCCCTACAAGTGGCTTCCTGTGTACGATGCTCAGGTTGTTAATGCATACAGAGGCAAGAAGAGGATTGAGGCTCCACCACACATCTTCTCCATCTCTGATAATGCCTATCAGTTCATGCTCACTGATCGTGAGAACCAGTCTGTCCTTATCACTGGAGAATCTGGTGCAGGAAAGACTGTCAACACCAAGCGTGTCATCCAGTACTTTGCAACAATTGCAGTGGCTGGAGCTAAGAAACCAGAAAGTGGAAAAATCCAGGGTTCGCTGGAAGATCAAATCATTGCAGCCAACCCTCTACTAGAGGCCTATGGTAATGCCAAGACTGTGAGGAATGACAACTCCTCTCGTTTTGGTAAATTCATCAGAATCCACTTTGGCTCTAGTGGCAAGCTGGCCTCAGCTGATATCGAAACGTATCTGCTGGAGAAGTCCCGTGTCACTTTCCAGTTGTCTGCTGAGAGAAGCTACCACATCTTCTATCAGCTGATGACTGGCCACAAGCCTGAGCTCCTGGAGGCCCTTCTAATTACTACCAACCCGTATGACTACCATATGATCAGTCAGGGTGAAATCACTGTCAAAAGCATCAATGATGTGGAGGAGTTCATTGCAACCGATACTGCTATTGACATCTTGGGCTTCACTGCTGAGGAGAAGATTGCCATCTACAAGCTGACTGGAGCTGTGATGCATCATGGTAACATGAAATTTAAGCAGAAACAGCGTGAGGAGCAGGGTGAACCTGATGGCACTGAGGAGGCTGATAAAATTGCCTACCTCATGGGCCTGAATTCAGCTGACATGCTAAAAGCTCTGTGCTACCCAAGAGTCAAGGTTGGAAACGAGATGGTGACCAAAGGTCAGACCGTACCACagGTCTACAATGCTGTCAGTGCTCTGTGCAAGTCCgtctatgagaaaatgttcTTGTGGATGGTCATCCGTATCAATGAGATGCTAGACACAAAGCAGCCAAGACAGTTCTTCATTGGGGTGTTGGATATCGCTGGATTTGAGATCTTTGATTACAACAGCTTGGAGCAACTCTGTATCAACTTTACCAATGAGAAACTACAGCAGTTCTTCAACCACCACATGTTTGTCCTGGAGCAAGAGGAGTACAAGAAAGAAGGCATTGAATGGGAGTTCATTGACTTTGGTATGGACTTGGCTGCCTGCATTGAGCTTATCGAGAAGCCAATGGGCATTTTCTCCATTCTTGAAGAGGAGTGCATGTTCCCCAAGGCTACAGACACTTCATTTAAGAACAAGCTGCATGATCAGCATCTTGGCAAGACCAAGGCCTTTGAGAAGCCCAAGCCTGGAAAGGGCAAGGCTGAGGCTCACTTCTCCCTGGTTCACTATGCTGGTACAGTGGACTACAATATAACTGGCTGGCTGGACAAGAACAAGGACCCCCTGAATGACTCAGTTGTTCAACTCTACCAAAAATCTGCAAACAAACTGCTGGCAATGCTGTATGCAGCCCATGCTTCGACCGAGGAATCTGGTGGTGGCAAAAAGGGTGGTGGAAAGAAGAAAGGTGGTTCCTTCCAGACTGTGTCTGCTCTTTTCAGGGAGAACTTGGGCAAGCTGATGACCAACTTGAGGAGTACTCATCCTCATTTTGTGCGCTGCCTGATTCCTAATGAATCAAAGACCCCAGGTCTTATGGAGAACCACTTGGTCATCCACCAGCTGAGGTGTAACGGTGTGCTGGAAGGCATCAGAATCTGCAGAAAGGGCTTCCCCAGCAGAATCCTCTATGGTGACTTCAAGCAGAGATACAAAGTATTAAATGCTAGTGTCATCCCCGAGGGACAGTTCATTGACAACAAGAAAGCTTCAGAGAAGCTGCTGGGCTCCATTGATGTGGACCACACTCAGTACAAGTTTGGACACACAAAGGTGTTCTTCAAAGCTGGTCTGCTGGGTACCCTGGAAGAGATGAGAGATGACAAACTGGCTTCACTGGTGACAATGACTCAGGCTCTTTGCAGAGGTTTCCTTATGAGGAGAGAGTTTGCTAAGATGATGGAGAGGAGaGATGCAATCTTCGCCATCCAGTACAACATCAGATCATTCATGAATGTGAAGAACTGGCCATGGATGAATCTGTACTTCAAGATCAAGCCTCTTCTGAAGAGTGCTGAGACTGAGAAGGAGCTGGCTCAGATGAAAGATAACTATGATAAGATGAAAACAGACCTGGCTACTGCCCTGGCCAAGAAGAAGGAACTGGAGGAGAAGATGGTTTCCCTGCTGCAGGAAAAGAATGACCTGCAACTGCAAGTAGCATCTGAAAGTGAGAACCTGTCTGATGCTGAGGAAAGGTGTGAGGGGCTCATTAAGAGCAAAATCCAACTTGAGGCCAAACTCAAAGAGACAACTGAAAGactggaggatgaagaggaaatgAATGCAGAGCTGACTGCCAAGAAGAGGAAGCTGGAGGATGAATGCTCTGAGCTGAAGAAAGACATTGATGACTTGGAGCTCACCTTGGCTAAAGTGGAAAAGGAGAAACATGCCACAGAAAACAAGGTCAAAAACCTGACAGAGGAGATGGCATCTCAAGATGAGTCTATTGCCAAGTTAACCAAGGAGAAGAAAGCCCTCCAAGAGGCCCACCAGCAAACACTTGATGATCTCCAGGCAGAGGAAGATAAAGTCAACACTCTGACCAAGGCCAAGACTAAGCTGGAACAGCAAGTGGACGATctTGAGGGATCACTGGAGCAAGAGAAGAAGCTCCGCATGGACCTTGAGAGAGCCAAGAGGAAGCTTGAGGGAGATCTGAAACTGGCCCAGGAATCCATAATGGATCTGGAGAATGACAAGCAGCAATCTGATGAGAAACTGAAGAAGAAGGACTTTGAGACCAGCCAGCTTCTCAGCAAGATTGAAGATGAACAGTCTCTTGGTGCTCAGTTTCAGAAGAAGATCAAGGAACTGCAGGCTCGTATTGAGGAGCTTGAGGAAGAGATTGAAGCTGAGAGGGCTGCTCGGGCGAAGGTAGAGAAGCAGAGGGCGGACCTCTCCAGGGAGCTGGAGGAGATCAGCGAGAGGCTTGAGGAAGCTGGAGGAGCAACAGCCGCTCAGATTGAGATGAACAAGAAGCGTGAAGCTGAGTTCCAGAAGCTGCGTCGTGATCTTGAAGAGTCGACCCTGCAGCATGAAGCTACCGCAGCAGCTCTCCGCAAGAAGCAGGCCGACAGTGTTGCAGAGTTGGGAGAGCAGATCGACAACCTCCAGCGTGTAAAGCAGAAGCTGGAGAAGGAGAAGAGCGAGTACAAGATGGAGATTGATGACCTTTCCAGCAACATGGAGTCTGTTGCCAAAGCAAAGACCAATCTGGAGAAAATGTGCCGAACTCTTGAAGACCAATTAAGTGAACTCAAGAGCAAAAATGATGAGAACGTTCGCCAGCTAAATGACCTCAGTGCACAGAGGGCAAGACTGCAAACAGAGAACGGTGAGTTCACTCGCCAGGTGGAGGAGAAGGAAGCTCTTATTTCCCAGTTCACCAGAGGCAAACAGGCTTACACTCAGCAGATTGAAGAACTTAAGAGACACATTGAGGAGGAAGTGAAGGCCAAGAACGCCCTGGCCCATGCTGTTCAGTCAGCCCGCCATGACTGTGATCTGCTCAGAGAGCAGtttgaggaggagcaggaggccaAGTCTGAGCTGCAGCGAGGAATGTCCAAGGCCAACAGCGAGGTGGCTCAGTGGAGAAGCAAATATGAGACTGATGCTATTCAGCGCACTGAGGAACTGGAGGAGGCAAAGAAAAAGCTTGCCCAGCGCCTGCAGGATGCTGAGGAATCCATTGAGGCTGTGAACTCTAAGTGTGCCTCTCTGGAAAAGACCAAGCAGAGGCTGCAGGCGGAGGTGGAGGACCTTATGATTGATGTGGAGAGAGCTAATGGTCTGGCTGCCAACCTTGACAAGAAGCAGAGGAACTTTGATAAGGTCCTGGCAGAATGGAAACAGAAATATGAGGAGAGCCAGGCAGAGCTGGAAGGAGCCCAAAAGGAGGCTCGTTCTCTCAGCACTGAACTGTTTAAGATGAAGAACTCTTATGAGGAGGCTCTTGATCAGCTGGAGACCATGAAAAGAGAGAACAAGAACCTGCAGCAGGAGATCTCAGATCTGACTGAACAGATTGGTGAGACTGGAAAAAGCATCCATGagctggaaaaagcaaaaaagacagtagaaagtGAGAAGGTTGAAATTCAGACTGCCCTGGAGGAAGCAGAGGGTACACTGGAGCATGAGGAGTCCAAGATTCTCCGTATTCAACTTGAGCTCAACCAGGTCAAAAGTGAGGTTGACAGAAAGCTGTCCGAGAAGGATGAGGAGATGGAGCAGATCAAGAGGAACAGCCAGAGGGTGATAGACTCCATGCAGAGCACTCTGGATGCTGAGGTCAGGAGCAGGAATGATGCCCTGAGAATCAAGAAGAAGATGGAGGGAGACCTGAATGAGATGGAGATTCAGCTGAGCCATGCCAACAGGCAGGCTGCTGAGGCCCAGAAACAACTGAGGAATGTCCAGGGACAGCTCAAGGATGCCCAACTGCACCTTGATGATGCTGTCAGAGGACAGGAAGACATGAGGGAGCAGGTTGCCATGGTGGAGCGTAGAAATGGCCTGATGCTGGCTGAGATTGAGGAGCTGAGAGCCGCTCtggagcagacagagagaggacgcAAAGTGGCTGAGCAAGAGTTGGTTGATGCTAGTGAGCGTGTCGGACTGCTTCATTCTCAGAACACCAGTCTTCTGAACACCAAGAAGAAGTTGGAGACTGACTTTGTCCAGGTTCAGGGTGAAGTGGAGGATTTAGTTCAGGAATCAAGAAATGCTGAGGAGAAAGCCAAAAAGGCCATCACTGATGCTGCCATGATGGCCGAGGAGCTGAAAAAGGAGCAGGACACCAGTGCTCACCtagagaggatgaagaagaacctGGAGGTCACAGTAAAGGACCTGCAGCACCGTCTGGATGAGGCTGAGAACCTCGCCATGAAGGGTGGCAAGAAGCAGCTCCAGAAACTGGAGTCCAGGGTGCGTGAGCTGGAAGCTGAAGTTGAGGGTGAGCAGAGACGTGGAGCTGACGCTATTAAAGGTGTCCGCAAATATGAGAGGAAAGTGAAGGAGCTGATCTACCAGACTGAGGAGGACAAGAAGAATGTGACCAGACTTCAGGATCTGGTGGACAAGCTGCAGCTCAAAGTCAAGGCTTACAAGAGACAGGCTGAGGAGGCTGAGGAGCAGGCCAACACTCACATGTCCAGGCTGAGAAAGGTTCAGCATGAGCTGGAGGAAGCTCAGGAGCGTGCTGACATCGCTGAGTCCCAGGTCAACAAGCTGAGAGTCAAGAGCCGTGATGCTGGAAAGGGAAGTGACTCTGCTGAATGAGATACAAGAGCCGGCTGAGGCATGAGTTCATACAATATGAGCCACTGAGAATTTTCTTCTGTTAACCGTCAATAAATGTTAATCATGACTCAAGta

