narfl (narfl)


Basic Information

Item Value
gene id narfl
gene name narfl
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 12138068 ~ 12142317 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825748.1
CGACACAAAAGTAAACAACAAACACTTTACGGCAGTAATTATGGCTTCGCACTTTAGCAGTGTGTTGCAGCTGACAGATCTCGATGATTTTATCACACCCTCTCAGGAATGTGTAAAACCTATTAAAATAGAGAAGAAACAAGGTAAATCTTTGGCCAAGATTCAAATAGAAGATGATGGCAGTTACGTCCAAGTCAACCAGGATGGTGGGAAGCAGAAGCTGGAGAAAGCAAAGATCTCACTGAATGACTGTTTGGCCTGCAGTGGCTGTGTCACCTCAGCTGAGAGCGTCCTCATCACGCAGCAGAGCCACGAGGAGCTCTTAAAAGTGCTGCGCAATAACAAGTTAAACGCGACAGAGCagaaggtggtggtggtgtcggTGTCACCGCAGTCCAGAGCCTCCCTCGCAGCATACTTTGACCTCAGCAGTAGTGAGACAGGCAGGAGGCTCACATCCTTCTTTAAAGGCCTTGGGGTTCATCATGTGTTTGAAACAAGCTTTAGTCGGACCTTTAGCCTGCTGGAAAGCCAGAGAGAGTTCGTGGAGCGTTTCCAGAGGAAGGAGCAGGACAGCAACAGACTTCCCATGCTGACATCGGCCTGTCCAGGTTGGATTTGCTATGCAGAGAAGACCCATGGCGAGTTTATTCTTCCATACATTAGTACCACTCGCTCCCCCCAGGCGATGATGGGCTCTCTGGTTAAAGGCTATTTTGCTGAACAACAGggGTTAAGTCCACAGCAGATCTACCATGTGGCAGTTATGCCCTGCTTTGATAAGAAACTTGAGGCCTCGAGGTCAGACTTCTACCTGGAAAAAGACGAGACTCGAGAAGTGGACTGTGTCATCACATCTGGAGAGGTTCAGAAAATGCTGGAGGAGAAAAATGTGTCTCTTAATGATGTGGAACCTGCACCCCTAGATACATTGTTCAGCAGTGTGAGTGGGGGCGAGTTCCTGAGCCATGCCGGAAGCGGGTCAGGGGGTTACCTCCATCATGTCTTCACCTATGCTGCTAAGCAGCTGTTTGGAGAGGAGGTGAAGGATCTCACGTACAAGATCCTCAGGAATAACGACTTCCAAGAAGTGACTCTAGAGAAAGATGGAGTAGTCTTGTTGAACTTTGCTTCCACGTACGGATTCCGTAACATCCAGAACCTGGTGCAGAAACTTAAGAGGGGGAAGTCACCTTACCACTTTGTGGAAGTTATGGCCTGTCCATCAGGTTGTCTAAATGGTGGTGGACAGGTGAAGCCCAAACCTGGTCAGAGCCCAAAGGAGCTTCTCCAGAAAGTTGAGGAGCTCTACAAGGCAGAGCGCTCCCTATCACCAGAAGATGACACCCGTGTGGCCGAGCTGTACCAGTCCTGGCTCCACAGTGTAGGGGAGGAGAGAGCCAAAgagctgctgcacacacactaCCACCCTGTGGAGAAGATGAAAAACGGACTCACTATGAAGTGGTGAAACAAGCTTTTGCTACAATCCATGATAAGCGCATCATTTTTCAGCAAACACTGACTACAGAACCGTCCAAATATAACtgactttttctgtctctcttcaggGTTATGGGCAAAGTCAAATATAAGCAGTTTTGATGTATGCCAATAACCTGTTAAACCACTTCTCCCCTCATCTAAAAATTGTGTGCCTGGCAAAGTGGAAGATAATAGGCGTAGATAGTAGACACAATGTTGAAGCCAAATTATTTATTTGGTCTGATTATTTGCCATTACAGTATACTGCTGATTGTCCTTTCAAATGTATAGTAAATCATTCATTTGTTTGGGACCTGTTACACTTGAAAATGTGAGCTGAAATAACACAAAGAAAAGTATAATCATT

Function

symbol description
narfl Predicted to enable 4 iron, 4 sulfur cluster binding activity. Acts upstream of or within sprouting angiogenesis. Predicted to be part of CIA complex. Is expressed in several structures, including eye; gill; heart; liver; and pleuroperitoneal region. Orthologous to human CIAO3 (cytosolic iron-sulfur assembly component 3).

NR:

description
cytosolic Fe-S cluster assembly factor NARFL isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825748.1 True 1852 mRNA 0.47 11 12138068 12142317

Neighbor

gene id symbol gene type direction distance location
fahd1 fahd1 coding downstream 9470 12127467 ~ 12128598 (-)
LOC120574725 NA coding downstream 54364 12080475 ~ 12083704 (-)
LOC120573975 LOC104957814,LOC103361744 coding downstream 62251 12062780 ~ 12075817 (-)
ndufb10 ndufb10 coding downstream 80267 12055838 ~ 12057801 (-)
tbl3 tbl3 coding downstream 88798 12028027 ~ 12049270 (-)
arhgap17b LOC103361731,LOC100693200,LOC102795553,LOC101468818 coding upstream 43780 12186097 ~ 12213659 (-)
LOC120573971 LOC104964789,LOC103361754 coding upstream 78852 12221169 ~ 12226568 (-)
cbx4 cbx4,LOC102794988,LOC102309824,LOC102204981,LOC101467610 coding upstream 86800 12229117 ~ 12244745 (-)
tbc1d16 tbc1d16 coding upstream 133050 12275367 ~ 12297433 (-)
gaa gaa coding upstream 156000 12298317 ~ 12307166 (-)
G154248 rps2 non-coding downstream 82864 12052806 ~ 12055204 (-)
G154246 NA non-coding downstream 115564 12022297 ~ 12022504 (-)
G154245 NA non-coding downstream 115878 12021527 ~ 12022190 (-)
G154231 NA non-coding downstream 125588 11969405 ~ 12012480 (-)
G154187 NA non-coding downstream 307885 11829944 ~ 11830183 (-)
G154305 slc5a11,LOC102796461 non-coding upstream 41294 12183611 ~ 12183825 (-)
LOC120574757 NA non-coding upstream 218922 12361239 ~ 12373994 (-)
G154368 NA non-coding upstream 257935 12400252 ~ 12401475 (-)
LOC120574719 NA non-coding upstream 424861 12567178 ~ 12567810 (-)
LOC120574718 NA non-coding upstream 425902 12568219 ~ 12568696 (-)
LOC120574419 NA other downstream 47087 12085985 ~ 12090981 (-)
G154033 NA other downstream 912522 11203450 ~ 11225546 (-)
tnrc6c1 LOC103361861 other downstream 1000540 11098316 ~ 11137528 (-)
LOC120574486 NA other downstream 1057461 11078545 ~ 11080607 (-)
LOC120574455 NA other downstream 1346503 10784112 ~ 10791565 (-)
cep112 NA other upstream 285187 12427504 ~ 12565471 (-)
LOC120575506 LOC100697827 other upstream 593127 12735444 ~ 12737483 (-)
iqck NA other upstream 812657 12954974 ~ 12972829 (-)
sun1 sun1,LOC104947709,LOC102193096,LOC103360714 other upstream 830943 12973260 ~ 13012781 (-)
prkar1b prkar1b,LOC107661853,LOC107653458 other upstream 1193132 13335449 ~ 13421951 (-)

Expression


Co-expression Network