LOC120575117


Basic Information

Item Value
gene id LOC120575117
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 11489905 ~ 11491799 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825749.1
CCCCCTTCTCGTCGGCGGTGTCAGTTATCTTATGCTTCAGATTTCGATGGCGTGAAACTATAAAAAGGTCACCGGGAACACCGGGAAGATCACTGCAGTCGACTCGAGTCTTGGCCGTATCATCTGTACCCTACACAGCAAAGAAACCAGAGAGATCGAAATGGCCGTCGCAGGAGTACTGAAAGATGCTGAAGTCGCTGCAGCCCTGGACGGGTGCAAAGAGCCTGGCACATTCGACCACAAGAAATTCCTCAAGGCATGCGGTATGTCCGGCCAGTCTGCCGAAGAGATCAAGAAGGCCTTCAAAATCATTGACCAGGACAACAGTGGATTCattgaggaggaggagctgaaGCTGTTCCTGCAGAACTTCAAGGCAGGTGCACGCGCACTGACCGACGCCGAGACCAAGACTTTCCTTAAGGCCGTTGACACCGACGGTGACGGCAAGATTGGCGCTGATGAGTTCGCTGCCATGGTTAAGGCATAAAGTGGCAACTGACCAACAACACCTGCTCTGATGGAACAACAAAGCCCTCATCGACCTCCCCCGTTTTCatctaaatataaataatttttatacATTTGCTTAAGAGACGTTTCCTCCTATGCAACACACTGTCCAAAAATGATGATTGTGAATGTCGCTCGGTTGTGTTAATGTCTTAAATATGAATTTTGCTTACTGTAAAATCTATGATGCACTTTCCAGGTAAAaacggttaaaaaaaagaaagaataaatattattttactgCGGTA

Function

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825749.1 True 761 mRNA 0.47 5 11489905 11491799

Neighbor

gene id symbol gene type direction distance location
trnaq-cug_14 NA coding downstream 2980 11486854 ~ 11486925 (-)
pvalb8 LOC103469263,LOC103141687,LOC103361838,LOC103141679,LOC104946075,LOC102232223 coding downstream 4246 11482048 ~ 11485659 (-)
aimp2 aimp2,LOC102781367 coding downstream 14095 11470019 ~ 11475810 (-)
LOC120575167 LOC101482156,LOC104918850,LOC102192500,LOC100691827,LOC108239183,LOC101072104 coding downstream 20344 11446935 ~ 11469561 (-)
cacng1b LOC102192213,LOC100704449,LOC103361845,LOC101079816,LOC108239284 coding downstream 47105 11432470 ~ 11442800 (-)
LOC120575118 LOC106943715,LOC104918845,LOC103141685 coding upstream 1585 11493384 ~ 11496059 (-)
pvalb5 LOC104918844,LOC108239293,LOC100693182,LOC101480216,LOC102194634,LOC104946078 coding upstream 6517 11498316 ~ 11501224 (-)
tecpr1b LOC102779071,LOC100705253,LOC102296174 coding upstream 43231 11535030 ~ 11549060 (-)
baiap2l1b baiap2l1,LOC103367811 coding upstream 66062 11557861 ~ 11588233 (-)
nptx2a nptx2,LOC102777833,LOC101477389,LOC100706047 coding upstream 109534 11601333 ~ 11613286 (-)
G154115 NA non-coding downstream 22793 11466908 ~ 11467112 (-)
G154088 NA non-coding downstream 137340 11352203 ~ 11352565 (-)
G154036 NA non-coding downstream 217057 11271819 ~ 11272848 (-)
G153987 NA non-coding downstream 416129 11069043 ~ 11073776 (-)
G153943 LOC104934589,LOC102791985 non-coding downstream 454389 11033206 ~ 11035516 (-)
G154163 bri3,LOC104946088,LOC103141671 non-coding upstream 37897 11529696 ~ 11557733 (-)
G154173 NA non-coding upstream 148229 11640028 ~ 11641512 (-)
G154175 NA non-coding upstream 151318 11643117 ~ 11649924 (-)
G154187 NA non-coding upstream 338145 11829944 ~ 11830183 (-)
G154231 NA non-coding upstream 477606 11969405 ~ 12012480 (-)
G154033 NA other downstream 264359 11203450 ~ 11225546 (-)
tnrc6c1 LOC103361861 other downstream 352377 11098316 ~ 11137528 (-)
LOC120574486 NA other downstream 409298 11078545 ~ 11080607 (-)
LOC120574455 NA other downstream 698340 10784112 ~ 10791565 (-)
gtpbp1 gtpbp1,LOC104924447,LOC102799794 other downstream 1099729 10352158 ~ 10390176 (-)
LOC120574419 NA other upstream 594186 12085985 ~ 12090981 (-)
cep112 NA other upstream 935705 12427504 ~ 12565471 (-)
LOC120575506 LOC100697827 other upstream 1243645 12735444 ~ 12737483 (-)
iqck NA other upstream 1463175 12954974 ~ 12972829 (-)
sun1 sun1,LOC104947709,LOC102193096,LOC103360714 other upstream 1481461 12973260 ~ 13012781 (-)

Expression


Co-expression Network