LOC120575176


Basic Information

Item Value
gene id LOC120575176
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 14869942 ~ 14874632 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825829.1
TCTGACCTCCAGAGAAAGGAACGCTGGTCCacttattttctgttttctctAGGTGTATTTTCTGCAATCATCGTACGCAGTTTATCTTTGTCATGATATAAACAGGTCCAAGCATCCTTTAGACCTGCCTCTGACTTGTTTTGTGACGTACAGTCACAAGATGAGAACTGTTGCTCAACAGATGCTCCTGACCTGCAACAAACTTCTCTCTAGGAAAACACCAAATGATGTTATTGAGGCCCATCCATCCAACATTGAGACGGCAGCACAGATGAACAACATCCAACATTTGCCCAGCCCTCCTCATGCTCCCAGTGTGAGAGCGAGCGTTCGCCATGTGGAGGCGGTGGTGAGGGCCCACCGTAGTGGTGGATGGCTCCTGTCTGGCATCATCTGCATCAACATCCTGATCCTGGGCTGCGCTCTAGTCAGCGGCAGTGCTTTCAACATCGTGGCCATTACTGCTGAGCACAGGCAAATCTTCCTCatcattctcctcctcctcactatGTTGTGGATGCTGTTTTACGCAGTCTTCACCTCTCGAAAGGATCAAGCAGTTTTGTTCAAGGATAGCCACGCGGGGCCTGTGTGGCTCCGAGCTGGACTTCTGTTGTTTGGGTTTCTCAGTTTCCTCATCGACATCTTCAGGATTGTCACTTATGTGGGCTACCTTCACTGTGATTCTGCTGTTAACCCTCGTATTATGGTTAAAGTTGCCTTCCCTGTCGTACAAGctctgtttctgtttgtccagACATACTTCCTGTGGATTCATGCAAAGGACTGTGTGGAGCTACACACAAATTTAACGCaGTGTGGGCTTACTCTAACGCTTTCAACTAACCTGGTGGTGTGGATGACAGCAGTTACTGAGGAATCAGTTCACCAGACTAAGATACCTGATCTAAATTTCACTGTCTCACAGAAGATCTACAAAGCCAGCTATGACAAGTGTACTTGCAGCCACTCGGTGTGTGACACCTTCAAAGAAGCCTCCTACTACCTGTACCCCTTCCACATAGAATACAGCCTCTTTGCTTCGGCTATGACCTACGTCATGTGGAAAAATGTTGGTCGGGTTGTGGCCGATCACAGCCACCACAGTGTTAAATTCCGTCCAAAGGATGTGTGTTTGGGACCTGTAACAGGAATACTCCTGGTGGTGGCAGGAGTTGTAACATTCATAGTGTACGAGGTGGACATACTAACGGAGGACAAGAAGAGAAACCAAGCTCTGCGGATTCATTTTATTATGAATATAGTGATAGTGAGCCTGATGTGCCTCTCCACTGTGATTGGCTGTATCATCTACAGGCTGGACCACAGGGAACACGTATCGGAGAAAAACCCCACTCGCAGCCTGGATGTGGGGCTGCTGGTGGGAGCCTCACTGGGCCAGTTCATCATCAGCTATTTCTCGATTGTGGCTGTGGTGGCAACCGGAGCCAAAGGGTATCTGAACGGCCTCAACCTATCCTGGGCCGTGCTGATGGTGCTCCAGCTCGGCCTGCAGAACTACTTCATCATCGAAGGCCTCCATCGGGAGCCCTTCCACGTGATGCAGGAAGCAGCTCTGCACACAAACGCTCACGCCTTCCAGGAACATGACATGAGCGTTGTCCCGAAGAGCCGTAAGTCCAGGTACTTCCTGACGTCAAGCTGTGATAAGCCATGTTGGAAAAGAAGAGTACTGAAGGAAGTCTGTGCCTTTTTGCTGCTTGGTAACATtattCTGTGGATCATGCCTGCCTTCGGTGCTCGTCCCCAGTTTGATCATCCCATCGAGATACAATTCTACACATTCACAATGTGGGCGACCATTGTGAATATCGGACTTCCTTTTGGAATCTTCTACCGCATGCACTCTGTCGCCAGCCTCTTTGAGGTGTTCTTATTCTGTTAATTTTTGAGCATGGAGTGAATTTGATGATctattttattgtttaaattgaacttgttatattaaaacatttaaattcctatatattta

