LOC120574725


Basic Information

Item Value
gene id LOC120574725
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 12080475 ~ 12083704 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825116.1
GACGATGCAAACCGGAAGTCATGTTGTGGCAGCTAGCGAATAGGTCTCCGttagattagctagctagcagttgAGTTTATCTTCTTGTTATCCAGCTAATTTACTatcgttttgtttttgtgacgTAGCTAACTCTCCGGAGACATGGACACCACACTGTTTCAGCTGAGGTCGTTTGTTCATCAGCGGCTGTACATAGCGGCAGAGGAGATCCTCGGAGAGGTGGAGAAAActataacgttagctttgtacgAAGCCGAAGTTAGTCAAACTAAACAGGAGGTTGGAAGTCTGCGACATCAGCTAACGAAAGACCTTCGAAAGAAATCAGCTGCAGAGCCTCCAATGACCAACAGCACAGTGGAACGGGGAGATGAATGTGATGCCCCGCTGCTGCAGGAGAACACTGGTCCCTCAACACCAGAAAAGTCCAACTTCAGTCTTGGTGCTGAGGTGCCGGGACCCTCTCAAATCAGTGCAGATCCGGACAATAATAACTGGAACTACTGCTTGGTTCAGACAGACTTCAAGATGTTAGAgataaaagaagaacaggaggaACTTGGGGATGACAGTCAAACACAAGAGATGGTTTTTCCTTCTCCCGAAATTGTGAAAAGCGAGCAAGATCAGCCAGAGACAGAACTATCATATGAATTGCAGCCAGTTTCTTCAGACTGCTCTGCAGCTCAGAGTGAGAACAATGACAGTGATGAGGAGTTGGTTACCAGCAAAGAAGAACAGACCATAACAatgaaaaggaaaggaaagatgTTGCATGGACAAAGTGGCAACGTTAATGAGAAGGCAGCATTGCCTCATGACAAAAGTTCTGCTAAAAGTGAAAAGGAACGCggtttttgccatttttgtgGGAAGGGATTTCAGTACATTGGCTCTTTGATGAAGCACATAAAAACGCATGAGAACAATTTTGATTGCACGGTTTGTGCGATGACATGCCAGTCAACAGAGCAGCTGATAACTCATCTGAAAAGTTTTcataacaaaacacatttttgtgacGTTTGTGGCAAGACTTTTGCCAATATCCGTCGTCTCCGGCTGCatgaaaaaatacacacaggcaTAAAAGAGTTTGTCTGTCAAGAATGTGGTAAGACATTTTACCGAAAAGAACATCTGATTGTGCATGTGAGAACCCATTCTGGGGAGAAACCTTATCACTGTGATATTTGTGGAAAATCATTCAGTCAGAGCCAGAACCTTACAATTCATAAAAGAAGTCATTCAGGGGAGAGACCGTATCAATGTGGCCTGTGTGGCAAACTTTTTAATACTAGCAGTCATCTCAAAACACACATGAGATACCATTCAGGAGAAAAGCCGTATTCATGTGATATTTGTGGTAAACATTTTCGCCAAAGCGGACAGATGACTAGACATAGGACCACACATACAGGAGAAAGGCCATATGGCTGCCATGTGTGTGGTATGAGATACAGGTTTGCACCTAATCTGAAGGTGCACCTTCAAATTCATGAAAAGGCAGCCTCTGAGTGAAAAAAGTTACATAACCAGACGGCCATCTCAGAGCTCAATGACAAATCATATGTATCGGTAAGTTGGATTTAGAGAGAGTAATTGAAAGAGCTACTTTACttatcagaaaaaaacacaatttaaattagggctggacccgaatattcgttcggtgggttggtattcgatttgaaaatttgacattcgaatatttgttttttttttgcacaacctGGCATCCCCCTCCAAACGGTTCTCATTCGCGCTTGAATATGTTCGAAATATAATACTctcttttacaattttcttaTATAGCCTAGCCATTTTAATAGGATGGACAACCCAACCTCATTatacttaataaatatatttgcttCTTCTTGGACTACTAAAGTGTTCCTGCAACGGGAGTATTCTCTGGCTAGAGCGCAGAACAGCGCAGTTTGCATGGACAGAAGTGCATGCCTGAGTTTGTATTTTGGCTTAAGCTGCGTTGCTTTGACattgtggaaaataaaataatagaaacaaaatgtattatcctTTTTAACCCGTTATCAATCTAAATTAATCTACTGCGAAATATAGGAGACTTTGAGATTTTACTGGGACGTCACGTCACATGCCCCAGTTAAAACGGCCATGAGTTGAACGTCATTACTGTCACGATTCAgcgaaaagaagacaaaaatgcCGAAGACTTCATCTGTGTGGGAGAACTTTAAATTAAGTTAGGACAAGACAAAGGCAAAGTGTCAAATATGCAAATCAAAAAACTTTGACCAGACCAGACTGCAGAGCAGCATCTCTGGAGCTGTGCTTTTTTCACAGttaatgtctgtttttttgtatgCTGTTTTGTGTAATTTGTTTTAATGGTAAAACCAAATTTCCACAtggggggacaataaagtttattaaACTAC
>XM_039825117.1
