zmp:0000000896 (card10)


Basic Information

Item Value
gene id zmp:0000000896
gene name card10
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 5143111 ~ 5161937 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825680.1
CCCCTCCTTCTTCTTTCTTGGCTGCCAATTGGCTGGTTGGGGTTGACCGAGGGTGGAGGATCTGAGCGTGCCAAGGTGTGCGTAAAAGGAGAACCTGTGCGCTCCGGTAGTTCCCACGCACTCACTGACACTTCACTGTttggtttcttcactcctcaCGCGCCTCTGGATCTGAATGGGACGTAGAGGACGCTTTCCTTGGTCTCATTTTCAAAACCGATTCAAGGAGGGTCCCGACATGAGCGGTGTGACAGTTTGGGCGGAGGAGGGGGACATAGCTCAGGAGGAGGTCCAATCTTCTCCCCCCTGGTCAGAGGAGCGCTGTGAAGAGCTTTGGGATCGGGTGGAGGGGGTACGGCACAAGCTCACACGCATCCTCAACCCGGCCAAACTCACCCCGTATCTGCGGCAGTGTAAAGTCATCGATGAACAGGATGAAGACGAGGTGCTCAACTCCACACAGTACCCACTGCGCATCAGCAAGGCCGGTCGTTTGCTGGACATTCTGCGTGGTCAGGGCCCGCGAGGGCTTCAAGCCTTCATGGAATCACTGGAGTTTTACCACCCAGACCAGTACACACAGCTGACCGGAGAACAGGCCACACAGCGCTGCTCCCTCATACTGGATGAGGAAGGCCCGGAGGGATTGACCCAGTTTCTGCTGCTGGAGGTGCGTAAACTGAGAGAGCAGCTTCGAAACACCCGCTTGTGCGAGCGACGCCTGTCTCAGCGCTGCCGCATGGCGGAGGAGGAGCGCAACCGCGCCGAACGTAAAGCTCAGGACTTACGTCAGGACAAACTGCAGCTGGAGAGGTTGCGTCATGACTGGGAGTCGGCCAGTCGAGAGCTGGGCAAGCTGAAGGACCGGCACCTGGAGCAGGCTGTGAAGTACTCCAGAGCCCTGGAGGAGCAAGGCATGGCCTCCAGCCGCGAGAGAGAACTACTGAGGCAGGTTGAGGAGCTGAAGTCCAGGCTGACAGAGGCAGAAAAACATACAGTCGATACTTCAGGAAATAATATTCCGGCAAAAAGAAACAGTTTGCTCTCTAATGGAGTAAAAGGTTCTCCGCCTGCTTTACCAGAAAAGCCGCAGCGGCGTACTGAAGTTCAGAAAGAGGAGAACACAGGGACTCAGATGAAGGACTCCGGTCCTACCACTGGAGTCATAGCTCTGATGGACATCCTGCAGCAGGACCGCAGGGAGGCTGCAGACCAGAGGCAGGAGCTGTGTGACATCATTACCCGACTACAGGGGGAGCTACAGAGCACTGAGGAGCACTGGGAGAAGCTGGAGTCGCAGTGCGAGCAGCTCCAGCTGAAGGTGAGGACTCTCCAGCTGGACTGGGAGACGGAACAGAAGAGGAGTATGTCCTACTTCAACCAGATCATGGAGCTGGAAAAGGAGAGAGACCAGgcTCTGCGTAGTCGAGACAGCCTGCAGTTGGAGTACACCGACTGCCTGCTGGATAAGAACCGTCTGCGCAAACGCATTGCAGAGCTGCAGGCCAACgtggagcagcagcagagggagctggagaaagagagggagaggggccGCGAGCTAACAGAGCAGAGCAGCCTCTGTCTGAACTGTTCCCACCTGTCCCTGTGCAGTGAGGACCAGTGCTACGGCCCCTGCTGTTCCCTCGGCCTGGACCTGAGACCCCAGGCCGGTGGCACCCGCCTGCTGCTACGAAAGACGCCCTCGAGTGGCCAAGCCAATGAAAACTCAGAGGATTCTCGTTCCAACTCCGAGGAGAATCTCCGTTTGTCAACTCAGACAGAagacaatgaaaaagaaataaatcggCTCTCCACATTCCCCTTCCCTCCGTGTATGAACTCCATCAACCGACGATTCAACACAGAGTTTGACTTGGAATCATCATGGGGCAGTGATGAGAACGATAACATTACAGGTGAGCCGAGTGAACCTTCTTTGTGGGACTCCTGTAACTCGCTACACTCTCATCTCTTCCCCCCTGACCTGGTCAACCTGCCTGCAGTCTCTCCACACCAACCCAACACTAGTGCTCCCAGGATTCCCTCCCGCTCCCCGTCCTCAAGCCCCCCCATCTCACCAAAGCACGGGAGAACCAGTCTAGCTGACGATATTACGCTAGTCGGAGGGAACCAAACAGGGATCTTCGTCAGCCATGTGAGAGCTGGTTCCCCAGCTCAGCTATGTGGACTGAAGGAGGGCAGTGAGCtgctggagCTTGAGCGCGTTCTGTTTGGTGGGGGCAGTGTGATGCTGGGCCAGTGCACTGCTGAGGTAGCCCACTTTTCCCTGCAGTGGTGGTCCGAGCCTTCAACACTCAAACACCAGAGCAACCCAGAGGGATACTCCAAGCTGTGCTCCCAGCTCTCGTCGCCTACTTTTATGGGTGCTGACTCCTTCTATGTGCGTGTCAATCTCAACATGGAGCCTTGCGGTGACCCGCCCTCTCTGGGTGTGTCCTGTGATGACATTATACATGTCACAGACACaagatacaataaaaaatataattggcACTGTTCCCTGGTGGACCCGCACACAGCCAAGCCCCTGCAGGCAGGAACCATGCCCAACTACAACAGGGCACAACAGTTGTTACTTGTAAGACTACGAAAGATGTCCCTGGAGCAAAAGGACTTCAAGAGGAGGTTCCTGAAGAAACCATCTGGACGTGTACGATTGGTCAAGGCAGTGGACCCCAGTGGCCGTGGGATTGGTTCCACACAGCAGGTCCTTTACACACTCAACAAACGTCACGAGGAGCACTTGATCCCGTACAGTTTAGTGCAGCCGGTGCAGGTTCAGACTAAGCGGCCGGTcatcttctccccctcccttctctcCCGCGGTCTCATAGAGAGGCTGCTGCAACCTGCAGATTCTGGTTTGAAGTTCAACACCTGCCTTCCAGAGCCTATCCAGGCTTCAGAGAGACGTGGCGAGAGAGTGTTCCTGTTGGACCCCCGCAGCCCAAAGCAGGCTCTGGGAATACGGCTGCAGTCAATACAGGATGTCATCAGCCagGACAAGCACTGTCTGCTGGAGCTGGGGCTGCCCAGTGTTGAGGGCTTATTGAGACAGGGGATTTACCCTATCGTCATCCATATCCGCCCTAAGAACAAAAAGCACAAGACGCTAAGGAAGCTTTTTCCCCGGTGTGGAGAGGACAGCGTAATGGAGGAGGTGTGCCAGGCCGAGGAGCTGCAGCTGGAGACGCTGCCCCTGCTCTACTACACCCTGGAGCCCAGCGCCTGGAGCAGCACTGAGGAGCTGCTGGCAGCCATACGCAATGCCATCCACAGCCAACAGAGGGCAGTAGCATGGATCGAACTGGATAGGCTGCAGTAGAAGAGAAA

