mchr1b (LOC103359996,LOC101467517,LOC102311886,LOC100690541,LOC102197681)


Basic Information

Item Value
gene id mchr1b
gene name LOC103359996,LOC101467517,LOC102311886,LOC100690541,LOC102197681
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 3969793 ~ 3972398 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825575.1
GAAAACTGTTATGTaaagttgttattttttattaagacCACCAAAAGCTATCTGGGATGGACTTTGCCTACATTTCAAATTCATCTTTTTCACCCTTCACTTCGCccgagagagaaggagaagAACATGAGCAGTACAACAAAGTGCTCATGCCCAGCATTTTTGGTGTCATCTGTTTCTTTGGGATCTTTGGAAACTGTGTTGTAATCTACACCATCGTGAAGAAAACCAAGTTCTGCTCCCAGCACACAGTGCCGGACATATTTATCTTCAGCTTGTCCGTCGCGGACCTGCTCTTCCTCCTCGGCATGCCTTTCCTCATTCACCAGCTTGTGGGCAACGGCTCCTGGTGCTTTGGTGGCACCATGTGCACTGTCATCACAGCGCTGGACTCAAACAGCCAGATTGTCAGTACTTACATCCTGACAGTAATGACTCTGGATCGCTACCTGGCAACTGTCCATCCCATCCGCTTCAAACATGTTCGAACCCCCTTCGTGGCCAGGGCAGCGGTGGCTCTGGTGTGGCTGTTTTCTGTGGTCTCCATCACTCCAGTGTGGATGTACACGGGACTCATGCATCTGAAGGACGGCTCGGTCGGCTGCGCCCTCCTGCTGCCCAACCCGGCCACGGATACATACTGGTTCACCCTCTACCAGTTCTTCTTGGCCTTTGCTCTGCCTTGGGTGGTCATCTGTGCGGTCTTCTTCAAGATTCTCCAAAACATGTCCGCTACAGTTGCTCCACTGCCCCAGCGCAGCCTCAGGGTGCGGACGAGAAAAGTGACCCGCATGGCCGTGGCTATATGCGTGGCATTCTTCATTTGCTGGGCCCCCTATTACGTCTTGCAGCTGGCCCACCTCGGAGTACAGCGGCCCAGTTTTGCCTTCCTGTACGCCTACAACATTGCTATCAGCATGGGCTACGCCAACAGCTGCATCAACCCGTTTATCTACATTGTACTGAGCGAGACGTTCAAGAGGCAGTTCATTGTAGCCATTCGCCCACCCCACAGGGGTTTCAGAGTTGCCCCTGCTCTGGCTGATGGCAGTATGAGTCTGAGGATGGCACCAGACTGCTCTCAACCATCTCACTCGCAGTCAGCAAGGGAACTACTTCCAAACATGCTTCCTGTCACTGTGCACTGAGATGGACACTTAACCAAATGGCCACCTGCCGCTTCTGACTGCTGGTCTTCTCTTAGCAAACACCTGTCTTTACATGGAGACATAATGGCTGCTTCGCAAGTCTTTTATTTGATATCTCCTTCATTCATTCTGGCCCTCTTgagtgaaggccgtctcaaagatCTTATTCCTGCAGAGAGGAGCGAGGATTGAGGATccaggatggaggagggagctCTGATGAGCTATGGCGGCTGTGTCGCAGGTCTTCAAATTGCATTCACGTTTCCTTCAGTTGCT

Function

NR:

description
melanin-concentrating hormone receptor 1-like

GO: NA

KEGG:

id description
K04320 MCHR1; melanin-concentrating hormone receptor 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825575.1 True 1427 mRNA 0.51 2 3969793 3972398

Neighbor

gene id symbol gene type direction distance location
LOC120575475 NA coding downstream 254566 3691446 ~ 3715227 (-)
pik3r6b NA coding downstream 280394 3669819 ~ 3689399 (-)
mfsd6l NA coding downstream 303338 3661111 ~ 3666455 (-)
zgc:171844 LOC103359992,LOC107094641,LOC100711370,LOC102309406,LOC102193574,LOC101465794 coding downstream 313733 3643493 ~ 3656060 (-)
tom1 tom1 coding downstream 337192 3617009 ~ 3632601 (-)
trnas-aga_11 NA coding upstream 57781 4030179 ~ 4030260 (-)
LOC120573799 aanat1b,LOC104938975,LOC106934060,LOC102233098,LOC106937025,LOC103468403,LOC105929941,LOC107104616 coding upstream 238748 4211146 ~ 4214095 (-)
LOC120574358 LOC102302242,LOC108236130,LOC103143665,LOC107376256,LOC103468406,LOC101471213,LOC105929903 coding upstream 243435 4215833 ~ 4303659 (-)
ddx47 ddx47,LOC102790298 coding upstream 333438 4305836 ~ 4314336 (-)
LOC120574171 wbp11 coding upstream 342396 4314794 ~ 4324641 (-)
G151561 NA non-coding downstream 5382 3964048 ~ 3964411 (-)
G151521 NA non-coding downstream 318526 3609156 ~ 3651267 (-)
G151515 NA non-coding downstream 447003 3522352 ~ 3522790 (-)
G151399 kri1,LOC102780649 non-coding downstream 589128 3375879 ~ 3380665 (-)
G151398 NA non-coding downstream 590255 3379186 ~ 3379538 (-)
G151615 NA non-coding upstream 82816 4055214 ~ 4112189 (-)
G151633 NA non-coding upstream 110520 4082918 ~ 4083681 (-)
G151639 LOC103360002,LOC100712452,LOC105013158,LOC102214151,LOC101470166,LOC106937022,LOC103143670 non-coding upstream 158406 4130804 ~ 4165498 (-)
G151691 NA non-coding upstream 295932 4268330 ~ 4268654 (-)
LOC120574176 NA non-coding upstream 361874 4334272 ~ 4337224 (-)
G151344 smarca4 other downstream 652878 3311727 ~ 3316915 (-)
G151227 LOC103393680 other downstream 1054426 2911326 ~ 2915367 (-)
G151216 LOC106957010,LOC107376217,LOC103393680 other downstream 1073450 2873918 ~ 2896343 (-)
G151146 NA other downstream 1164382 2399809 ~ 2805411 (-)
farsa farsa other downstream 1808069 2132732 ~ 2161724 (-)
LOC120575464 NA other upstream 389450 4361848 ~ 4367343 (-)
LOC120575466 LOC102292836,LOC101471904,LOC100692969,LOC103393382,LOC103468414,LOC102212070,LOC103143659,LOC102784177 other upstream 443779 4416177 ~ 4464991 (-)
LOC120574081 grin2b,fmc1,LOC102794452,LOC102794917 other upstream 612775 4585173 ~ 4765493 (-)
G152043 cdc42ep1,LOC102301584,LOC102206375,LOC102078793 other upstream 1205918 5178316 ~ 5227241 (-)
G152114 rbx1 other upstream 1489448 5461846 ~ 5464418 (-)

Expression


Co-expression Network