nudt9 (nudt9)


Basic Information

Item Value
gene id nudt9
gene name nudt9
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 8660302 ~ 8665654 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825208.1
CATGGGCGGTGCACTTCCTGGTTACTTTGGTGCTGCATGTTGTGGTTGTTACTATTGATGTCTCAAGGAATGGTACATTTCCTCCTGCGGCGACACTGGATCGGCCAGATTCGTCTAGCGCTTACTCTTTTCGGACTCCCATGCACCGTCTGCACCCCTGGAGTTAGGTCTGCAATCTCCTGCTTATCTTCTCACCCTTTCAGGACCAGTCAAACCACCAGACCCATCAGTACCAGTTTCTGTAACCTTTACACGACTAGTGTCCAGACAATGCCATCTTCATCAGCGCCTCATGTCAAGTCTAGATGCCTCGAGTACCCAGGGTCCAAAATCCAGCGCTTCCTCGTGCCTGATGACAAGGTGGACTGGAGTCAGAACTGGCCACAGTATAATCCAGTCAGCTACACCGACCCTTCAGTTTTAAATAAGCCAGCGTGGGCGGATCCTGATATTGGCTCTTTCTCTCCAAAGTTCAACACTGTGGATGGTGCTGTGGATAGGACAAGCTTTGACGGCAGCTACAAAATAGAAGATGGAAAGCCACTAAATCCTCATGGACGCACAGGGGTGACTGGTAGAGGTTTGCTGGGACGATGGGGACCCAATCACGCAGCAGATCCCATTGTCACCAGATGGAAAGTAGATGCCACAGGAGAAAAGATATATCACTCAGTCTCCAAGCTGCCGATCCTGCAGTTTGTGTCCATCAAGAGGAAAGACTGCGGGGAGTGGGCCATTCCCGGGGGGATGGTAGATCCAGGGGAGCAGGTCTCTCTCACGCTGCAGCGGGAGTTCTCCGAAGAAGCCTTGAACACGCTGGCCATTCCGCCATCGGAAAGAGCAAAAATCAGTGAACGCATCAATAAGCTCTTCAAATCGACAGGGTTTCAGGTCTATAAAGGCTATGTGGATGATCCTAGAAACACTGACAATGCTTGGATGGAGACGGTGGCTGTCAACTTTCATGATGACTCAGGCAACAGCGTGAGCGAGCTGCCGCTCCAAGCTGGCGATGACGCAGGACAAGTCCAGTGGGTTGACGTTGACTCGTCCTTCCTTTTCTATGCGAGTCATTCCCATTTCCTGGAGCTGGTTTCCAAAGAGAGAAAAGCTCACTGGTAACCAAGGGCGACCGACTCTACTTGGACATGACGATGAAGGAAACATTAAGAGCCTTGTTGCTCTCTGTGTGCTAAGGATGCATGACACTAATCTAAATTTAAACTAATTTAAACATAGTTATTGTAGTTTTAATACTGAAAACCTAATATGCCCCCATTATATATATGCCCATTATACAATGTACAGCAACATTGTGACTGCGCTTTTGGATTAATATAGCAGAATGTATGAATTGAATGAAAATAGCAGGTTGAAAGCTTTGCTATGGCCTGCTCAGAGGAAATGGCTCAGTGTATGTTAGAGCTGCTGTTCAACTTTTGtcacagaaaagaagaggaaaaaaaagaggaaatttacattttcattaaaaaaaatatttcgaCTCACCGCTCGGAAGAAGCTCAACATGAGACTGTTAAATGCAAGATGCTGCTGACACACCACATTATTTCTATTGGCACTAATTATGCAAATGTATTCAACATTAACAAGGATCACATTAACCCAGCGTGATCATGTAAGAACAACACACAATGAGCTGCTGAACATAACATATGCTACATTAATTTAAGTGTGATAAGGGGGgcaatcaaaattaaaaagtgTAGACTGACTTTGATctttggatgtgaaaagaataTAAAGATGTGCTGGAGCTCCCCACACAGCCCAGCAGTGCACTGAAGCTGAGCACAGACGGGCCAAAGCTATAGGGACAAACATGTTTTCAAGCGGTAACTGTCAGTGGAAGCAAAAAGGCCCAGAGGCTGTGGCTCGGAGGTAGAGTGGTTGCCCCTCAACCGCGAGGTTGGCGGATCATTCCCAGGCTCCTctggccacatgtcaaagtgtccctgagcaagacactgaaccccaagctGCTCCCCGGATGCTGTATgtatagctgtccactgctcctaatactgGGATAAATGCAGTAATAGAATTTTGCTACTTGTATGTGACGATTAAGAATAAAGTTTGATCCTTGATCCTTCACACTCAACAGCCTGCCTTTTCCGAAACGCTCTCATCAGTATGTGTCATCTCACTGCTGGGATGGAGAATTACACATGAAATGGCGTGTATCCGTTCATGATACAAACAGTAACACATGGACACTTCTGTCATCAAAAGGCAGCCAACCACATCTTTGCAACAAACATGTTTgtctttaattacatttatttaaatgtgataTGAATATTCTGTGTGAAACTAGTGAGGACGCCAGCTAAGCACTTGTGGGAAAGGGATGTGGCTTACACAATAACTTTGTTAAATTAGGTCCACGCAGGTCTAGGAGGTGCCACAAATCCTACAGTATAAGCCCTTTTTATTTGTTCTCATCTCTGCGCAAGCCGCAACGTTTGCCTGCATGACATGATATCCACTTGTATTAAGGTACGATACCAGTAGCTACGTGTGGGGAGATTCTGCTGTTCAAATCTCACTAAAAGCATAACCATAAATATGTTTACACCTATGCAGATGCACTTTCAGCTGCGTACACCCAGGCCACTTACCAGCTCCACGGAAGCATTTACAGCCGAAGCACTATTAGCATTTGCTGTTGCAGGAAGGGAGAGTATTTCCCATCCAGATTTCCCCAGTTGTTATTCAAATTGGCCAGTCATAAAATCCTCTTAACCTTTGCCTACAAAAGTttggattgatttttttttttctgcctgaaGTGATTTTGGCATTTGGTTAGTACAagacaaaaatgtataaatggtGGGGTGAGTGATCAAATGATATACATTTTGATTAGTTTCATTATTATGACCGATGTTATACACAAGGCTTTGCTGATTGGATTGTATATGCTATCATGTAAAAATGTATCCCGGGGTGTCTACTTACTAAACTTGCACTGAAGATGTCTGACAGCAAAATGTCTGATCTTgtcttttttgttattcatttgAATCACTTGAAACTGTAAATCAGTAGGAATTCTCGAGTTGATTTGTGCATTTTTCCTCATAAAGTAAATGTGTATCTTAAAAGTGATAattatatgtactgtatttgtagCTGTCTTTATGTCTCAGCATGTGGTGGCATCAGGAACACTAATCAAATGTGTATGCAAATCTTGAGAACTTATGCACTATGAAGTGCTACAACCCCataaaatgcattatttgttttttttatctacaTCATGTCTGATGTGTTTTCTTTCCCATTGTGAATAGGCAAATAAAAAGTATGGAAAAATAA

