sez6l2 (sez6l2)


Basic Information

Item Value
gene id sez6l2
gene name sez6l2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 9020086 ~ 9036828 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825615.1
GGGGAGGTGCGAGTGATGCTGCCTCGTATAGCCCGAACATTTTGTCACACACCAGGCTGGCATTTTCACCGAGGAAACGCCTCAAATAACAACGGAGGTGCTTTGTGTCACATTACCATTAACAGGTTGTTAATAGAATGTGGTTTAGAGGGTTACCGCGGTGAGGGTCATTCAGTTTTATCTAAAGCCATGGGGTTCACACACCTTGCTGTGATGCTTTCTGTCACCATGATCCACCTAGTTTCAGGTTTGACCTTTAGGACTACTGAAACTGATACACTACCAACATCAACCCCAGACTCGTACCCTCTGGGTGACCTAATCCATGCTGCTCTGCAGAGTAAGGACTACTTAGGAGAGGCTTCAGCAAGCACAGGTACTACCACCAACCCGACACAGGCTGTGCCTGGGCTTGGGCAGACCGAGTCGACAGCAACAGTCATATCACCGGGCCTGCTCACCACAGCTTTAAGCTCCTCTTCTGCTGCCAGCCAGACAGGATCAAGGAATACCATGTCCCCGCTGCCCATAGAGGAGGAGACAACCACCACTCTGATCACCACGACCACCATAACCACAATGCACATGCCAGTACAATGCAATGCAACTTTGTCAGCAATGGAGGATGTTGTCGAGTCACCTGATCCTGCGTCATCATCCTCATCTTTTTCCCCTCTGGAATGCACCTACAGTATTACTGTGTATGCAGGTTATGGTGTGGAAATTCAGGTGAGGAAGGTTAACCTTTCTAAGAAGGAGTCTCTGACGATCATGGGCTATGGAGGTTTGGGACCAGAGCTCCTAGCCAACGAGACCCTGATGAGAGAGGGTCAGGTGATTCGCAGTACAACCAATCAGGTGTACATACACTATCGCAGTCTCCGACAGTCCAACCACGGTGTGTTCAGCCTCCACTATCAAGCCTTTCTGCTGTCCTGCCCGTTCCCTCTGTCTCCTGAGGGCGGCGGAGTGACAGTGACAGATATCCATCCTGGAGGTCAGGCCCACTTCCACTGTGATCCAGGTTTCCAGGTTCGCGGCCATGAGGTTGCTACCTGTgtcaacacaacacaaccacactGGAGCACTCCTGAGCCACAATGTGTCGCTGTTTCTTGTGGAGGGTGGATTCGTAATGCAACAGTTGGCCGAATACTGTCTCCACCACCTCCATCTGTCAGCAACCACAGTAATGGAAACAACCTGAGCTGCCACTGGTTAATAGAAGCCAAAGAGGGACACAGACTCCACCTACACTTTGAGAGGATCGCGCTGGATGAAGATGATGATAAGTTAATTGTGCGCGGTGGAAACAGTTCCCTGTCTCCACCACTCTTTGACTCAGACCTGGATGATGTCCCAGAACGTGGGTTGCTGAGTGAGAGCGCCACACTGTACCTGGAGCTCACAGCTGATTCTTCTTCCATCCCTCTGCTTCTGGCACTGCGATACGAGGcTTTCGATGATGAACACTGCTGGGAGCCCTACATGCCCCATGGAAATTTCAGCAGCAGTGACATCACATATCAGCTGGGCACCACTGTTACCTTCACCTGCGCCCCAGGCTTTGTCATGGAGCAAGGTTCGGGCACGATTGAGTGTGTCGACCCCAGCAATCCCCACTGGAATGACAGCGAGCCTGTGTGCAAAGCTCTGTGTGGAGGGGAGTTGACCGAGCCGTCGGGTACCATCCTGTCTCCTGATTGGCCCCAGAGCTACTCCAAGGGGCTGGACTGTGTATGGCAGATCCATGGCAACGAGGAGAAACGCATTGAACTGGATGTCCAAATTCTAAATATCCGCCACACTGATGTGCTGACCGTTTTTGACGGACGTGATCTAATGTCCCATGTGATCGGACAATACCTGGGGTCCAAAGAGCGTTTCCAGGTTGTGTCTGGGGGGTCAGAAGTCACCATTCAGTTTCAGAGCGATCCAGATGATTCCAGTTTCATCCTGAGTCAAGGATTCCTCATTCATTACCGTGAGGTTGAGCCAAACGACACCTGCCCCACTCTCCCTCAAATTGACTTTGGCTGGATCAGCTCGTCCCACTCCTCCCCTGTGAGAGGCAGTGTGCTGACCTATCAGTGCCAACCAGGATATGACATCAGTGGCTCTGACATCATCACCTGCCAATGGGACCTTTCCTGGAGCAGCAGCCCACCTACATGTGTCAAAGTCCAGCAGTGTCCTGACCCAGGAGAGGTGGTAAACGGAGCGCGCTCAGTGCGCCCCGAGGCAGGTTTTGCAGTTGGAACAGTCGTTCGTTTCTCTTGTAACCAGGGTTATCAACTGGAAGGTCCAAGCCAAATCTCCTGCCACGGCCGAGACACTGGCACCCCCAAATGGAGCGACCGCAGCCCAAAGTGTGTCTTAAAATATGACCCGTGCCCAAACCCTGGTGTCCCTGACAATGGTTACCAAACCTTGTACAAGCACAGCTACCAGGCAGGAGAAACTCTGCGTTTCTTCTGTTATGAGGGCTACGAACTCATCGGCGAGGTCATTATCAGCTGTGTTCCCGGCCATCCCTCTCAGTGGAACAGCCCACCGCCCTTTTGCAAAGTGGCATATGAGGAGCTTTTGGATGATCACAAATTAGAAGTGTCCCAGTCATTTGAGCCGTCCCATCAGATCCTGAGTGAGAACATTGCTTTGGCAATAATTCTGCCAATCATCCTGGTCATCCTCCTGATTGGAGGAATTTACATGTACTATACAAACATCTGCAGACTAGAATGGAAGCCGCTCTTCtggaagtctctctctcacacacactcctacagtCCCATTACAGTCGAGTCCGACTTCAACAACCCGCTGTATGAGGCAGGGGATACGCGGGAGTATGAAGTATCCATTTAAAGGAGAGAATGTCTTGGTGAGAATTGAAAACCACCGAATGATTCAATTCTTTTAGAAGATAGATTCCTTTGTATTATAAGGCCTCACTCCCCTTTTAATATTCATTTCTAATTATCTTTCAGTTTTACCATCCCTGTATCTCTGGTTTATGAATTTGTGGAAGTGCTTTACTTTGATTTGTTGCACTGATATGGTGATCTGCCAAACGTGGGTCCTACTTCACGGTCCAACTTTCTGTATCACTTGGACTGGTGCCTTATGATGGGTAAGAAATTGATAACAAAGTAGAAGAAAAAACAGTTTGGGAGGCATAAGAACAGGAGATGTAAAAAAGGGTGAAGGGAAatggatttatttattaagttaaATTATTATGAGGCCAAAACATTAGAGAACTTGGCAATACTTTATTTGTAACTATCAAAAGTTACAGTCATGAGCATACGCATACACACACTggatgtttttctttcattgtgAGTGGCTcatgttacatttttaagtgtAACAGTAAAAGGGAAGAATACTTTACTTTCAATCATGAGAAAAAGTTTGAGATCAACACAGtcattttctctccttctcactgtctttctctctctctgtgtgtgtgtgtaacacaaacacaaattgaaTGTAAATATCTGACTTAATATTGATTGAGGTTGgtatatatattaaattatatatataagcCTAATATATACACTTATACATGGTGGCTGGGGGTTATATATTTTCATTATATATGTAATGAAAATTCTGTGCCAAAATATAATGTTGAATAATTTATTGTCCCTAAGTGTTTCATCTGTTGTTGCAATACTGTTTACAAAAGCAGTTTATTTTATTCTTCGCTGTTTCTGGAGTGCATAGTCACCCAGTGTCATTTAAGTGTCATGACTCATGACATATAAGGAAAAGGTGAGGACATGAATGTCATTATGCTTAAAGCATGCACTGATTGTAAATTATATTGCTTCTGCTCAATcttgccattatcattatagtTATTGACAGTTATCATTGTTATCAGATTTGATGTTGTATGCACTATGTTGATGAAAAATTACAAACTTGGCTGCTTGCTGTGAtgcattatgtatttatttacaacTGATTGTTTGAACAGTGAATGTAGTCTCATTTACTGTGCCAAATGAAGGATCCAGGAGACTGTTGCTTTGTAGACTTAATTCTTCTCTTATCATCAGTAGCATTTCTTTGCTTCATATATGAATACACTCTTTTGAAGGCAGTAAACTGGAAATAAAGTCTCTGTTGAATGGTGTAAAA
