tmem86b (LOC103374980)


Basic Information

Item Value
gene id tmem86b
gene name LOC103374980
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 8861162 ~ 8862826 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825141.1
GAGTGCAATCAGAAGGCGAGGATCAGTCCAAAGTTCATTTGCTGTGAAATACCACcggacagagacacagcagaGATTTGAGACAGGGGAACAGGACAAGAACATCTGAGGATTGTGTGTTagtaacaaagacagaaaaggcAAAGACAGGATATAAAATACAAGGTGCGTAAAAGGATCCAATTGGGACATCTGCTTGAGCCCACGGCAGTGCTGATTCTGAGACGATGGACATCCTTGAGACAGCTGCCTATGACAGGCGGCAGAGGAGAAACATGTCCTGTgctctccttttttctctctcgccTTTCTTTTTATCCACAGCTGTGTACTTCTACCTGTGGACTCCTGGCTCACCCGCTTCCATCATGTCTGCGGGTGTCAAATCAGCACCAATACTCCTATTGGCTGCAGCAGTGCTGAGCTGGAATGGAGGGCAGAGTGTCCTGGGTGTGGTGGGAGGACTGCTCTTCTCTGCTGTTGGTGACTGCTGTCTGGTATGGCCTGAGCTTTTTCTGCATGGAATGGGTGCATTTGCTGTGGCTCATTTGCTGTACtcactctccttcctctccagtCGTTATGTGGCAtattcctcttcctcttcctcctggaTCCGTTTTCTATATCTGATCCTGTTCATGGTGGGAGGAGGTGTCTACATTTACATATATCCATCCCTGCAGAAGGCACCAAACTCAGACATAATGCTTCCAGCTGTGGGGGTCTACATTGTTTTAATTTCTCTAATGGGGGCATTAGCCATCAGAACCCGCCATGCGCCAACAATGTTAGGAAGTTTGTCCTTCATGGTGTCTGACCTGTCACTGGCTCTGCAGGTTTTCAAGGTGACAGATCCAATTGAGCATGGTAATGCTATTGTCATGGTGACATATTATTTGGCACAGCTACTAATTGCTGTGGGCGATGTAAAGGCAGTGGAGAAGGAGGACTCTGCAAAATGGAAGAGGTCCTAATCAGCATCCCTGTGGATGAGTCTGAAGTATCTCCATCACCCTAGT

Function

NR:

description
PREDICTED: lysoplasmalogenase-like protein TMEM86A

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825141.1 True 1022 mRNA 0.48 3 8861162 8862826

Neighbor

gene id symbol gene type direction distance location
tmem11 tmem11 coding downstream 50812 8807234 ~ 8810350 (-)
dhrs7b dhrs7b coding downstream 55310 8799475 ~ 8805852 (-)
jpt2 hn1l coding downstream 82400 8772864 ~ 8778762 (-)
mapk8ip3 mapk8ip3 coding downstream 92462 8739631 ~ 8768700 (-)
nudt9 nudt9 coding downstream 195508 8660302 ~ 8665654 (-)
gys1 gys1 coding upstream 3760 8866586 ~ 8881153 (-)
LOC120573900 NA coding upstream 47121 8909947 ~ 8914504 (-)
slc17a7a LOC104930346,LOC103374936,LOC102793338,LOC101484681,LOC100693903 coding upstream 61775 8924601 ~ 8942317 (-)
slc6a16a LOC103374926,LOC104930347,LOC104945282 coding upstream 80233 8943059 ~ 8955286 (-)
nme4 LOC104945280,LOC106931198,LOC106951632,LOC108242919,LOC100703020 coding upstream 107056 8969882 ~ 8973648 (-)
G153137 NA non-coding downstream 84896 8700109 ~ 8776266 (-)
G153139 NA non-coding downstream 176409 8659611 ~ 8684753 (-)
G153143 NA non-coding downstream 213871 8647083 ~ 8647291 (-)
G153142 NA non-coding downstream 216137 8644784 ~ 8645025 (-)
G153130 atp2a1 non-coding downstream 245050 8612277 ~ 8616112 (-)
G153274 NA non-coding upstream 198470 9061296 ~ 9111224 (-)
G153275 NA non-coding upstream 202170 9064996 ~ 9085687 (-)
G153455 NA non-coding upstream 333932 9196758 ~ 9203859 (-)
G153456 NA non-coding upstream 336832 9199658 ~ 9501467 (-)
G153462 NA non-coding upstream 356773 9219599 ~ 9219903 (-)
tufm tufm,LOC106606342,LOC101070424,LOC106606341,LOC106931188,LOC103145412 other downstream 3591 8850443 ~ 8857571 (-)
natd1 natd1 other downstream 44857 8812330 ~ 8816305 (-)
G153172 mrps34,LOC102799846 other downstream 128143 8731397 ~ 8733019 (-)
G152952 NA other downstream 416781 8441179 ~ 8444381 (-)
LOC120574885 LOC103375378,LOC104925605,LOC104966930 other downstream 760764 8082138 ~ 8100398 (-)
zgc:55558 p-ras,LOC105029053,LOC104950842,LOC104930345,LOC103392975,LOC101069736,LOC106606379,LOC103023536,LOC108413997 other upstream 32956 8895782 ~ 8907662 (-)
LOC120574599 NA other upstream 324424 9187250 ~ 9204006 (-)
LOC120574343 NA other upstream 326558 9189384 ~ 9190066 (-)
LOC120574654 NA other upstream 329160 9191986 ~ 9192402 (-)
LOC120574662 NA other upstream 354243 9217069 ~ 9224455 (-)

Expression


Co-expression Network