pycr1a (LOC103373386,LOC104918329,LOC106533854)


Basic Information

Item Value
gene id pycr1a
gene name LOC103373386,LOC104918329,LOC106533854
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 14472095 ~ 14475790 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039826079.1
TGGTCAAACGTAGGCTACGTGTTGCCCCAAACATGCAAGCATTCTCGCTTGTCAGTTAAATGTATCTCCACAGGTACAGTATGGCTACAGCGCGAGATATCCGGGCCACGTCAAAAGTGCTGTAATTCCAGGTGTCTAAACGGTTGCTGGTTCGGTCAGTCGGTCAGCTTATAAGGGCTCTTCAGTTTATTCGTAGAATGAGTGTGGGTTTCATAGGAGCAGGCCAGGTGGCCCACGCTCTGGCAAGAGGCTTCATAGCTGCAGGTGTGATTGCCACCCACAGAATCACAGCCAGTTCCCCAGGCACAGATCGACCCACAGTACAGGGACTGCGGAAATTGGGTGTCAATTTCACCACCAGCAACAAAGAAACAGTGAGCAAAAGTGATGTTCTCTTCCTGACTGTGAAGCCCCACATCATCCCTTTTGTACTGGATGAGATTGGACCAGACATCGAAGATCGTCACCTCATTGTGTCCTGTGCTGCAGGAGTCACCATCAGCTCTATAGAGAAGAAGCTGCAGCAGTATCGTGCTGATCCAAAGGTAATGCGGTGCATGACAAACACTCCAGTTGTGGTGCGCGAGGGGGCTACTGTGTACGCCACAGGCACCTATGCAGAAGTGGAGGATGGAAAGCTTCTGGAGCAGCTGATGGCCAGTGTAGGATACTGCACTGAGGTGGAAGAGGACCTGATTGATGCCGTCACCGGCCTCAGCGGCAGTGGTCCTGCTTACGCGTTTACAGCTGTAGACGCTCTTGCGGATGGTGGAGTGAAAATGGGCCTTCCCAGGAGATTGGCTATACGCCTCGGAGCCCAAGCCCTGCTGGGGGCTGCTAAAATGCTGTTAGACTCAGACCAACACCCTGGGCAGCTCAAGGACAATGTGTGTTCACCAGGGGGCGCCACCATCCACGCCCTGCATGTCATGGAGAGTGGTGGCTTCCGCAGTCTCCTCATCAATGCTGTAGAGGCCTCCTGTGTTAGGACTAGGGAACTTCAGTTTTTGGCCGACCAAGAGAAAATCTCCCCAGCTGCCATAAAGAAGACAACTCTGAACAAAGTGTTGCAGCAGCCAGGAGTGACTGCAGAGGGTGTTGGAGTCAGATCTCATGGGATCAGTATGTTCAACAGCAGTGACCCCAGGACCAAGAAGAAGTAAtcattttaatgtgtgtaacaaTAAATATTCCATATATGCTGTGAATAAACCACTACTGGCAGATGAATGTTGGAACATA

Function

NR:

description
PREDICTED: pyrroline-5-carboxylate reductase 1, mitochondrial-like

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0055129 L-proline biosynthetic process biological_process
GO:0004735 pyrroline-5-carboxylate reductase activity molecular_function

KEGG:

id description
K00286 proC; pyrroline-5-carboxylate reductase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039826079.1 True 1242 mRNA 0.51 8 14472095 14475790

Neighbor

gene id symbol gene type direction distance location
LOC120575491 pcyt2,LOC103373415,LOC101487187 coding downstream 20440 14441803 ~ 14451655 (-)
LOC120575370 LOC104945235 coding downstream 32984 14430021 ~ 14439111 (-)
LOC120575368 NA coding downstream 44777 14419362 ~ 14427318 (-)
rnf213a rnf213 coding downstream 54954 14384102 ~ 14417141 (-)
LOC120575134 NA coding downstream 183276 14285174 ~ 14288819 (-)
LOC120575481 myadml2,LOC103373375 coding upstream 1044 14476834 ~ 14479374 (-)
notum1a notum,LOC104918326 coding upstream 5547 14481337 ~ 14488923 (-)
LOC120575183 NA coding upstream 53648 14529438 ~ 14532650 (-)
LOC120575160 tmem235,LOC104962294,LOC100710065,LOC101469204 coding upstream 242203 14717993 ~ 14730049 (-)
fscn2a LOC104925063,LOC104962304,LOC103373227,LOC101170272 coding upstream 264747 14740537 ~ 14748030 (-)
LOC120575037 NA non-coding downstream 135021 14330945 ~ 14337074 (-)
G154825 NA non-coding downstream 145159 14325973 ~ 14326936 (-)
G154788 NA non-coding downstream 372814 14078514 ~ 14099281 (-)
G154791 LOC100698953,LOC106518679,LOC103373486 non-coding downstream 384329 14085742 ~ 14087766 (-)
LOC120575453 NA non-coding downstream 525698 13936768 ~ 13946397 (-)
G154948 LOC104962285,LOC104925065 non-coding upstream 151960 14627750 ~ 14664671 (-)
G154952 cyth1,LOC103140955,LOC102194078 non-coding upstream 157388 14633178 ~ 14636802 (-)
G154953 cyth1,LOC103392816,LOC101076412 non-coding upstream 164312 14640102 ~ 14647069 (-)
G155025 NA non-coding upstream 419589 14895379 ~ 14895624 (-)
G155039 NA non-coding upstream 487443 14963233 ~ 14963846 (-)
LOC120574967 mafg,LOC104918330,LOC108241257,LOC103373400,LOC101487863,LOC106533856 other downstream 665 14454837 ~ 14471430 (-)
med9 med9 other downstream 414741 14050738 ~ 14057354 (-)
tfap4 tfap4 other downstream 840259 13589483 ~ 13631836 (-)
prkar1b prkar1b,LOC107661853,LOC107653458 other downstream 1050144 13335449 ~ 13421951 (-)
sun1 sun1,LOC104947709,LOC102193096,LOC103360714 other downstream 1459314 12973260 ~ 13012781 (-)
cenpx cenpx other upstream 50336 14526126 ~ 14529153 (-)
LOC120574989 LOC108241285,LOC103373333,LOC106518659 other upstream 57892 14533682 ~ 14543994 (-)
LOC120574213 NA other upstream 289944 14765734 ~ 14790778 (-)
LOC120574214 bahcc1,LOC106528540,LOC108241329,LOC107083174 other upstream 319856 14795646 ~ 14828239 (-)
LOC120575102 fam104b,LOC103373210,LOC101470236,LOC107083185,LOC102083140 other upstream 376149 14851939 ~ 14857580 (-)

Expression


Co-expression Network