Function

symbol description
nudt9 Predicted to enable ADP-ribose diphosphatase activity. Involved in regulation of cyclic nucleotide-gated ion channel activity. Is expressed in several structures, including Kupffer's vesicle; axial chorda mesoderm; axis; nervous system; and trigeminal placode. Orthologous to human NUDT9 (nudix hydrolase 9).

NR:

description
ADP-ribose pyrophosphatase, mitochondrial

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K13988 NUDT9; ADP-ribose pyrophosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825208.1 True 3354 mRNA 0.43 8 8660302 8665654

Neighbor

gene id symbol gene type direction distance location
si:ch211-11k18.4 LOC101474882,LOC102302894 coding downstream 1083 8651632 ~ 8659219 (-)
rabep2 rabep2 coding downstream 19867 8627083 ~ 8640435 (-)
LOC120573875 LOC104929518,LOC103375462,LOC108242957 coding downstream 139715 8513629 ~ 8520587 (-)
LOC120575363 LOC103375241,LOC104929519,LOC102212394,LOC101477022,LOC102794201,LOC102305637 coding downstream 148462 8506317 ~ 8511840 (-)
recql5 recql5,LOC102306769 coding downstream 155463 8488379 ~ 8504839 (-)
mapk8ip3 mapk8ip3 coding upstream 73977 8739631 ~ 8768700 (-)
jpt2 hn1l coding upstream 107210 8772864 ~ 8778762 (-)
dhrs7b dhrs7b coding upstream 133821 8799475 ~ 8805852 (-)
tmem11 tmem11 coding upstream 141580 8807234 ~ 8810350 (-)
tmem86b LOC103374980 coding upstream 195508 8861162 ~ 8862826 (-)
G153143 NA non-coding downstream 13011 8647083 ~ 8647291 (-)
G153142 NA non-coding downstream 15277 8644784 ~ 8645025 (-)
G153130 atp2a1 non-coding downstream 44190 8612277 ~ 8616112 (-)
G153127 atp2a1,LOC102238060,LOC106906942,LOC103469116 non-coding downstream 48305 8551296 ~ 8611997 (-)
G153124 NA non-coding downstream 72114 8540378 ~ 8588188 (-)
G153137 NA non-coding upstream 34455 8700109 ~ 8776266 (-)
G153274 NA non-coding upstream 395642 9061296 ~ 9111224 (-)
G153275 NA non-coding upstream 399342 9064996 ~ 9085687 (-)
G153455 NA non-coding upstream 531104 9196758 ~ 9203859 (-)
G153456 NA non-coding upstream 534004 9199658 ~ 9501467 (-)
G152952 NA other downstream 215921 8441179 ~ 8444381 (-)
LOC120574885 LOC103375378,LOC104925605,LOC104966930 other downstream 559904 8082138 ~ 8100398 (-)
grin2aa grin2a,LOC102780805 other downstream 936388 7569718 ~ 7723914 (-)
arhgdig NA other downstream 1858766 6772880 ~ 6801536 (-)
G152567 NA other downstream 1939659 6719784 ~ 6720643 (-)
G153172 mrps34,LOC102799846 other upstream 65743 8731397 ~ 8733019 (-)
natd1 natd1 other upstream 146676 8812330 ~ 8816305 (-)
tufm tufm,LOC106606342,LOC101070424,LOC106606341,LOC106931188,LOC103145412 other upstream 184789 8850443 ~ 8857571 (-)
zgc:55558 p-ras,LOC105029053,LOC104950842,LOC104930345,LOC103392975,LOC101069736,LOC106606379,LOC103023536,LOC108413997 other upstream 230128 8895782 ~ 8907662 (-)
LOC120574599 NA other upstream 521596 9187250 ~ 9204006 (-)

Expression


Co-expression Network