TTGGACGATGCAAACCGGAAGTCATGTTGTGGCAGCTAGCGAATAGGTCTCCGttagattagctagctagcagttgAGTTTATCTTCTTGTTATCCAGCTAATTTACTatcgttttgtttttgtgacgTAGCTAACTCTCCGGAGACATGGACACCACACTGTTTCAGCTGAGGTCGTTTGTTCATCAGCGGCTGTACATAGCGGCAGAGGAGATCCTCGGAGAGGTGGAGAAAActataacgttagctttgtacgAAGCCGAAGTTAGTCAAACTAAACAGGAGGTTGGAAGTCTGCGACATCAGCTAACGAAAGACCTTCGAAAGAAATCAGAGCCTCCAATGACCAACAGCACAGTGGAACGGGGAGATGAATGTGATGCCCCGCTGCTGCAGGAGAACACTGGTCCCTCAACACCAGAAAAGTCCAACTTCAGTCTTGGTGCTGAGGTGCCGGGACCCTCTCAAATCAGTGCAGATCCGGACAATAATAACTGGAACTACTGCTTGGTTCAGACAGACTTCAAGATGTTAGAgataaaagaagaacaggaggaACTTGGGGATGACAGTCAAACACAAGAGATGGTTTTTCCTTCTCCCGAAATTGTGAAAAGCGAGCAAGATCAGCCAGAGACAGAACTATCATATGAATTGCAGCCAGTTTCTTCAGACTGCTCTGCAGCTCAGAGTGAGAACAATGACAGTGATGAGGAGTTGGTTACCAGCAAAGAAGAACAGACCATAACAatgaaaaggaaaggaaagatgTTGCATGGACAAAGTGGCAACGTTAATGAGAAGGCAGCATTGCCTCATGACAAAAGTTCTGCTAAAAGTGAAAAGGAACGCggtttttgccatttttgtgGGAAGGGATTTCAGTACATTGGCTCTTTGATGAAGCACATAAAAACGCATGAGAACAATTTTGATTGCACGGTTTGTGCGATGACATGCCAGTCAACAGAGCAGCTGATAACTCATCTGAAAAGTTTTcataacaaaacacatttttgtgacGTTTGTGGCAAGACTTTTGCCAATATCCGTCGTCTCCGGCTGCatgaaaaaatacacacaggcaTAAAAGAGTTTGTCTGTCAAGAATGTGGTAAGACATTTTACCGAAAAGAACATCTGATTGTGCATGTGAGAACCCATTCTGGGGAGAAACCTTATCACTGTGATATTTGTGGAAAATCATTCAGTCAGAGCCAGAACCTTACAATTCATAAAAGAAGTCATTCAGGGGAGAGACCGTATCAATGTGGCCTGTGTGGCAAACTTTTTAATACTAGCAGTCATCTCAAAACACACATGAGATACCATTCAGGAGAAAAGCCGTATTCATGTGATATTTGTGGTAAACATTTTCGCCAAAGCGGACAGATGACTAGACATAGGACCACACATACAGGAGAAAGGCCATATGGCTGCCATGTGTGTGGTATGAGATACAGGTTTGCACCTAATCTGAAGGTGCACCTTCAAATTCATGAAAAGGCAGCCTCTGAGTGAAAAAAGTTACATAACCAGACGGCCATCTCAGAGCTCAATGACAAATCATATGTATCGGTAAGTTGGATTTAGAGAGAGTAATTGAAAGAGCTACTTTACttatcagaaaaaaacacaatttaaattagggctggacccgaatattcgttcggtgggttggtattcgatttgaaaatttgacattcgaatatttgttttttttttgcacaacctGGCATCCCCCTCCAAACGGTTCTCATTCGCGCTTGAATATGTTCGAAATATAATACTctcttttacaattttcttaTATAGCCTAGCCATTTTAATAGGATGGACAACCCAACCTCATTatacttaataaatatatttgcttCTTCTTGGACTACTAAAGTGTTCCTGCAACGGGAGTATTCTCTGGCTAGAGCGCAGAACAGCGCAGTTTGCATGGACAGAAGTGCATGCCTGAGTTTGTATTTTGGCTTAAGCTGCGTTGCTTTGACattgtggaaaataaaataatagaaacaaaatgtattatcctTTTTAACCCGTTATCAATCTAAATTAATCTACTGCGAAATATAGGAGACTTTGAGATTTTACTGGGACGTCACGTCACATGCCCCAGTTAAAACGGCCATGAGTTGAACGTCATTACTGTCACGATTCAgcgaaaagaagacaaaaatgcCGAAGACTTCATCTGTGTGGGAGAACTTTAAATTAAGTTAGGACAAGACAAAGGCAAAGTGTCAAATATGCAAATCAAAAAACTTTGACCAGACCAGACTGCAGAGCAGCATCTCTGGAGCTGTGCTTTTTTCACAGttaatgtctgtttttttgtatgCTGTTTTGTGTAATTTGTTTTAATGGTAAAACCAAATTTCCACAtggggggacaataaagtttattaaACTAC
>XM_039825118.1
AAACTTAACAATTTACGCAGTTTTTGCTAAACACCTAACTTGAATATTGAATTAATTTTGGACCAAAAAGTATTAAACGTATAGATAAGTTCACCGTCCTACTTTTTGTATCTCACTTTAGAATTTACGCTTTTATTTTGGACGATGCAAACCGGAAGTCATGTTGTGGCAGCTAGCGAATAGGTCTCCGttagattagctagctagcagttgAGTTTATCTTCTTGTTATCCAGCTAATTTACTatcgttttgtttttgtgacgTAGCTAACTCTCCGGAGACATGGACACCACACTGTTTCAGCTGAGGTCGTTTGTTCATCAGCGGCTGTACATAGCGGCAGAGGAGATCCTCGGAGAGGTGGAGAAAActataacgttagctttgtacgAAGCCGAAGTTAGTCAAACTAAACAGGAGGTTGGAAGTCTGCGACATCAGCTAACGAAAGACCTTCGAAAGAAATCAGGATGTCGAAGACATATTTCTACTACTGCTGCAGCAAGCTGCAGAGCCTCCAATGACCAACAGCACAGTGGAACGGGGAGATGAATGTGATGCCCCGCTGCTGCAGGAGAACACTGGTCCCTCAACACCAGAAAAGTCCAACTTCAGTCTTGGTGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825116.1 True 2429 mRNA 0.41 2 12080475 12083564
XM_039825117.1 False 2426 mRNA 0.41 2 12080475 12083567
XM_039825118.1 False 629 mRNA 0.43 3 12082452 12083704