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle
ko04115 p53 signaling pathway
ko04914 Progesterone-mediated oocyte maturation

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825829.1 True 1993 mRNA 0.48 8 14869942 14874632

Neighbor

gene id symbol gene type direction distance location
fscn2a LOC104925063,LOC104962304,LOC103373227,LOC101170272 coding downstream 121912 14740537 ~ 14748030 (-)
LOC120575160 tmem235,LOC104962294,LOC100710065,LOC101469204 coding downstream 139893 14717993 ~ 14730049 (-)
LOC120575183 NA coding downstream 337292 14529438 ~ 14532650 (-)
notum1a notum,LOC104918326 coding downstream 381019 14481337 ~ 14488923 (-)
LOC120575481 myadml2,LOC103373375 coding downstream 390568 14476834 ~ 14479374 (-)
LOC120575070 map2k6,LOC103373127,LOC100697168,LOC103392800,LOC102787166 coding upstream 62336 14936968 ~ 14950077 (-)
btbd17b LOC103373589,LOC104944234 coding upstream 75632 14950264 ~ 14954273 (-)
ccdc137 ccdc137 coding upstream 89663 14964295 ~ 14969477 (-)
LOC120573908 tspan10 coding upstream 98720 14973352 ~ 14975399 (-)
LOC120574429 LOC105009787 coding upstream 124141 14998773 ~ 15000144 (-)
G154948 LOC104962285,LOC104925065 non-coding downstream 205271 14627750 ~ 14664671 (-)
G154953 cyth1,LOC103392816,LOC101076412 non-coding downstream 222873 14640102 ~ 14647069 (-)
G154952 cyth1,LOC103140955,LOC102194078 non-coding downstream 233140 14633178 ~ 14636802 (-)
LOC120575037 NA non-coding downstream 532868 14330945 ~ 14337074 (-)
G154825 NA non-coding downstream 543006 14325973 ~ 14326936 (-)
G155025 NA non-coding upstream 20747 14895379 ~ 14895624 (-)
G155039 NA non-coding upstream 88601 14963233 ~ 14963846 (-)
G155047 NA non-coding upstream 110502 14985134 ~ 14985364 (-)
G155106 NA non-coding upstream 281797 15156429 ~ 15162435 (-)
G155126 NA non-coding upstream 437448 15312080 ~ 15313592 (-)
LOC120575102 fam104b,LOC103373210,LOC101470236,LOC107083185,LOC102083140 other downstream 12362 14851939 ~ 14857580 (-)
LOC120574214 bahcc1,LOC106528540,LOC108241329,LOC107083174 other downstream 41703 14795646 ~ 14828239 (-)
LOC120574213 NA other downstream 79164 14765734 ~ 14790778 (-)
LOC120574989 LOC108241285,LOC103373333,LOC106518659 other downstream 325948 14533682 ~ 14543994 (-)
cenpx cenpx other downstream 340789 14526126 ~ 14529153 (-)
ush1ga LOC104944226,LOC103373181,LOC103392806,LOC106949104,LOC104925058,LOC103140944 other upstream 4995 14879627 ~ 14889482 (-)
LOC120573849 LOC106675063,LOC102783976,LOC102313472,LOC102290019,LOC102295680 other upstream 128381 15003013 ~ 15008712 (-)
LOC120573850 LOC106674513,LOC106098575 other upstream 135166 15009798 ~ 15010340 (-)
LOC120574278 LOC104940298,LOC103361237,LOC102197797,LOC102781856,LOC104946382 other upstream 232125 15106757 ~ 15139853 (-)
metrnla metrnl,LOC102778978 other upstream 568492 15443124 ~ 15449517 (-)

Expression


Co-expression Network