fam117aa (fam117a,LOC102291926,LOC102800024,LOC103357381)


Basic Information

Item Value
gene id fam117aa
gene name fam117a,LOC102291926,LOC102800024,LOC103357381
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 21473165 ~ 21481722 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825859.1
GAGTTGCTCAGGTTGAGCAGAACAGAGCTGTTGGCTGTTGTGTTGTCACTTTGCGTACATGGTGAGCGAGCAGCAGTGTGTGAGAGCAGCGCGTGGTCTCTGCTGGTGTTCTCTTCAGACAGCGACGTGAAGGGTAATATGCGCGATTTATTACGATGCGTTAAACTGCAAAGCTGCACTCCGctcgtctctgctgctcctTCGACCCGAAAGTAAGCAACAAAAATCAtggtcatcatcatcacaaaagAAAGCTCAAGCTGGGTGCCCAAGAAGAGGCCCGATCACAGTTTTGAATCATAACTGTGGGTGAACTGAATGTGGGCAGACAGTAAAGCCAGCGCCGCGCAGAGTTGCAGTGAACGACGGGACGAAGAAAAGCAAATTGCCGTGTGGGTGTTTTCGTAAGCGGAGCTCGGAGTGGGGGATGTCGGGCAGAAGTGGAGGAGCGCCTCGGGGGTGCAGCAACCCCAGCCTGCTGCCCCTCAGAGCCACGGTCCCATACCAGCTCCAGAGGGGCTCCGCTCTCCTCTGCCGGGAGGTCAAGACGGCTGACAGGACCACAGCTCGCCCACCGAAACCCACCATCCGCCGAACTCTTTCTTTGGACGCCATCGTCGGACCCTATCTGCAGGGACAGTGGCCCAAAGAGGCAGAGAGCACGGCTGTTACCTGTGTCAATGACAAAGCCACACAGactCCAAGTTCCTGGGCAGAGGAGACCCGAGGGAGGAAAAGTGCCGGCAAACACAAGCGCTCAGCATCGTGGGGCAGTGCAGAGCACCTGAGGGAGGTGGCCAAGCTGAGGAACCAGTTGCAGAAGCGCTCCCGCCACGTCCCTCCCTCAGCAGGATATGAGCTCCCCCACAACCCCCTGCCAGCAGGTCATGCAGCAGGCATAACTCAGACACTGCCCCTGATACCCCTGAACAGACTCGCTCCACGACTGCGACGTAGTGTTGAAGGCCTCAACTTGGAGCTGGAAGAGGTGTTTGTTTCTGAGAAACCTGAGGAGCTGCACGAGATTCTGGATATCCCAGATGGTCACAGGGCCCCTGTCCCTGTCCAGAGATGCAGCAGTGGCTCTCATAGTGAGCCCTCCCCTGGCCCCCTGGATCTGGatccttccctcctctctccttctcagtCCCCCTGTCCTTTAGATCCATCGCTTGTGTCTCCTTCAAATTCCCCTTCTCCATTGAACCCATCTCTTCTGTCTCCGTCACTGTCTCCCTGTCCCATTGGAGAGCCAGAGCCAGTGGACTGTGAGACGCTGTGTCCTGCTCCGTCCACATCACTCCCTTCATTTGCACTGGACCATCCTCTGTTGCAGCCCTGCTCCTCCGCTCCTTGGCCAAACAAAACTCACGGCTTCCAGCGCGAGCCGCCAGAAGGCTGCGAGCGAGTACGAGTGTGCGAGGAGGCGTTCTCCAGGGCTGCCTGTCAGGATAAGCCTCTCCTTCAGCCATCCTGCCCTGACCCCAACAAGGTCAACTTTACCCCCCATGGAGGCTCCGCTTTCTGCCCTGTCAGTCTTCTAAAGCCCCTCCTGCCCTCCATGGACCTCCTCTTCCGTGGGCTGTCAGTCTCTCCGGTCACCGGCTGCCCAGGTCAGGCCTCTCCTACCAGGCACCTGGGCATGCAGTAGGTGGATATCTGAGCAGAGCATCATCTCAGGGCTAAACCACACTGCACTGCCAGAACCTGCAGAAACTGGATTTGTTTTACAGATACACCTGGCTCATCACTGCTGTAACGTGCCATGATCACTGTGATCAAAACAAGAGACTGTGATTTATACTTCAGATTAACTTTAACTAAAATCTGGCTGTTTTACTGATTATTTCCACCTGCAGGATGCTTTGTTTAAGCTGATATTTACCTCATCCGTACTTAGTATTCCCCATGTGAGCTGTAGATTAACTACAGGACtggaaatgtgtttgtttttttatggctgACAAAGTTTTTGATAAAACTTAatattgttttagttgtgcatcAGCAGTTCAAACAAAGACTGCAGTCTGCTGGggatgttttcattttaaatttaaaataagtGAATTCagagtaaaaagaaaagcaagcaCCTACAACATCCAAGTATTACTTTCTTACTATCCTTGACTGTTTATTAAAGAATTGTTAAGTTTAGATGAACTTTCAGCTTAATTTGAGAAACAAACTTGATGGGTTTGTTCCTGAAATTTCAGAAAATCTGTTTGTTTGAAGAGACATATTTTTTGGCCCATAGTTTAATGGTGGCCTgcttttctacaaatgtatttctaagaagatatatatttttgtatctttttaaGGAGTTATGAGGCTGGTGATACTGTTGTTGTATTCACTGAAAGAAATTGCCTTCTGTTTATACTTTGTTTTATAAGCAGGAATGGATGTTTTATTAGCTTTACTTGCCTAAGGGGGGCATTGTTCTAATCAAATGTTTGCAATTTTGTCAACTTTTTAAGAATTTGAGTGGGTCAAGCTgagtttaaaaaggtttttctttGGACCACGTGGTTCTGGTCAGAAATGGATGTGGAAGAGGTTGATTCTATCTGCTCGAGTTCATGTTCAAATGGATAACACACTGTCTTTGTCAGCATGATCCTATGCAACACTCATAAAAAAGCATACCTATAGTTGAAaaaataggtttttttttttgtcagaccTGTTTTGTCAGACCTGATTATGCACCCTTTTATTGTTTAGTGTGCTGTTGTTGGCATTGTGAAGAAAGTAAAATAACGAGATGTTCTGGCGTTTAAAAACCTTCTGTACTCCTTATCA
>XM_039825860.1
ACCACAGCTCGCCCACCGAAACCCACCATCCGCCGAACTCTTTCTTTGGACGCCATCGTCGGACCCTATCTGCAGGGACAGTGGCCCAAAGAGGCAGAGAGCACGGCTGTTACCTGTGTCAATGACAAAGCCACACAGGATTTCTATAGAGGACAAGATATCTGACGTTGGCTCTGCAGGTGTCTGGTGGTTCCAGTTCGACGCTGAGGATGGAAGGCAGCCAACTGGAAATAGTCgtttttgttcttctttaaATTCTGCTGTTCTTCCCTCGCTCCCCCCCGCAACTGTATCTGCTCCTAACTAGTGCACAAAGCCCCGACTAACATTACCAAGCTCCGCAGCTTCGTCTTCGTCTCCTGACACAATTTAAACTCGAGCGAACCCCCTTTGCTTCCATTGTGAGGAACAGACCCCTTCTGACCTCATTATACAGACACCCCATCCCCCAGCACTCTcctcaaccacacacacacacagacacacacacacatgcacaccaacACCACCCTACCCAGCACCTCCTTGCCATAGTAATGCCATAGTTCTTCTGCATTACTTTCATTCTTCATTAGGCATGTTACTGCACCTTCAATTTTCCTGCACATTGTACAAAAAAATCTCAGATGTGGATTtatatttaatgaatattttaaagttattcTATCATAGTCAGTTAGTCAGTCAgttagtttttatttctttgtcatGCCAACAGTGGTCAAccccacatgggattacaagacaccactaTTTATCAAACACACATCTTCCATTAACATTTATacaaaatcaaaagaaaaaatcaATATACTTTCAAATAACATATTTATGTGCAAGATTTCTAATAAATTGTACACGGAATAACCCTTATAAATGTAGTTAACCCTTTTAAACTATGCTGTAATTCGACAGCTTTGTGCTACAGAtgtgcatatgtatgtgtgcgGGCAACCTTTAATACAACACCACTGTTTAATGCTAATATTAATCAATAAATTCGTAGATTGAAAGAAAATAATTGCCAAGAATTTGAATAACCCAAGTAGATGTACTGTATAAggcatttatcaagcaaaaatgctaaaTATTATCTACCAGCAGCCTTCCAaatgtgtgctttttttctaatttatataattttaagttgaatatcatttggttttggactgttgattAGCTAAACAAGCAATATGATTTGACATTTTGCAAACTGATTAATTGTTATTCAAAATAATCCTGTTCCTATTGTTGTGGCCATATTGCTAACAGGAATTAAGTATACATGAATGAGTTGTCAAAGCTAGAAACACTGGCCAGACCAAATGTTCTGCTACCTTGAGTCTTTTTATAGGTTTGTGTCCCATGATCCCCATGTTCATGTTTTGGGCAGGGTGGGGTTGTTGGTGTTGGATGATTGGGGGGGTTGGCAGCTGTAACTCTACACCGATGTCACTGTATGACGACTCATGCCGCGTTCTAACTTATTTAGCCAGGCGATGCATTACGTCCGCTGAACAGGACAAGATGGTGTCAGTGTTTTCCTGCAGGCAGTTATGGCACCATTATTTCTCTGAGCTTTGAGGCTGACACCTAAATAACAGGTTGTATTTTGGGGACAGAAAACCATGACAGAGCCCTACTGCAGACAGTGAGAGCTGAATGTGTAATGCTAGCTGTCTTATGAATGGCATGGACACCAGTGAGTGGATCATTGTCTGCAGCTGTGTGAAGCAGTTGACTGGAGGCACCAGAACTGTGAGTATCTGATCCTGTGGCTCAACTCAGCCTGGGTTTCACCTGGTGATGATGAACTGCCAGTCGTCTGCTCCCAGCCAACAGCCGGGAGCGGTCAACCAGACTCCCTCTGGTAGAAAATCAAGAGTCAATGTGAAGAAATCGactCCAAGTTCCTGGGCAGAGGAGACCCGAGGGAGGAAAAGTGCCGGCAAACACAAGCGCTCAGCATCGTGGGGCAGTGCAGAGCACCTGAGGGAGGTGGCCAAGCTGAGGAACCAGTTGCAGAAGCGCTCCCGCCACGTCCCTCCCTCAGCAGGATATGAGCTCCCCCACAACCCCCTGCCAGCAGGTCATGCAGCAGGCATAACTCAGACACTGCCCCTGATACCCCTGAACAGACTCGCTCCACGACTGCGACGTAGTGTTGAAGGCCTCAACTTGGAGCTGGAAGAGGTGTTTGTTTCTGAGAAACCTGAGGAGCTGCACGAGATTCTGGATATCCCAGATGGTCACAGGGCCCCTGTCCCTGTCCAGAGATGCAGCAGTGGCTCTCATAGTGAGCCCTCCCCTGGCCCCCTGGATCTGGatccttccctcctctctccttctcagtCCCCCTGTCCTTTAGATCCATCGCTTGTGTCTCCTTCAAATTCCCCTTCTCCATTGAACCCATCTCTTCTGTCTCCGTCACTGTCTCCCTGTCCCATTGGAGAGCCAGAGCCAGTGGACTGTGAGACGCTGTGTCCTGCTCCGTCCACATCACTCCCTTCATTTGCACTGGACCATCCTCTGTTGCAGCCCTGCTCCTCCGCTCCTTGGCCAAACAAAACTCACGGCTTCCAGCGCGAGCCGCCAGAAGGCTGCGAGCGAGTACGAGTGTGCGAGGAGGCGTTCTCCAGGGCTGCCTGTCAGGATAAGCCTCTCCTTCAGCCATCCTGCCCTGACCCCAACAAGGTCAACTTTACCCCCCATGGAGGCTCCGCTTTCTGCCCTGTCAGTCTTCTAAAGCCCCTCCTGCCCTCCATGGACCTCCTCTTCCGTGGGCTGTCAGTCTCTCCGGTCACCGGCTGCCCAGGTCAGGCCTCTCCTACCAGGCACCTGGGCATGCAGTAGGTGGATATCTGAGCAGAGCATCATCTCAGGGCTAAACCACACTGCACTGCCAGAACCTGCAGAAACTGGATTTGTTTTACAGATACACCTGGCTCATCACTGCTGTAACGTGCCATGATCACTGTGATCAAAACAAGAGACTGTGATTTATACTTCAGATTAACTTTAACTAAAATCTGGCTGTTTTACTGATTATTTCCACCTGCAGGATGCTTTGTTTAAGCTGATATTTACCTCATCCGTACTTAGTATTCCCCATGTGAGCTGTAGATTAACTACAGGACtggaaatgtgtttgtttttttatggctgACAAAGTTTTTGATAAAACTTAatattgttttagttgtgcatcAGCAGTTCAAACAAAGACTGCAGTCTGCTGGggatgttttcattttaaatttaaaataagtGAATTCagagtaaaaagaaaagcaagcaCCTACAACATCCAAGTATTACTTTCTTACTATCCTTGACTGTTTATTAAAGAATTGTTAAGTTTAGATGAACTTTCAGCTTAATTTGAGAAACAAACTTGATGGGTTTGTTCCTGAAATTTCAGAAAATCTGTTTGTTTGAAGAGACATATTTTTTGGCCCATAGTTTAATGGTGGCCTgcttttctacaaatgtatttctaagaagatatatatttttgtatctttttaaGGAGTTATGAGGCTGGTGATACTGTTGTTGTATTCACTGAAAGAAATTGCCTTCTGTTTATACTTTGTTTTATAAGCAGGAATGGATGTTTTATTAGCTTTACTTGCCTAAGGGGGGCATTGTTCTAATCAAATGTTTGCAATTTTGTCAACTTTTTAAGAATTTGAGTGGGTCAAGCTgagtttaaaaaggtttttctttGGACCACGTGGTTCTGGTCAGAAATGGATGTGGAAGAGGTTGATTCTATCTGCTCGAGTTCATGTTCAAATGGATAACACACTGTCTTTGTCAGCATGATCCTATGCAACACTCATAAAAAAGCATACCTATAGTTGAAaaaataggtttttttttttgtcagaccTGTTTTGTCAGACCTGATTATGCACCCTTTTATTGTTTAGTGTGCTGTTGTTGGCATTGTGAAGAAAGTAAAATAACGAGATGTTCTGGCGTTTAAAAACCTTCTGTACTCCTTATCA