Neighbor

gene id symbol gene type direction distance location
LOC120573975 LOC104957814,LOC103361744 coding downstream 4658 12062780 ~ 12075817 (-)
ndufb10 ndufb10 coding downstream 22674 12055838 ~ 12057801 (-)
tbl3 tbl3 coding downstream 31205 12028027 ~ 12049270 (-)
LOC120574261 tom1l2,LOC104918838,LOC103361751,LOC100706850,LOC102776585 coding downstream 71939 11984719 ~ 12008536 (-)
srebf1 srebf1 coding downstream 97105 11971044 ~ 11983370 (-)
fahd1 fahd1 coding upstream 43763 12127467 ~ 12128598 (-)
narfl narfl coding upstream 54364 12138068 ~ 12142317 (-)
arhgap17b LOC103361731,LOC100693200,LOC102795553,LOC101468818 coding upstream 102393 12186097 ~ 12213659 (-)
LOC120573971 LOC104964789,LOC103361754 coding upstream 137465 12221169 ~ 12226568 (-)
cbx4 cbx4,LOC102794988,LOC102309824,LOC102204981,LOC101467610 coding upstream 145413 12229117 ~ 12244745 (-)
G154248 rps2 non-coding downstream 25271 12052806 ~ 12055204 (-)
G154246 NA non-coding downstream 57971 12022297 ~ 12022504 (-)
G154245 NA non-coding downstream 58285 12021527 ~ 12022190 (-)
G154231 NA non-coding downstream 67995 11969405 ~ 12012480 (-)
G154187 NA non-coding downstream 250292 11829944 ~ 11830183 (-)
G154275 NA non-coding upstream 47682 12131386 ~ 12155812 (-)
G154305 slc5a11,LOC102796461 non-coding upstream 99907 12183611 ~ 12183825 (-)
LOC120574757 NA non-coding upstream 277535 12361239 ~ 12373994 (-)
G154368 NA non-coding upstream 316548 12400252 ~ 12401475 (-)
LOC120574719 NA non-coding upstream 483474 12567178 ~ 12567810 (-)
G154033 NA other downstream 854929 11203450 ~ 11225546 (-)
tnrc6c1 LOC103361861 other downstream 942947 11098316 ~ 11137528 (-)
LOC120574486 NA other downstream 999868 11078545 ~ 11080607 (-)
LOC120574455 NA other downstream 1288910 10784112 ~ 10791565 (-)
gtpbp1 gtpbp1,LOC104924447,LOC102799794 other downstream 1690299 10352158 ~ 10390176 (-)
LOC120574419 NA other upstream 2281 12085985 ~ 12090981 (-)
cep112 NA other upstream 343800 12427504 ~ 12565471 (-)
LOC120575506 LOC100697827 other upstream 651740 12735444 ~ 12737483 (-)
iqck NA other upstream 871270 12954974 ~ 12972829 (-)
sun1 sun1,LOC104947709,LOC102193096,LOC103360714 other upstream 889556 12973260 ~ 13012781 (-)

Expression


Co-expression Network