slc35b1 (slc35b1)


Basic Information

Item Value
gene id slc35b1
gene name slc35b1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 21465792 ~ 21472250 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825168.1
CCCATGGACGCTACCatatcttttatatatgtcaatgtacCATAGATGGACGTTACCGCTTTTTTCTCTACTAATTATAGTCTTTAATTTCTAAATGAAAACACGAACTGCACTCGCCTGACAGGACATCTAACTTACAGAAACCCAGGTGGGAATGGGATGTTTTTGAATTTACAGCTGTCCTGGAGGAGAAATTTAGATACATCAGAAtgacacaaaacaaaccaatGAAATGATATTTGAGTGTCTGTGCAGCTCCAGACAATTCaaggtaacgttaccgttagcgAGCTTTGGCAATTAACAATTACTGTGCACAAGAAGGTTTGAAGGCAAAACCGCTACTACCACAGAAACACCTAGCTAACGTGAAAACACGAGCACCATATACCGGCTCGCCTCATCGTGGAGCGGGACGTCGGTGTGAGGGGCGCGGGGAGCGGAGCGGTGTCGGTTAACATACCCGGGCTGTTGGACGATAGCATGGCTGCGGGAAAGGGAGCTGGGAAGCCTGCCTCAATGTGGGACAACATGCGGATACGGTTCATCGTTTGCTTCCTCGGAGTCTTCGTGTGTTACTTTTACTACGGAATATTACAAGAGACCATCACACGAGGTGATTATGGACAGGGAGACCAACAGGAGAAGTTCAGATTTGCCCGGACATTGGTCCTTATCCAGTGCATTGTCAGTGCTCTGTTTGCTAAGATCTTGATCCAGTTTTTTGAGGGCTCCAAGCCAGATCACACCAAGAGCTGGCTCTATGGGTTGTGTTCCCTCTCTTATCTTGGAGCCATGGTGTCCAGTAACTCTGCCCTTCAGTATGTCAACTACCCCACACAGGTGTTGGGGAAATCCTGCAAGCCCATACCAGTGATGATCCTCGGTGTGACAATACTAAGGAAGAAGTACCCACTGGCAaagtatctgtgtgtgctgcTTATTGTGAGCGGTGTAGCGCTGTTCCTCTACAAGCCCAACAAGAGCTCAGCCGTTTCAGATGACCATGTTTTTGGGTTTGGAGAGATTCTGTTGCTGATCTCTCTGACTTTGGACGGTCTGACTGGTGTGGCCCAGGACCACATGAGGGCTCGCTTCCAGACAAGTGCCAACCACATGATGCTGAACATCAACATGTGGTCCACTCTGGTGCTGGGACTAGCGGTATTGTGGACAGGGGAGGTATGGGAGTTCCTAAGTTTTACTGAACGCCACCCGAGCATCATCTACAACATTCTTCTGTTTGGACTGACCAGTGCTTTAGGCCAGACCTTCATCTTCATGACGGTGGTGTATTTTGGCCCTCTGACCTGCTCCATCGTCACCACCACAAGGAAGTTCTTCACCATCCTTGGCTCCGTTATTCTGTTTGGCAACGTCATGAGTACGATGCAGTGGCTTGGCACCATCCTGGTGTTCCTTGGTCTCGGATTTGATGCTAAATTTGGCAAAGTACCTAAGAAGACGACGCACTAAAACATCTGGAGCACACGAGAGAAAGACCGAAACATTGCAAAAGGAAACACTCTATAgccagtattttattttcataagaCGTTCTGCACAGGCATACTGTATGTGCCTATGATTTGTTTAAGTATGGTCAGATTTTTAACTTAACTGTATTTAAAAGATAGTCCAGCTTCTGTTGTGTACTGTTGATATATCGAAGAGACACGTTTTACTTGGGATCAAGTCCTGAATGAACTTTGACCACAAGATACCACACTTTTGTGGGGGAATTTGGACTGGCTGAAAGACACAGGTGGAAAATACTGTATTTAGACAAATCTTATGTTTCTGAAACCAGCTCACCTCCCTTGGGTGGAAATTAAAACCAAACAAGGCATAAGGTATATGTTTTCCATCATTTAACTCATGAACTTGCCACCCAGTAAGGCTTGGTTTACAAATTGTTGCTTGAATATGTGTAATTATCACATGTAGTTTATTTCTTGGCAAACAATCAGCCAAGCATCATGCCATTTATAAAATATTAACTGTTGTATGTAGCctgttgtgttttgttcaaTCTTACTATTGAactgtttttacttttattttctacaAGTTGAAAATGACTTGCCATAAAAAGAGAAATTGTGATATTTCATGGTGATTTACTTATTATTAAACAGACTGAACTTGATTGGTTCACATCAGTCAGTTGAGATACTCTAA

