ccdc137 (ccdc137)


Basic Information

Item Value
gene id ccdc137
gene name ccdc137
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 14964295 ~ 14969477 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824988.1
GCGTTTGAGGCAAACTCGTCCACGAGGAGCGTAGATCCTCTATACTGTCTCTAATATTATCTAAATAACCACGGTACCGAAAAAGTGAACGAGTGAGAGCTTCTTacttcctccctccctgtcGCCGAGGTTGTGGTTTGTAGTGTATGGTATACACGCTGCACCACatgtgttattgttttgttaAGGCAATTTGTAATTAATTGTAATAAACTACAGTGGCATGGGGAAGAATAAGAAGAACAAAACCAAAGAGTTGGGTACACAGGCGGGCAAGGCCGGACAACATTCAAGTGATAAAAAGCTCAAACGAGATGGTAAACCCAAGAAAGCCAAACAAGACCACCTCGAACACATCCCCTTTAAACTCCGAGAGATAATGAAGAGCAAGGAGAGAATGAAAACTGGACCCTTGAACACCAAAAAGCTTAAAGAGGCCATCTCCCCTAAAGGTAAACCAGACGATTCCGAAAGTGGAGACATACCTGTCCCACATTTCAGGAGGGGAAAGGCGGAAAGTGAGAAAGCATACCTACGGCGCATGGAGAATGAGACAAAACACGTCCTCTTTCTCACAAAGAACCAAGTAGACAGAAAGCCTGAGCTGGATGCAGACAAACAAGAGAGGCCCGCAGACACGGGCAAGTCTGAGAAAAAGAAGGAGCATGATAAAGTCAGATTACAGAGGCTACATCAGAAAAAGTTGGACAGACAAGAGGACaagatggaaaaagagaggtTTGTAGatTATGTTCCCTTTGGTGAAGTTGCAATGGCCCCGCCGTCTTTCAGCGCCAAACCCAAGAAAGCTCCAGTCAGATCTCAGAAGGCATCAAAGGAGCTGCTTCTCAACTCTCTCTTAGGCCACACGGTGATCTCCACAGCCAAGCCCTCCATGGCCAGACAGAGAATcatggaggaagagagggagcgagCAGTGGAGGCCTACCGCCTTcttaagaaacagaaacaacagCAGCATGAGGCCAGGGCTGCTAATCTGGAAAAACTTAGGAACCCTCAgtgatgttttatttgtaatttagAAGTCCCTGACTTCAGTCAGCAGTGAAGCACAGAAACTGAAACAATGAAAGATAACCATCAGCAGactgtaatgtactgtatgtgtgatggAACTGGAACTGCCAGTGTGGGACCTTACCACAGCGTAGCTAACTGTCAGGGAAATAAGTAAACATTTGAATCTGCTGCCCACAGTATGAGGTAAGTAGTGATCAACATTCACCTGCCACTTTCACTGTCAAATATTTAGCTccaaagagaacaggacattcAAATTGTTAATGCACGTTTAAATGCCTTATTAAGACAGATTCACCCCTAACTACGTACATTGAGACAGGTTGATTTCTCGCCCTCAAACTGTGTCAGATGTTCACTCGCAGCCATGGTGTTTGGTTGTATTTACACTGTTTTTGTATTTGCGTATTTAGATAGTCACTATGACGTCATTTGTGATGTGGTAGACAATAAAATCATAAAGGCTATGTCAAGGCAAAGATAAACCTTCAATTATTTGCTGTTGTCCCACTAGATGGCAGTCCTCCTGCAGAAAGCTGCTTTCATGTTTGTATGGAGAGCAGAACATGCACACTGAATTGTTTtggactttaaaaaaacaaaaaaaaagagtaaatcTGTTTTTGATGGCA
>XM_039824989.1
GGGAAAAGTTGGCCTGAGTATTTTTTAGATGCCGTAGCTCCGTCAACATAGTTTAATGATtcatttaactttattgaagaaaGTATATTGGCGAACTAAAACTAAAGTGATAAAAAGCTCAAACGAGATGGTAAACCCAAGAAAGCCAAACAAGACCACCTCGAACACATCCCCTTTAAACTCCGAGAGATAATGAAGAGCAAGGAGAGAATGAAAACTGGACCCTTGAACACCAAAAAGCTTAAAGAGGCCATCTCCCCTAAAGGTAAACCAGACGATTCCGAAAGTGGAGACATACCTGTCCCACATTTCAGGAGGGGAAAGGCGGAAAGTGAGAAAGCATACCTACGGCGCATGGAGAATGAGACAAAACACGTCCTCTTTCTCACAAAGAACCAAGTAGACAGAAAGCCTGAGCTGGATGCAGACAAACAAGAGAGGCCCGCAGACACGGGCAAGTCTGAGAAAAAGAAGGAGCATGATAAAGTCAGATTACAGAGGCTACATCAGAAAAAGTTGGACAGACAAGAGGACaagatggaaaaagagaggtTTGTAGatTATGTTCCCTTTGGTGAAGTTGCAATGGCCCCGCCGTCTTTCAGCGCCAAACCCAAGAAAGCTCCAGTCAGATCTCAGAAGGCATCAAAGGAGCTGCTTCTCAACTCTCTCTTAGGCCACACGGTGATCTCCACAGCCAAGCCCTCCATGGCCAGACAGAGAATcatggaggaagagagggagcgagCAGTGGAGGCCTACCGCCTTcttaagaaacagaaacaacagCAGCATGAGGCCAGGGCTGCTAATCTGGAAAAACTTAGGAACCCTCAgtgatgttttatttgtaatttagAAGTCCCTGACTTCAGTCAGCAGTGAAGCACAGAAACTGAAACAATGAAAGATAACCATCAGCAGactgtaatgtactgtatgtgtgatggAACTGGAACTGCCAGTGTGGGACCTTACCACAGCGTAGCTAACTGTCAGGGAAATAAGTAAACATTTGAATCTGCTGCCCACAGTATGAGGTAAGTAGTGATCAACATTCACCTGCCACTTTCACTGTCAAATATTTAGCTccaaagagaacaggacattcAAATTGTTAATGCACGTTTAAATGCCTTATTAAGACAGATTCACCCCTAACTACGTACATTGAGACAGGTTGATTTCTCGCCCTCAAACTGTGTCAGATGTTCACTCGCAGCCATGGTGTTTGGTTGTATTTACACTGTTTTTGTATTTGCGTATTTAGATAGTCACTATGACGTCATTTGTGATGTGGTAGACAATAAAATCATAAAGGCTATGTCAAGGCAAAGATAAACCTTCAATTATTTGCTGTTGTCCCACTAGATGGCAGTCCTCCTGCAGAAAGCTGCTTTCATGTTTGTATGGAGAGCAGAACATGCACACTGAATTGTTTtggactttaaaaaaacaaaaaaaaagagtaaatcTGTTTTTGATGGCA