>XM_039825617.1
GCCCTCACATCATAGCCGAATGCGTCAACCACACTGTTACCAGCTAGAGGCATCTCACCAGCACAAACCCCGCCGTGTTATCGGGGCCTAAGGCAACAGGATACTGTCCAAGTAGAAGAACACAGGACGCAGCCCGGAAAACAAAGGTCATTCAGTTTTATCTAAAGCCATGGGGTTCACACACCTTGCTGTGATGCTTTCTGTCACCATGATCCACCTAGTTTCAGGTTTGACCTTTAGGACTACTGAAACTGATACACTACCAACATCAACCCCAGACTCGTACCCTCTGGGTGACCTAATCCATGCTGCTCTGCAGAGTAAGGACTACTTAGGAGAGGCTTCAGCAAGCACAGGTACTACCACCAACCCGACACAGGCTGTGCCTGGGCTTGGGCAGACCGAGTCGACAGCAACAGTCATATCACCGGGCCTGCTCACCACAGCTTTAAGCTCCTCTTCTGCTGCCAGCCAGACAGGATCAAGGAATACCATGTCCCCGCTGCCCATAGAGGAGGAGACAACCACCACTCTGATCACCACGACCACCATAACCACAATGCACATGCCAGTACAATGCAATGCAACTTTGTCAGCAATGGAGGATGTTGTCGAGTCACCTGATCCTGCGTCATCATCCTCATCTTTTTCCCCTCTGGAATGCACCTACAGTATTACTGTGTATGCAGGTTATGGTGTGGAAATTCAGGTGAGGAAGGTTAACCTTTCTAAGAAGGAGTCTCTGACGATCATGGGCTATGGAGGTTTGGGACCAGAGCTCCTAGCCAACGAGACCCTGATGAGAGAGGGTCAGGTGATTCGCAGTACAACCAATCAGGTGTACATACACTATCGCAGTCTCCGACAGTCCAACCACGGTGTGTTCAGCCTCCACTATCAAGCCTTTCTGCTGTCCTGCCCGTTCCCTCTGTCTCCTGAGGGCGGCGGAGTGACAGTGACAGATATCCATCCTGGAGGTCAGGCCCACTTCCACTGTGATCCAGGTTTCCAGGTTCGCGGCCATGAGGTTGCTACCTGTgtcaacacaacacaaccacactGGAGCACTCCTGAGCCACAATGTGTCGCTGTTTCTTGTGGAGGGTGGATTCGTAATGCAACAGTTGGCCGAATACTGTCTCCACCACCTCCATCTGTCAGCAACCACAGTAATGGAAACAACCTGAGCTGCCACTGGTTAATAGAAGCCAAAGAGGGACACAGACTCCACCTACACTTTGAGAGGATCGCGCTGGATGAAGATGATGATAAGTTAATTGTGCGCGGTGGAAACAGTTCCCTGTCTCCACCACTCTTTGACTCAGACCTGGATGATGTCCCAGAACGTGGGTTGCTGAGTGAGAGCGCCACACTGTACCTGGAGCTCACAGCTGATTCTTCTTCCATCCCTCTGCTTCTGGCACTGCGATACGAGGcTTTCGATGATGAACACTGCTGGGAGCCCTACATGCCCCATGGAAATTTCAGCAGCAGTGACATCACATATCAGCTGGGCACCACTGTTACCTTCACCTGCGCCCCAGGCTTTGTCATGGAGCAAGGTTCGGGCACGATTGAGTGTGTCGACCCCAGCAATCCCCACTGGAATGACAGCGAGCCTGTGTGCAAAGCTCTGTGTGGAGGGGAGTTGACCGAGCCGTCGGGTACCATCCTGTCTCCTGATTGGCCCCAGAGCTACTCCAAGGGGCTGGACTGTGTATGGCAGATCCATGGCAACGAGGAGAAACGCATTGAACTGGATGTCCAAATTCTAAATATCCGCCACACTGATGTGCTGACCGTTTTTGACGGACGTGATCTAATGTCCCATGTGATCGGACAATACCTGGGGTCCAAAGAGCGTTTCCAGGTTGTGTCTGGGGGGTCAGAAGTCACCATTCAGTTTCAGAGCGATCCAGATGATTCCAGTTTCATCCTGAGTCAAGGATTCCTCATTCATTACCGTGAGGTTGAGCCAAACGACACCTGCCCCACTCTCCCTCAAATTGACTTTGGCTGGATCAGCTCGTCCCACTCCTCCCCTGTGAGAGGCAGTGTGCTGACCTATCAGTGCCAACCAGGATATGACATCAGTGGCTCTGACATCATCACCTGCCAATGGGACCTTTCCTGGAGCAGCAGCCCACCTACATGTGTCAAAGTCCAGCAGTGTCCTGACCCAGGAGAGGTGGTAAACGGAGCGCGCTCAGTGCGCCCCGAGGCAGGTTTTGCAGTTGGAACAGTCGTTCGTTTCTCTTGTAACCAGGGTTATCAACTGGAAGGTCCAAGCCAAATCTCCTGCCACGGCCGAGACACTGGCACCCCCAAATGGAGCGACCGCAGCCCAAAGTGTGTCTTAAAATATGACCCGTGCCCAAACCCTGGTGTCCCTGACAATGGTTACCAAACCTTGTACAAGCACAGCTACCAGGCAGGAGAAACTCTGCGTTTCTTCTGTTATGAGGGCTACGAACTCATCGGCGAGGTCATTATCAGCTGTGTTCCCGGCCATCCCTCTCAGTGGAACAGCCCACCGCCCTTTTGCAAAGTGGCATATGAGGAGCTTTTGGATGATCACAAATTAGAAGTGTCCCAGTCATTTGAGCCGTCCCATCAGATCCTGAGTGAGAACATTGCTTTGGCAATAATTCTGCCAATCATCCTGGTCATCCTCCTGATTGGAGGAATTTACATGTACTATACAAACATCTGCAGACTAGAATGGAAGCCGCTCTTCtggaagtctctctctcacacacactcctacagtCCCATTACAGTCGAGTCCGACTTCAACAACCCGCTGTATGAGGCAGGGGATACGCGGGAGTATGAAGTATCCATTTAAAGGAGAGAATGTCTTGGTGAGAATTGAAAACCACCGAATGATTCAATTCTTTTAGAAGATAGATTCCTTTGTATTATAAGGCCTCACTCCCCTTTTAATATTCATTTCTAATTATCTTTCAGTTTTACCATCCCTGTATCTCTGGTTTATGAATTTGTGGAAGTGCTTTACTTTGATTTGTTGCACTGATATGGTGATCTGCCAAACGTGGGTCCTACTTCACGGTCCAACTTTCTGTATCACTTGGACTGGTGCCTTATGATGGGTAAGAAATTGATAACAAAGTAGAAGAAAAAACAGTTTGGGAGGCATAAGAACAGGAGATGTAAAAAAGGGTGAAGGGAAatggatttatttattaagttaaATTATTATGAGGCCAAAACATTAGAGAACTTGGCAATACTTTATTTGTAACTATCAAAAGTTACAGTCATGAGCATACGCATACACACACTggatgtttttctttcattgtgAGTGGCTcatgttacatttttaagtgtAACAGTAAAAGGGAAGAATACTTTACTTTCAATCATGAGAAAAAGTTTGAGATCAACACAGtcattttctctccttctcactgtctttctctctctctgtgtgtgtgtgtaacacaaacacaaattgaaTGTAAATATCTGACTTAATATTGATTGAGGTTGgtatatatattaaattatatatataagcCTAATATATACACTTATACATGGTGGCTGGGGGTTATATATTTTCATTATATATGTAATGAAAATTCTGTGCCAAAATATAATGTTGAATAATTTATTGTCCCTAAGTGTTTCATCTGTTGTTGCAATACTGTTTACAAAAGCAGTTTATTTTATTCTTCGCTGTTTCTGGAGTGCATAGTCACCCAGTGTCATTTAAGTGTCATGACTCATGACATATAAGGAAAAGGTGAGGACATGAATGTCATTATGCTTAAAGCATGCACTGATTGTAAATTATATTGCTTCTGCTCAATcttgccattatcattatagtTATTGACAGTTATCATTGTTATCAGATTTGATGTTGTATGCACTATGTTGATGAAAAATTACAAACTTGGCTGCTTGCTGTGAtgcattatgtatttatttacaacTGATTGTTTGAACAGTGAATGTAGTCTCATTTACTGTGCCAAATGAAGGATCCAGGAGACTGTTGCTTTGTAGACTTAATTCTTCTCTTATCATCAGTAGCATTTCTTTGCTTCATATATGAATACACTCTTTTGAAGGCAGTAAACTGGAAATAAAGTCTCTGTTGAATGGTGTAAAA

