LOC120575134


Basic Information

Item Value
gene id LOC120575134
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 14285174 ~ 14288819 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825773.1
ATGAATCTCCTTGACGCTTACCTAAAGATGACAGAAGAACAGGAGAAGTGTCACTCTGACGCTCCCAGTCCCAGCATGTCTGAGGACTCCGCAGGCTCGCCGTGCCCATCCGGGTCCGGTTCGGACACTGAGAACACCCGGCCGTCCGACAACCACCTCCTCTTGGGTCCAGACTACAAGAAGGAAGGCGAAGAAGAAAAGTTCCCCGTGTGTATCAGAGATGCGGTGTCCCAGGTGTTGAAGGGTTACGACTGGACGCTGGTGCCCATGCCGGTGCGCGTTAACggctcaagtaaaagtaaacctCACGTCAAAAGACCCATGAACGCATTCATGGTCTGGGCTCAAGCTGCACGGAGGAAGCTGGCCGATCAATACCCGCATCTGCACAACGCGGAACTCAGCAAAACCCTGGGCAAACTTTGGAGATTGCTCAACGAAGTAGAGAAGCGCCCGTTTGTGGAAGAAGCTGAGCGTTTGAGAGTGCAGCATAAGAAGGACCACCCCGACTACAAATATCAGCCAAGGAGGAGAAAATCTGTCAAGAACGGGCAAAACGACCCCGAGGACGGCGAGCAAACCCACATCTCTCCAAATGCGATCTTCAAGGCGCTGCAGCAGGCCGATTCTCCAGCGTCTAGTTTGGGCGAGGTGCATTCTCCAGGAGAGCACTCAGGTCAGTCCCAGGGCCCACCAACACCCCCAACCACCCCCAAGACAGACCTCCACTCTAGCAAAGCTGATTTGAAGCGCGAggggcgccccatgcaggaggGCACCAGTCGCCAGCTCAACATCGACTTTGGAGCTGTGGACATTGGCGAGCTGAGCAGCGAGGTCATCTCCAACATGGGGAGCTTTGATGTCGATGAGTTTGATCAGTACCTGCCTCCACACAGCCATGCTGGGGTGCCCGGAGCGGCCCAGGCTGGCTACACCAGCGGCTACGGCATCAGCAGCTCCTCAGTCAGCCAGGTGGCCAATGTTGGGGCCCACGCCTGGATGtccaagcagcagcagcagcagcactctcTGACAACCctgggtggaggaggagagcaAGGCCAGCAGGGTCAGCAGAGAACCACCCAAATCAAGACAGAGCAGCTGAGTCCCAGCCACTACAGTGAGCAGCAGGGCTCCCCACAGCACGTCACCTATGGGTCCTTCAACCTGCAGCACTACAGCAGCTCCTCTTACCCCTCCATCACAAGAGCACAGTATGACTATTCAGACCACCAAGGTGGTGCCAACTCCTACTACAGCCACGCAGCTGGCCAAAGCTCCGGCCTGTACTCCACCTTCAGCTACATGAGCCCCAGCCAGAGGCCGATGTACACTCCGATCGCTGACACCACCGGGGTGCCCTCTGTTCCCCAGACCCACAGTCCGCAGCATTGGGAGCAGCAGCCCATTTACACACAGCTCTCCAGGCCATGAGGAGACGGCCCTCAGCACTGACTCTACAACACCAATCCCATGCATAGACTTTTTTCTGCCTGGTGCCCTTTGTGCCACCATGCCACACACCTTTCATTGCCAACAGAAAAACAtgacaatgacttttttatagtACTGAAAATATATCTTTGGATTGGCTCACAACAGTGCCTTTTGTATTGGTTGGaattgtgattatatttttttagatataatgtttaaaaaaagtttaatcCTCTGTGAGGACATACTGGTTATAAATATTTTAGTATGTACTGTGTATGTGTTCTGCTcttgtcatcatcatcaacatcatcaacaacatcatcatcatcatcataatcagTGTCATTAGCATCCTCATCATCACAATTTGAAGGTTTAACCCATTTAAAGGAGCTGGAAAGCTGGGTAAAAACACCCTCAGTGGCCTTACTTCTCACTAATGTATTTGTGTACAGAAGTAAGAAACGTCTGACACTGCCGTCTTATAGTACCTTACAGCCTACATTCTGTATTGAACTtttgtactgtacatattttaTTGTAATTCTCATGAGATGCAAGAATTGAGCAATGCAGGttcaaaatagatttgaatTTTTGGCCATGATATGACCGTGTCGTCAGTGAATTAGTCAAATATTCTACTTCTTGTTGTTTGCTTTAGCTCAAATGATTGTGCTGGAAACGCAATAGCAGGTGTCATGTAATTCTATAGGGGCCTTACCGTGTTGCTAGATGTAACTGAGCAATGCTTGCTTTTATCTGGGTACTGCCTTGATACCATTGGTGCCTCTGGAGCCACAGTGGAGAGGCTCCTTCCACTGGCATTGCAGTGTCGAAACCACAGCATAGTTCTGACTTCCTGCTGGAGGAGATGCAGGAAGTGACCTCTGACCTGATTCTCCTCAGCAGCCAGCAGGTCTAAGTCTGGCCGTGCTTCTATCATTCCTACAGCCCCGTCCTTTTTCCTAACCTTTTTCTTAATTTATTCTTTAGcattaattttatttgaaaataactATTTGGAATTACCTTTTTAATTCAGCAGCAGCTAACTGAGATGGTGGAATAGTTTGCTGTCATATGTGGTAcaaatttgtttatttatcatttgtaaatgttttcgtATAAAAGTTTAGTTATGTACAGATTACTTACTGTACACAATGAGTCTttctctaaaaaaaagaaaaaactggaagttttctctttttttctttctaacaaaTGATTTAATGAATATGGAAGCCGTGGCTGTTTTTGTAAAGAATTTGTTGGAATCAACaggatacttttttttctttgaaaaaaacgTTATGTTCCTCATTTTATATTCTCTATCATTAGTTCTCATCTCGTCATCTCCTTAATGCAGTTTCCGTAGGTAACATGGCATTGTCTTAAAAGCTTATCTTTTTGTATTATATTGtttgcaataaaaacaaaacactgagaAATA