Function

symbol description
card10 Predicted to enable CARD domain binding activity. Involved in activation of NF-kappaB-inducing kinase activity; negative regulation of cell migration involved in sprouting angiogenesis; and positive regulation of protein localization to nucleus. Predicted to be active in cytoplasm.

NR:

description
PREDICTED: caspase recruitment domain-containing protein 10

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825680.1 True 3357 mRNA 0.56 25 5143111 5161937

Neighbor

gene id symbol gene type direction distance location
LOC120575075 LOC103368117 coding downstream 1998 5124962 ~ 5141113 (-)
LOC120575081 csnk1e,LOC101067908 coding downstream 19602 5111472 ~ 5123509 (-)
LOC120575080 tmem184b,LOC102777864,LOC101067677 coding downstream 31799 5093585 ~ 5111312 (-)
LOC120575087 ddx17 coding downstream 49970 5083750 ~ 5093141 (-)
LOC120575086 NA coding downstream 71012 5063039 ~ 5072099 (-)
LOC120575084 LOC105918010 coding upstream 114270 5276207 ~ 5281641 (-)
gucy2ca gucy2c coding upstream 147663 5309600 ~ 5326670 (-)
LOC120575093 LOC104932054,LOC103370794,LOC101074219,LOC100695912,LOC101476535 coding upstream 188232 5350169 ~ 5358831 (-)
polr3h polr3h coding upstream 198520 5360457 ~ 5366750 (-)
LOC120574211 aco2,LOC103370792,LOC105918004 coding upstream 205128 5367065 ~ 5384844 (-)
G151951 NA non-coding downstream 119019 5013517 ~ 5024092 (-)
G151924 NA non-coding downstream 249793 4869887 ~ 4893318 (-)
G151799 NA non-coding downstream 558951 4583204 ~ 4584160 (-)
G151790 NA non-coding downstream 619537 4518781 ~ 4523574 (-)
G151785 NA non-coding downstream 664232 4477384 ~ 4478879 (-)
G152052 NA non-coding upstream 8367 5170304 ~ 5170652 (-)
G152081 NA non-coding upstream 125921 5287858 ~ 5290361 (-)
G152104 tob2 non-coding upstream 228568 5390505 ~ 5395115 (-)
G152107 NA non-coding upstream 284566 5446503 ~ 5448057 (-)
G152233 ep300 non-coding upstream 346780 5508717 ~ 5509392 (-)
LOC120574081 grin2b,fmc1,LOC102794452,LOC102794917 other downstream 377618 4585173 ~ 4765493 (-)
LOC120575466 LOC102292836,LOC101471904,LOC100692969,LOC103393382,LOC103468414,LOC102212070,LOC103143659,LOC102784177 other downstream 678120 4416177 ~ 4464991 (-)
LOC120575464 NA other downstream 775768 4361848 ~ 4367343 (-)
G151344 smarca4 other downstream 1826196 3311727 ~ 3316915 (-)
G151227 LOC103393680 other downstream 2227744 2911326 ~ 2915367 (-)
G152043 cdc42ep1,LOC102301584,LOC102206375,LOC102078793 other upstream 16379 5178316 ~ 5227241 (-)
G152114 rbx1 other upstream 299909 5461846 ~ 5464418 (-)
top3a top3a,LOC102783137 other upstream 387354 5549291 ~ 5567539 (-)
atp5mf atp5j2,LOC102786280 other upstream 412743 5574680 ~ 5613722 (-)
bud31 bud31,LOC106595689 other upstream 418326 5580263 ~ 5582864 (-)

Expression


Co-expression Network