Function

symbol description
ccdc137 Is expressed in immature eye; optic tectum; and paraxial mesoderm. Orthologous to human CCDC137 (coiled-coil domain containing 137).

NR:

description
coiled-coil domain-containing protein 137

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824988.1 True 1676 mRNA 0.44 6 14964295 14969235
XM_039824989.1 False 1489 mRNA 0.43 6 14964295 14969477

Neighbor

gene id symbol gene type direction distance location
btbd17b LOC103373589,LOC104944234 coding downstream 10022 14950264 ~ 14954273 (-)
LOC120575070 map2k6,LOC103373127,LOC100697168,LOC103392800,LOC102787166 coding downstream 14218 14936968 ~ 14950077 (-)
LOC120575176 NA coding downstream 89663 14869942 ~ 14874632 (-)
fscn2a LOC104925063,LOC104962304,LOC103373227,LOC101170272 coding downstream 216265 14740537 ~ 14748030 (-)
LOC120575160 tmem235,LOC104962294,LOC100710065,LOC101469204 coding downstream 234246 14717993 ~ 14730049 (-)
LOC120573908 tspan10 coding upstream 3875 14973352 ~ 14975399 (-)
LOC120574429 LOC105009787 coding upstream 29296 14998773 ~ 15000144 (-)
baiap2a baiap2,LOC103361233,LOC100696811 coding upstream 75482 15044959 ~ 15100591 (-)
LOC120574279 LOC103361235,LOC100701199,LOC102782133,LOC102300456 coding upstream 132504 15101981 ~ 15106625 (-)
hs3st3b1a LOC104940293,LOC103361242,LOC104959450,LOC101483888,LOC100697618 coding upstream 364885 15334362 ~ 15346560 (-)
G155039 NA non-coding downstream 449 14963233 ~ 14963846 (-)
G155025 NA non-coding downstream 68671 14895379 ~ 14895624 (-)
G154948 LOC104962285,LOC104925065 non-coding downstream 299624 14627750 ~ 14664671 (-)
G154953 cyth1,LOC103392816,LOC101076412 non-coding downstream 317226 14640102 ~ 14647069 (-)
G154952 cyth1,LOC103140955,LOC102194078 non-coding downstream 327493 14633178 ~ 14636802 (-)
G155047 NA non-coding upstream 15657 14985134 ~ 14985364 (-)
G155106 NA non-coding upstream 186952 15156429 ~ 15162435 (-)
G155126 NA non-coding upstream 342603 15312080 ~ 15313592 (-)
G155151 NA non-coding upstream 398752 15368229 ~ 15404569 (-)
G155232 LOC104918633,LOC103356299,LOC102214648,LOC102291995,LOC101464722,LOC100701808 non-coding upstream 557472 15526949 ~ 15527605 (-)
ush1ga LOC104944226,LOC103373181,LOC103392806,LOC106949104,LOC104925058,LOC103140944 other downstream 74813 14879627 ~ 14889482 (-)
LOC120575102 fam104b,LOC103373210,LOC101470236,LOC107083185,LOC102083140 other downstream 106715 14851939 ~ 14857580 (-)
LOC120574214 bahcc1,LOC106528540,LOC108241329,LOC107083174 other downstream 136056 14795646 ~ 14828239 (-)
LOC120574213 NA other downstream 173517 14765734 ~ 14790778 (-)
LOC120574989 LOC108241285,LOC103373333,LOC106518659 other downstream 420301 14533682 ~ 14543994 (-)
LOC120573849 LOC106675063,LOC102783976,LOC102313472,LOC102290019,LOC102295680 other upstream 33536 15003013 ~ 15008712 (-)
LOC120573850 LOC106674513,LOC106098575 other upstream 40321 15009798 ~ 15010340 (-)
LOC120574278 LOC104940298,LOC103361237,LOC102197797,LOC102781856,LOC104946382 other upstream 137280 15106757 ~ 15139853 (-)
metrnla metrnl,LOC102778978 other upstream 473647 15443124 ~ 15449517 (-)
tecra LOC103367165,LOC101076261,LOC106932487,LOC104960308,LOC108241336,LOC106529633,LOC103151989 other upstream 748370 15717847 ~ 15724422 (-)

Expression


Co-expression Network