Function

NR:

description
fast skeletal myosin heavy chain isoform mMYH-11

GO: NA

KEGG:

id description
K24220 MYH1s; myosin heavy chain 1/2/3/4/8/13/7B/15

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824839.1 True 6211 mRNA 0.49 41 16282880 16296424

Neighbor

gene id symbol gene type direction distance location
brd4 LOC104952514,LOC103370560 coding downstream 53023 16221359 ~ 16229857 (-)
lpar2a lpar2,LOC104918571,LOC103392869 coding downstream 67487 16208250 ~ 16215393 (-)
LOC120574526 LOC103364137,LOC104952516,LOC108256828 coding downstream 174984 16106007 ~ 16107896 (-)
LOC120574529 NA coding downstream 178272 16101744 ~ 16104608 (-)
vac14 vac14 coding downstream 183891 16095711 ~ 16098989 (-)
nr5a5 LOC104952484,LOC103370553 coding upstream 44670 16341094 ~ 16344963 (-)
soul5 NA coding upstream 49954 16346378 ~ 16348909 (-)
notch3 LOC103358203,LOC104952487 coding upstream 72182 16368606 ~ 16397486 (-)
rdh8a rdh8,LOC103358204,LOC102201298 coding upstream 137199 16433623 ~ 16439841 (-)
trip10a trip10,LOC104918559,LOC103358209 coding upstream 302834 16599258 ~ 16615856 (-)
G155508 NA non-coding downstream 1312 16280383 ~ 16281568 (-)
G155507 NA non-coding downstream 2656 16279491 ~ 16280224 (-)
G155500 pet100 non-coding downstream 20850 16259819 ~ 16262030 (-)
G155493 NA non-coding downstream 59630 16204528 ~ 16223250 (-)
G155481 NA non-coding downstream 110575 16170923 ~ 16172305 (-)
G155512 NA non-coding upstream 4123 16300547 ~ 16300761 (-)
G155532 LOC103358202,LOC104952486,LOC100696339 non-coding upstream 69578 16366002 ~ 16366852 (-)
G155619 NA non-coding upstream 408111 16704535 ~ 16725040 (-)
G155637 LOC101467188,LOC102307478,LOC102778330 non-coding upstream 435917 16732341 ~ 16733171 (-)
G155644 NA non-coding upstream 444988 16741412 ~ 16742961 (-)
LOC120574432 LOC103392867,LOC102312066,LOC104952514,LOC105932031,LOC102787456,LOC101484431,LOC102198284 other downstream 23855 16230459 ~ 16259025 (-)
LOC120574545 chchd5 other downstream 126813 16153787 ~ 16156067 (-)
G155323 LOC108415010,LOC101162128,LOC104945817 other downstream 467511 15813058 ~ 15815369 (-)
LOC120574502 LOC103367168,LOC100699371,LOC108241234,LOC101473146,LOC106529605 other downstream 494365 15746791 ~ 15788515 (-)
LOC120574537 NA other downstream 537308 15741763 ~ 15745572 (-)
G155583 eif3g other upstream 273022 16569446 ~ 16642131 (-)
angptl6 angptl6 other upstream 325402 16621826 ~ 16626733 (-)
mgrn1b mgrn1 other upstream 715987 17012411 ~ 17023208 (-)
polr3k polr3k other upstream 736561 17032985 ~ 17035040 (-)
unkl unkl,LOC102789129 other upstream 849684 17146108 ~ 17162165 (-)

Expression


Co-expression Network