Function

symbol description
slc35b1 Predicted to enable UDP-galactose transmembrane transporter activity and UDP-glucose transmembrane transporter activity. Predicted to be involved in UDP-galactose transmembrane transport. Predicted to act upstream of or within carbohydrate transport and transmembrane transport. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be integral component of membrane. Predicted to be integral component of Golgi membrane and integral component of endoplasmic reticulum membrane. Is expressed in hatching gland; notochord; and polster. Orthologous to human SLC35B1 (solute carrier family 35 member B1).

NR:

description
PREDICTED: solute carrier family 35 member B1

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K15275 SLC35B1; solute carrier family 35 (UDP-galactose transporter), member B1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825168.1 True 2181 mRNA 0.44 9 21465792 21472250

Neighbor

gene id symbol gene type direction distance location
slc4a1a slc4a1 coding downstream 365825 21086540 ~ 21099967 (-)
ubtf ubtf coding downstream 380577 21074583 ~ 21085215 (-)
hrob NA coding downstream 415185 21038105 ~ 21050607 (-)
asic2 asic2,LOC102794937 coding downstream 433913 20617463 ~ 21031879 (-)
kcnj19a LOC106527510,LOC107084768,LOC101480582,LOC102209712,LOC104946854,LOC100707605,LOC103469386 coding downstream 968798 20481499 ~ 20496994 (-)
fam117aa fam117a,LOC102291926,LOC102800024,LOC103357381 coding upstream 915 21473165 ~ 21481722 (-)
rundc3aa LOC103357380,LOC101465462,LOC104930217,LOC100703962,LOC102776052,LOC102192765 coding upstream 10695 21482945 ~ 21498768 (-)
strada strada coding upstream 28949 21501199 ~ 21513401 (-)
trnac-gca_31 NA coding upstream 132115 21604365 ~ 21604436 (-)
dcaf7 dcaf7,LOC100702343,LOC105030232,LOC105898766 coding upstream 138426 21610676 ~ 21615103 (-)
G156985 NA non-coding downstream 3112 21461520 ~ 21462680 (-)
G156934 NA non-coding downstream 139391 21326114 ~ 21326401 (-)
G156932 NA non-coding downstream 141297 21324237 ~ 21324495 (-)
LOC120575152 NA non-coding downstream 212228 21170204 ~ 21253564 (-)
G156825 NA non-coding downstream 392507 21071874 ~ 21073285 (-)
G157065 NA non-coding upstream 162539 21634789 ~ 21635593 (-)
G157075 hsd3b7 non-coding upstream 193200 21665450 ~ 21667398 (-)
G157081 cd2bp2 non-coding upstream 222681 21694931 ~ 21698789 (-)
G157092 NA non-coding upstream 254945 21727195 ~ 21729411 (-)
G157135 NA non-coding upstream 349372 21821622 ~ 21831111 (-)
ndufa4a LOC101066870,LOC103357383,LOC101155111,LOC107378524 other downstream 715 21463207 ~ 21465077 (-)
LOC120575154 spop,LOC102792310 other downstream 73045 21333409 ~ 21392747 (-)
selenow2a LOC102798572 other downstream 356999 21105860 ~ 21108793 (-)
atxn7l3a atxn7l3 other downstream 394285 21064760 ~ 21071507 (-)
hexim1 LOC104946860 other downstream 1164846 20299024 ~ 20300946 (-)
G157034 NA other upstream 148780 21621030 ~ 21622961 (-)
LOC120574354 NA other upstream 242764 21715014 ~ 21718729 (-)
G157096 LOC102782282,LOC100692966,LOC103367351,LOC107084765,LOC104927186,LOC102201015 other upstream 262132 21734382 ~ 21740703 (-)
LOC120575106 LOC103367329,LOC107658449,LOC107564019,LOC107674165,LOC104934486 other upstream 282491 21754741 ~ 21756191 (-)
G157147 cdhr2 other upstream 376845 21849095 ~ 21856016 (-)

Expression


Co-expression Network