crb3a (crb3)


Basic Information

Item Value
gene id crb3a
gene name crb3
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 15670165 ~ 15673455 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824925.1
GGGGAGGGGAGGGTAGTACAGTTAAACATTGCCACTCCAGCAGGTTGGAGCAAGTGACAGCAACCTGGCATCATACAAGAAAAGTTCATCTTAATTCAAGTATCAGGAGGagtatctgtcctctctgctgcAGGTGGATAACTGCGCTCAGGTGAGCCGGAAGCGAGAATCAACCTGTTCGATGTTTCCCGTTTTGCTGCGATCACCTGAAAACAGCCGGATCAATGATGGGCGATAAATCCACACTGTGAATGTTGGCCCTAATGAAATGGACCCAAGCTAATGCCCCAAAGTCCCAGTCTGCTCTCCCTTTGCCCTGCTGGTCACGGGTAGAGATGGCAGTGTGTCCGGATGTGCTGGCCATGCCTGGAGTTGTGGTCAGGAGTGTTCTTCTTCTTGCACTGAGCAATAAGCCTGTGTGGGGGAATAATACTATGCTTGAAAGTGACACACGTTCTAATAACACTGCTGGACCCAACATTGCAGCTATCGTGGCCCCTACAGTCACCCTGGGTGTTCTGGCCATAATCTTGGCTGTTCTCGGCTGGCTCCTCTGCGTGGTGAAAAAGAAGAGACAGACTGAAGGGACGTATAGACCCAGTTCTGAGGAACAGTCTGGTGCACATGGTGTGGCAGTACCAGATGCACTAAAGTTACCAAAAGAGGAAAGACTCATTTGACATTTTGTGCTTTATGTTTCTACAAAGTCCTGCAAACATTTGCATAGCAGATCTTTTGAGCTGATTAATGAAAGAAAAATCTCTCCAGGTTTAAGAGAGCACATATTGCAAAGTTTGAGCTTTCATTTCAACAAGCACTGAACGGTTCCTGCATGGCACTATGAAGAAATGCCCCTGGATGGATCTAGCTGATTTCAAGAACAATTGGACATTTCAAGGAGGTTTTGAACAATTCCTCCCCACAAATTACACAAGAGTTTCAGTATTTTATCATCATTAATCATTTTAGGTTAGAGctgttttttcttgttttagtTGCCATTTACcatatttttgatttgattcagTCTATTATGAAATACTGTCACTGGCAAAAATCTATAGCAATCTTTTACCTCAAACTAATTATTTGTCTTGCTGGAGTCCTAATGAGTCCATTGCATCAAGACAGATGTTTTTTAGTCAAAAATGACTGTAATTAAACATGCAAAAACTATTGATTTTATAAAGGAAGCTGTATGTTAAAAATTAGGTTATACTGAGAAAATATATTGAGCAAAAGCAA
>XM_039824926.1
GGGGAGGGGAGGGTAGTACAGTTAAACATTGCCACTCCAGCAGGTTGGAGCAAGTGACAGCAACCTGGCATCATACAAGAAAAGTTCATCTTAATTCAAGTATCAGGAGGTGAGCCGGAAGCGAGAATCAACCTGTTCGATGTTTCCCGTTTTGCTGCGATCACCTGAAAACAGCCGGATCAATGATGGGCGATAAATCCACACTGTGAATGTTGGCCCTAATGAAATGGACCCAAGCTAATGCCCCAAAGTCCCAGTCTGCTCTCCCTTTGCCCTGCTGGTCACGGGTAGAGATGGCAGTGTGTCCGGATGTGCTGGCCATGCCTGGAGTTGTGGTCAGGAGTGTTCTTCTTCTTGCACTGAGCAATAAGCCTGTGTGGGGGAATAATACTATGCTTGAAAGTGACACACGTTCTAATAACACTGCTGGACCCAACATTGCAGCTATCGTGGCCCCTACAGTCACCCTGGGTGTTCTGGCCATAATCTTGGCTGTTCTCGGCTGGCTCCTCTGCGTGGTGAAAAAGAAGAGACAGACTGAAGGGACGTATAGACCCAGTTCTGAGGAACAGTCTGGTGCACATGGTGTGGCAGTACCAGATGCACTAAAGTTACCAAAAGAGGAAAGACTCATTTGACATTTTGTGCTTTATGTTTCTACAAAGTCCTGCAAACATTTGCATAGCAGATCTTTTGAGCTGATTAATGAAAGAAAAATCTCTCCAGGTTTAAGAGAGCACATATTGCAAAGTTTGAGCTTTCATTTCAACAAGCACTGAACGGTTCCTGCATGGCACTATGAAGAAATGCCCCTGGATGGATCTAGCTGATTTCAAGAACAATTGGACATTTCAAGGAGGTTTTGAACAATTCCTCCCCACAAATTACACAAGAGTTTCAGTATTTTATCATCATTAATCATTTTAGGTTAGAGctgttttttcttgttttagtTGCCATTTACcatatttttgatttgattcagTCTATTATGAAATACTGTCACTGGCAAAAATCTATAGCAATCTTTTACCTCAAACTAATTATTTGTCTTGCTGGAGTCCTAATGAGTCCATTGCATCAAGACAGATGTTTTTTAGTCAAAAATGACTGTAATTAAACATGCAAAAACTATTGATTTTATAAAGGAAGCTGTATGTTAAAAATTAGGTTATACTGAGAAAATATATTGAGCAAAAGCAA