Function

symbol description
fam117a Orthologous to human FAM117A (family with sequence similarity 117 member A).

NR:

description
PREDICTED: protein FAM117A isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825859.1 False 2811 mRNA 0.49 8 21473165 21481722
XM_039825860.1 True 4016 mRNA 0.44 8 21473165 21479847

Neighbor

gene id symbol gene type direction distance location
slc35b1 slc35b1 coding downstream 915 21465792 ~ 21472250 (-)
slc4a1a slc4a1 coding downstream 373198 21086540 ~ 21099967 (-)
ubtf ubtf coding downstream 387950 21074583 ~ 21085215 (-)
hrob NA coding downstream 422558 21038105 ~ 21050607 (-)
asic2 asic2,LOC102794937 coding downstream 441286 20617463 ~ 21031879 (-)
rundc3aa LOC103357380,LOC101465462,LOC104930217,LOC100703962,LOC102776052,LOC102192765 coding upstream 1223 21482945 ~ 21498768 (-)
strada strada coding upstream 19477 21501199 ~ 21513401 (-)
trnac-gca_31 NA coding upstream 122643 21604365 ~ 21604436 (-)
dcaf7 dcaf7,LOC100702343,LOC105030232,LOC105898766 coding upstream 128954 21610676 ~ 21615103 (-)
mylpfa mylpf,LOC107378514 coding upstream 199150 21680872 ~ 21685688 (-)
G156985 NA non-coding downstream 10485 21461520 ~ 21462680 (-)
G156934 NA non-coding downstream 146764 21326114 ~ 21326401 (-)
G156932 NA non-coding downstream 148670 21324237 ~ 21324495 (-)
LOC120575152 NA non-coding downstream 219601 21170204 ~ 21253564 (-)
G156825 NA non-coding downstream 399880 21071874 ~ 21073285 (-)
G157065 NA non-coding upstream 153067 21634789 ~ 21635593 (-)
G157075 hsd3b7 non-coding upstream 183728 21665450 ~ 21667398 (-)
G157081 cd2bp2 non-coding upstream 213209 21694931 ~ 21698789 (-)
G157092 NA non-coding upstream 245473 21727195 ~ 21729411 (-)
G157135 NA non-coding upstream 339900 21821622 ~ 21831111 (-)
ndufa4a LOC101066870,LOC103357383,LOC101155111,LOC107378524 other downstream 8088 21463207 ~ 21465077 (-)
LOC120575154 spop,LOC102792310 other downstream 80418 21333409 ~ 21392747 (-)
selenow2a LOC102798572 other downstream 364372 21105860 ~ 21108793 (-)
atxn7l3a atxn7l3 other downstream 401658 21064760 ~ 21071507 (-)
hexim1 LOC104946860 other downstream 1172219 20299024 ~ 20300946 (-)
G157034 NA other upstream 139308 21621030 ~ 21622961 (-)
LOC120574354 NA other upstream 233292 21715014 ~ 21718729 (-)
G157096 LOC102782282,LOC100692966,LOC103367351,LOC107084765,LOC104927186,LOC102201015 other upstream 252660 21734382 ~ 21740703 (-)
LOC120575106 LOC103367329,LOC107658449,LOC107564019,LOC107674165,LOC104934486 other upstream 273019 21754741 ~ 21756191 (-)
G157147 cdhr2 other upstream 367373 21849095 ~ 21856016 (-)

Expression


Co-expression Network