si:ch211-11k18.4 (LOC101474882,LOC102302894)


Basic Information

Item Value
gene id si:ch211-11k18.4
gene name LOC101474882,LOC102302894
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 8651632 ~ 8659219 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825844.1
GCCGCTTTCTAGTTGACAACGTGGCCGTACGTCTCAACCAACCCCGTGTTTCAGCGGACCGGGGCGATTCAAACAAGCCAAACCGGCCGGCTTTTGTTAATAGCTAGTTCAGAGAGTCGTTGAGGATCATCAGCACAGTCTAACAATGTCTGGGAAAATCAAGAGCCGAAGTGCTGCAAACGCAGACGCGATAACCGGCGGTGTGTCCTGCGATGAACGCATCTTGCGGGATTGTCATCAATTGTACACGGATCCCGATAGCGGGTTGATCTCTGTTGCCGAATCTGTCAGTGTGAAGTTGCTGCCGCCCAGAAAAAAGATTACTGTGATGCTGATGGGCAACCACTCTGCTGGAAAAAGCTCCTTCATCAACTGgtATGTTGAAGAGCACATTCAGCGCACTGGAGTGGCTATTGAGACCCAAGGCTTTAACTTTGTTACAAGTGGGCGCAAGAGAGAATCTCTTACAGGAAATGCCACCCTTCACCTATATCCACACTTCAAGCCTCTGCAAGAGTTCAAAGGTGTTTCAGAGTACTTGAGCACAGAGATCTGCACGTCGAGACAGAAGCGGTTCAGCCTGGTGACATTTGTGGATTCGCCAGGCTTGGTGGACGGTGACATGAAGTATCCCTTTGACGTGGACGAGGTTATCATGTGGCTGGGTGACCTCTGTGACCTGATTCTGGTCTTCTTTGACCCAATGGGTCAGGCTCTGTGCAAGCGCACCCTGAACATTGTGGAGAACCTGAATGAGCGACACGGGGATCGACTGCGCTTTTACCTGAGCAAAGCTGACGAGGCCGGGGGCGAGTCGGACAGACAGAGAGTAATGATGCAGATTGTCCAGGAGCTCTGCAAGCGACCGGGACTCAACAAATGCGGTTTTGACATGCCCACCATCTACATTCCTAATCCAAATAAGCCAAGTCGCTGTGTAAACCAGATTGAGGAGGTGTGTCGCGCCATCGAGAAAACCATTAACCAAACGGTCCAGAATACACTCAACTCCCTGGAGAAGGACTGTGAGCTCATCAGCGAGGCCATCACTGATACGCTGAGTAACGACAGGGAGACCAGTTTTAGGAACCGACGGGCGCGCTGTAAGAGCTGCTTGCTGACTCTGCTGGGCTTCAGCGTCCCTCTGGCTCTCATGGCGCTACTGGTGCTGGGCGTTTTGTCCAAGGAGCTGCTGGTGGTGGCTCTGGGCCGCGAGGGCACAGAGACACTCTCACTCTACCTGACTCCCGCAGTGACTATGTTTGAGTCCCTCTCTATGGAGCAGCAGCTTTACGGCTGTGGCGGAATGgtccttctctccttcctcctacTCATCATCGCACGCTTCTCCTTCAGGACTCAACCAACTCTGTCAGGCAAACAGAAAAGGCAACTGCAGGAGAAGCTGGAGTACGTTCAGGAGGTGGTCAAGACCAAAAAgAAAAAGCTGTATGAAGAATACCTTCGCCAGAGTGTCAGCGATCAGGACATGGACTTGTAAAAGACAGATGTACACAATGATTCAGCATCCCCGCACCGACGACACTGGACCGAATGAAATAAAAGCTTTGCCAAGGTTTCACACCAGCCGTCGTGTCAATCTTACCACTTAATGTCGTTGATGTCAAATTATAAGCATATGGTACACACGTAGAAACCCATCCAAGATCTGGTGCTTTGGATACTGTAAAGTCCGTTTACTTCGTAACCACACTACCTGCAgataatttttgtttttgttactgATAAACCTTTGTTACTGATCACATTTGTTGTGAGCatttatatacatgtatattgtGCCTCTGCTTCCACTCAAAGGAATTCAGGCTTCTACCACTTTTAAGATATTTACAAACTATTTATAATATTCCTTTATCTGAGACATTGTAATTTGGTTAAATGGCATATAGCATTGGTATACATGAGTTGCTTTGCATAAGAACTTTCACCAGCATTTTATACAGGACTTTGGCAGCATTTTATACAGGACTTTGGCCGATTGGTGTCTTGAATTTACTCTTTTGGTATTAATCCACTTCACATCATGAATGTTTGTTAGCTAATATGTAGCATATTCAGTTAGCTGCACAACTCTTGTTATTGAAGTAAATGTCCAGCAATCAAACATTTTACCGTTTGACTAGtgacaaaattttttttttgtgttttcctgtTCTACATTGTGACCATGTTTTAATTACAAAGgacttaataaatatattaaaaaca