Function

GO: NA

KEGG:

id description
K18435 SOX9; transcription factor SOX9 (SOX group E)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825773.1 True 2905 mRNA 0.47 3 14285174 14288819

Neighbor

gene id symbol gene type direction distance location
LOC120574465 sstr2,LOC104918336,LOC102291375,LOC103373483 coding downstream 178351 14099455 ~ 14106823 (-)
LOC120575451 rab26,LOC102798624,LOC101484267,LOC100707100 coding downstream 334418 13884337 ~ 13950756 (-)
LOC120575446 LOC104960164 coding downstream 421640 13860150 ~ 13863534 (-)
hmox2b LOC103358700,LOC108247647,LOC100705244,LOC101479559 coding downstream 520638 13757750 ~ 13764536 (-)
coro7 LOC103358706,LOC106915773 coding downstream 536572 13636809 ~ 13748602 (-)
rnf213a rnf213 coding upstream 95283 14384102 ~ 14417141 (-)
LOC120575368 NA coding upstream 130543 14419362 ~ 14427318 (-)
LOC120575370 LOC104945235 coding upstream 141202 14430021 ~ 14439111 (-)
LOC120575491 pcyt2,LOC103373415,LOC101487187 coding upstream 152984 14441803 ~ 14451655 (-)
pycr1a LOC103373386,LOC104918329,LOC106533854 coding upstream 183276 14472095 ~ 14475790 (-)
G154788 NA non-coding downstream 185893 14078514 ~ 14099281 (-)
G154791 LOC100698953,LOC106518679,LOC103373486 non-coding downstream 197408 14085742 ~ 14087766 (-)
LOC120575453 NA non-coding downstream 338777 13936768 ~ 13946397 (-)
G154717 NA non-coding downstream 457383 13755664 ~ 13827791 (-)
G154723 NA non-coding downstream 509185 13774102 ~ 13775989 (-)
G154825 NA non-coding upstream 37154 14325973 ~ 14326936 (-)
LOC120575037 NA non-coding upstream 42126 14330945 ~ 14337074 (-)
G154948 LOC104962285,LOC104925065 non-coding upstream 338931 14627750 ~ 14664671 (-)
G154952 cyth1,LOC103140955,LOC102194078 non-coding upstream 344359 14633178 ~ 14636802 (-)
G154953 cyth1,LOC103392816,LOC101076412 non-coding upstream 351283 14640102 ~ 14647069 (-)
med9 med9 other downstream 227820 14050738 ~ 14057354 (-)
tfap4 tfap4 other downstream 653338 13589483 ~ 13631836 (-)
prkar1b prkar1b,LOC107661853,LOC107653458 other downstream 863223 13335449 ~ 13421951 (-)
sun1 sun1,LOC104947709,LOC102193096,LOC103360714 other downstream 1272393 12973260 ~ 13012781 (-)
iqck NA other downstream 1312345 12954974 ~ 12972829 (-)
LOC120574967 mafg,LOC104918330,LOC108241257,LOC103373400,LOC101487863,LOC106533856 other upstream 166018 14454837 ~ 14471430 (-)
cenpx cenpx other upstream 237307 14526126 ~ 14529153 (-)
LOC120574989 LOC108241285,LOC103373333,LOC106518659 other upstream 244863 14533682 ~ 14543994 (-)
LOC120574213 NA other upstream 476915 14765734 ~ 14790778 (-)
LOC120574214 bahcc1,LOC106528540,LOC108241329,LOC107083174 other upstream 506827 14795646 ~ 14828239 (-)

Expression


Co-expression Network