LOC120574526 (LOC103364137,LOC104952516,LOC108256828)


Basic Information

Item Value
gene id LOC120574526
gene name LOC103364137,LOC104952516,LOC108256828
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 16106007 ~ 16107896 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824899.1
TTCAAGCACTTGAGTTTTGAGACACTCGCCTATCTTGCTGTGGACATGCACACAGCCATTCTTGTGTATTACGTTTGAACTATTTTACAGTGAACATTAAGAGCTGCTTGACAGCAACAACTCGTCCGTGTGCATATCCGCGCCCAGCAGATATCTATCCGAACCATGTCGACAGTCTTCTCTTTCCAGACACAGCTCGTCTCCATCATGGACGCGTTATCCAAAACAGCTGTAATGGAAATAAGCAAACTGGTCGACATCGAGTCTAAGATGCTAAAAATTGAGATAACTCGAGGGCGGAACGAAATAGCCTCGCTCACAGAGAAACTGCAGCTGATGGAGAAATTGCTTTATCTTGCACAGGGGGGCAGGCAGGACGCAGCCGCATGCTCAGTGCTGAGGGACGGTTCAGAGGAGGGAATATTGGAGTCTGGCAGAACAAGACCTGCCATAAAAAGTGAAAGTCTGTGGGAAAGCACAAGTTCCTCCAATGAGATGAGCAAGTGGCATCATCTTCAAACGGAAGAGCATGCCATAACTGAACTCCCAAACCCACTGAAAGAGCAGCCTGAACTGATAGTGGTAAAAGAAGAGCCGACAGAGGTGGACAGCAGAGACCGTGAACAAGATAGGACAAGTGAAAACAGAAGGAAAACATTCACAGACAACGGGAAGAGCCCAGAAGTGATGCAGTGTCTCAAACCCGTTCCAGAACGTCAGCAGCCTCTGTTTAATGACAGCTTTGTGACAATGAGCACCCAGCCGTCTCTCGCTGGACCAGGGAGGAAGGAAACACAGTGGAATCCACAGCTtacacctgcacacacaaaccTAGTGGCTGGGAAAAGCATGGCTCAAAATGTTGCCTCCCAAAGCTTAAGTGTGCTCAGGAATATGAAGCTCCACAACTTGAGGAACTCCGCTGCAAAGAGGTTTGGCTGCTTGCAGTGCGGCAAGAGCTTCAGATGCTTTAGCCAGCTCGAAATACACCAGAGAagtcacacaggagagaaaccgttTAGGTGCACACTGTGTGGAAAGAGATATGCACAAAAAGGTCATCTctacacacaccagcgcacacaCACTGGGGAGAAGCCCTACCGATGTCCTATTTGTGGAAAGGGCTTCATTCAGAAATGCACTCTCGATATGCATCAGCGTACACACACCGGAGAAAAACCCTTTGTTTGTATCAAATGTGGCAAGGGCTTTACCAAGAACTGTAATCTGAAAAAACATCTCACAGTACATCTAGATCCTAGTTTGAACATGTATGGTAGTGAATCTAGTGTACCAACATTTAGTGGGACTTTCATAAATGGAACCACTTAAAACAGCCAGTCAAATGTAACTTCTACTGTTTGATTGAAATAGTTTGTGCATAATAAATCCAAATACAAATTTGA

Function

NR:

description
PREDICTED: oocyte zinc finger protein XlCOF8.4-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824899.1 True 1409 mRNA 0.46 4 16106007 16107896

Neighbor

gene id symbol gene type direction distance location
LOC120574529 NA coding downstream 1399 16101744 ~ 16104608 (-)
vac14 vac14 coding downstream 7018 16095711 ~ 16098989 (-)
trim35-13 LOC103364132,LOC102792268,LOC102305948,LOC101478242 coding downstream 13282 16089414 ~ 16092725 (-)
adgrl1a adgrl1,LOC103392844 coding downstream 115822 15894009 ~ 15990185 (-)
tmed1a tmed1 coding downstream 268939 15833500 ~ 15837068 (-)
lpar2a lpar2,LOC104918571,LOC103392869 coding upstream 100354 16208250 ~ 16215393 (-)
brd4 LOC104952514,LOC103370560 coding upstream 113463 16221359 ~ 16229857 (-)
LOC120574499 LOC101164155,LOC101071797 coding upstream 174984 16282880 ~ 16296424 (-)
nr5a5 LOC104952484,LOC103370553 coding upstream 233198 16341094 ~ 16344963 (-)
soul5 NA coding upstream 238482 16346378 ~ 16348909 (-)
G155439 NA non-coding downstream 51251 16053990 ~ 16054756 (-)
G155359 NA non-coding downstream 214076 15891021 ~ 15891931 (-)
LOC120574547 NA non-coding downstream 280353 15822991 ~ 15825654 (-)
G155307 LOC104918593,LOC104960307,LOC103367166 non-coding downstream 331699 15728933 ~ 15774308 (-)
G155298 LOC108429687,LOC105910964,LOC100700452,LOC104918597,LOC103367163,LOC101470440 non-coding downstream 410449 15694773 ~ 15695558 (-)
G155460 NA non-coding upstream 2803 16110699 ~ 16112063 (-)
G155461 NA non-coding upstream 7212 16115108 ~ 16115522 (-)
G155462 colgalt1 non-coding upstream 9223 16117119 ~ 16118492 (-)
G155481 NA non-coding upstream 63027 16170923 ~ 16172305 (-)
G155493 NA non-coding upstream 96632 16204528 ~ 16223250 (-)
G155323 LOC108415010,LOC101162128,LOC104945817 other downstream 290638 15813058 ~ 15815369 (-)
LOC120574502 LOC103367168,LOC100699371,LOC108241234,LOC101473146,LOC106529605 other downstream 317492 15746791 ~ 15788515 (-)
LOC120574537 NA other downstream 360435 15741763 ~ 15745572 (-)
tecra LOC103367165,LOC101076261,LOC106932487,LOC104960308,LOC108241336,LOC106529633,LOC103151989 other downstream 381585 15717847 ~ 15724422 (-)
metrnla metrnl,LOC102778978 other downstream 656490 15443124 ~ 15449517 (-)
LOC120574545 chchd5 other upstream 45891 16153787 ~ 16156067 (-)
LOC120574432 LOC103392867,LOC102312066,LOC104952514,LOC105932031,LOC102787456,LOC101484431,LOC102198284 other upstream 122563 16230459 ~ 16259025 (-)
G155583 eif3g other upstream 461550 16569446 ~ 16642131 (-)
angptl6 angptl6 other upstream 513930 16621826 ~ 16626733 (-)
mgrn1b mgrn1 other upstream 904515 17012411 ~ 17023208 (-)

Expression


Co-expression Network