Function

symbol description
crb3 Enables SH3 domain binding activity. Involved in protein localization to plasma membrane. Located in cell junction.

NR:

description
PREDICTED: protein crumbs homolog 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824925.1 True 1245 mRNA 0.42 6 15670165 15673455
XM_039824926.1 False 1203 mRNA 0.42 5 15670165 15673455

Neighbor

gene id symbol gene type direction distance location
LOC120574497 LOC104960315,LOC103367159 coding downstream 5568 15662274 ~ 15664597 (-)
gcgra LOC103367158 coding downstream 24543 15605503 ~ 15645622 (-)
trnae-cuc_25 NA coding downstream 105961 15564133 ~ 15564204 (-)
zgc:103625 LOC104960319,LOC103356288,LOC100689735 coding downstream 111428 15557080 ~ 15558737 (-)
rsad1 rsad1,LOC102775824 coding downstream 135639 15530445 ~ 15534526 (-)
qtrt1 qtrt1 coding upstream 116596 15790051 ~ 15796449 (-)
tmed1a tmed1 coding upstream 160045 15833500 ~ 15837068 (-)
adgrl1a adgrl1,LOC103392844 coding upstream 220554 15894009 ~ 15990185 (-)
trim35-13 LOC103364132,LOC102792268,LOC102305948,LOC101478242 coding upstream 415959 16089414 ~ 16092725 (-)
vac14 vac14 coding upstream 422256 16095711 ~ 16098989 (-)
G155239 NA non-coding downstream 37329 15551004 ~ 15632836 (-)
G155242 hgs non-coding downstream 115279 15554043 ~ 15554886 (-)
G155234 LOC106925874,LOC103468796,LOC106529779,LOC106946608 non-coding downstream 126148 15541557 ~ 15544017 (-)
G155232 LOC104918633,LOC103356299,LOC102214648,LOC102291995,LOC101464722,LOC100701808 non-coding downstream 142560 15526949 ~ 15527605 (-)
G155151 NA non-coding downstream 265596 15368229 ~ 15404569 (-)
G155295 NA non-coding upstream 8914 15682369 ~ 15691652 (-)
G155298 LOC108429687,LOC105910964,LOC100700452,LOC104918597,LOC103367163,LOC101470440 non-coding upstream 21318 15694773 ~ 15695558 (-)
G155307 LOC104918593,LOC104960307,LOC103367166 non-coding upstream 55478 15728933 ~ 15774308 (-)
LOC120574547 NA non-coding upstream 149536 15822991 ~ 15825654 (-)
G155359 NA non-coding upstream 217566 15891021 ~ 15891931 (-)
metrnla metrnl,LOC102778978 other downstream 220648 15443124 ~ 15449517 (-)
LOC120574278 LOC104940298,LOC103361237,LOC102197797,LOC102781856,LOC104946382 other downstream 530312 15106757 ~ 15139853 (-)
LOC120573850 LOC106674513,LOC106098575 other downstream 659825 15009798 ~ 15010340 (-)
LOC120573849 LOC106675063,LOC102783976,LOC102313472,LOC102290019,LOC102295680 other downstream 661453 15003013 ~ 15008712 (-)
ush1ga LOC104944226,LOC103373181,LOC103392806,LOC106949104,LOC104925058,LOC103140944 other downstream 780683 14879627 ~ 14889482 (-)
tecra LOC103367165,LOC101076261,LOC106932487,LOC104960308,LOC108241336,LOC106529633,LOC103151989 other upstream 44392 15717847 ~ 15724422 (-)
LOC120574537 NA other upstream 68308 15741763 ~ 15745572 (-)
LOC120574502 LOC103367168,LOC100699371,LOC108241234,LOC101473146,LOC106529605 other upstream 73336 15746791 ~ 15788515 (-)
G155323 LOC108415010,LOC101162128,LOC104945817 other upstream 139603 15813058 ~ 15815369 (-)
LOC120574545 chchd5 other upstream 480332 16153787 ~ 16156067 (-)

Expression


Co-expression Network