Function

symbol description
sez6l2 Acts upstream of or within brain development. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in brain. Orthologous to human SEZ6L2 (seizure related 6 homolog like 2).

NR:

description
seizure 6-like protein 2 isoform X2

GO:

id name namespace
GO:0007420 brain development biological_process

KEGG:

id description
K24363 SEZ6; seizure protein 6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825615.1 True 4164 mRNA 0.46 19 9020086 9036585
XM_039825617.1 False 4144 mRNA 0.46 19 9020086 9036828

Neighbor

gene id symbol gene type direction distance location
kctd13 kctd13,LOC104945278 coding downstream 1346 9011223 ~ 9018740 (-)
hirip3 NA coding downstream 9155 9003265 ~ 9010931 (-)
antkmt LOC103374876 coding downstream 16935 8998880 ~ 9003151 (-)
xpo6 xpo6,LOC102794690 coding downstream 21716 8973823 ~ 8998370 (-)
nme4 LOC104945280,LOC106931198,LOC106951632,LOC108242919,LOC100703020 coding downstream 46438 8969882 ~ 8973648 (-)
cabp5b LOC104945275,LOC103374841,LOC100700336,LOC104930357 coding upstream 6585 9043413 ~ 9048123 (-)
LOC120574368 NA coding upstream 354737 9391565 ~ 9406804 (-)
LOC120574369 NA coding upstream 371026 9407854 ~ 9408482 (-)
LOC120574660 NA coding upstream 383324 9420152 ~ 9420698 (-)
LOC120574659 NA coding upstream 387681 9424509 ~ 9425046 (-)
G153137 NA non-coding downstream 243820 8700109 ~ 8776266 (-)
G153139 NA non-coding downstream 335333 8659611 ~ 8684753 (-)
G153143 NA non-coding downstream 372795 8647083 ~ 8647291 (-)
G153142 NA non-coding downstream 375061 8644784 ~ 8645025 (-)
G153130 atp2a1 non-coding downstream 403974 8612277 ~ 8616112 (-)
G153274 NA non-coding upstream 24468 9061296 ~ 9111224 (-)
G153275 NA non-coding upstream 28168 9064996 ~ 9085687 (-)
G153455 NA non-coding upstream 159930 9196758 ~ 9203859 (-)
G153456 NA non-coding upstream 162830 9199658 ~ 9501467 (-)
G153462 NA non-coding upstream 182771 9219599 ~ 9219903 (-)
zgc:55558 p-ras,LOC105029053,LOC104950842,LOC104930345,LOC103392975,LOC101069736,LOC106606379,LOC103023536,LOC108413997 other downstream 112424 8895782 ~ 8907662 (-)
tufm tufm,LOC106606342,LOC101070424,LOC106606341,LOC106931188,LOC103145412 other downstream 162515 8850443 ~ 8857571 (-)
natd1 natd1 other downstream 203781 8812330 ~ 8816305 (-)
G153172 mrps34,LOC102799846 other downstream 287067 8731397 ~ 8733019 (-)
G152952 NA other downstream 575705 8441179 ~ 8444381 (-)
LOC120574599 NA other upstream 150422 9187250 ~ 9204006 (-)
LOC120574343 NA other upstream 152556 9189384 ~ 9190066 (-)
LOC120574654 NA other upstream 155158 9191986 ~ 9192402 (-)
LOC120574662 NA other upstream 180241 9217069 ~ 9224455 (-)
LOC120574348 NA other upstream 183713 9220541 ~ 9221090 (-)

Expression


Co-expression Network