Function

NR:

description
uncharacterized protein LOC101474882

GO:

id name namespace
GO:0006184 obsolete GTP catabolic process biological_process
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825844.1 True 2232 mRNA 0.47 12 8651632 8659219

Neighbor

gene id symbol gene type direction distance location
rabep2 rabep2 coding downstream 11197 8627083 ~ 8640435 (-)
LOC120573875 LOC104929518,LOC103375462,LOC108242957 coding downstream 131045 8513629 ~ 8520587 (-)
LOC120575363 LOC103375241,LOC104929519,LOC102212394,LOC101477022,LOC102794201,LOC102305637 coding downstream 139792 8506317 ~ 8511840 (-)
recql5 recql5,LOC102306769 coding downstream 146793 8488379 ~ 8504839 (-)
cdr2l LOC100699057 coding downstream 166940 8474480 ~ 8484692 (-)
nudt9 nudt9 coding upstream 1083 8660302 ~ 8665654 (-)
mapk8ip3 mapk8ip3 coding upstream 80412 8739631 ~ 8768700 (-)
jpt2 hn1l coding upstream 113645 8772864 ~ 8778762 (-)
dhrs7b dhrs7b coding upstream 140256 8799475 ~ 8805852 (-)
tmem11 tmem11 coding upstream 148015 8807234 ~ 8810350 (-)
G153143 NA non-coding downstream 4341 8647083 ~ 8647291 (-)
G153142 NA non-coding downstream 6607 8644784 ~ 8645025 (-)
G153130 atp2a1 non-coding downstream 35520 8612277 ~ 8616112 (-)
G153127 atp2a1,LOC102238060,LOC106906942,LOC103469116 non-coding downstream 39635 8551296 ~ 8611997 (-)
G153124 NA non-coding downstream 63444 8540378 ~ 8588188 (-)
G153139 NA non-coding upstream 392 8659611 ~ 8684753 (-)
G153137 NA non-coding upstream 40890 8700109 ~ 8776266 (-)
G153274 NA non-coding upstream 402077 9061296 ~ 9111224 (-)
G153275 NA non-coding upstream 405777 9064996 ~ 9085687 (-)
G153455 NA non-coding upstream 537539 9196758 ~ 9203859 (-)
G152952 NA other downstream 207251 8441179 ~ 8444381 (-)
LOC120574885 LOC103375378,LOC104925605,LOC104966930 other downstream 551234 8082138 ~ 8100398 (-)
grin2aa grin2a,LOC102780805 other downstream 927718 7569718 ~ 7723914 (-)
arhgdig NA other downstream 1850096 6772880 ~ 6801536 (-)
G152567 NA other downstream 1930989 6719784 ~ 6720643 (-)
G153172 mrps34,LOC102799846 other upstream 72178 8731397 ~ 8733019 (-)
natd1 natd1 other upstream 153111 8812330 ~ 8816305 (-)
tufm tufm,LOC106606342,LOC101070424,LOC106606341,LOC106931188,LOC103145412 other upstream 191224 8850443 ~ 8857571 (-)
zgc:55558 p-ras,LOC105029053,LOC104950842,LOC104930345,LOC103392975,LOC101069736,LOC106606379,LOC103023536,LOC108413997 other upstream 236563 8895782 ~ 8907662 (-)
LOC120574599 NA other upstream 528031 9187250 ~ 9204006 (-)

Expression


Co-expression Network