LOC120575363 (LOC103375241,LOC104929519,LOC102212394,LOC101477022,LOC102794201,LOC102305637)


Basic Information

Item Value
gene id LOC120575363
gene name LOC103375241,LOC104929519,LOC102212394,LOC101477022,LOC102794201,LOC102305637
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 8506317 ~ 8511840 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039826095.1
AGAAAACCGAACGTGCTCGAGCAGCCGACTGTCAGTCTGGCATGTAAACAAGGTCAGACACTGCAGCACAAAGCCTATAACGCTTCCTCCAGTCACGGGCGGCTGCTCGCTCTTAAggcaagagaagaagaaaacttATTTACCAGAGGACGAAGGATTCTTATTACAGACCAGCCAAGATGATGCAGTGTTTTCACTTCATGGTGGAGCCGGCCAAAAACCTTACCGCCAAGATAAAGGAATCGCATAAGAGAGCGAAGAATGAGAAGAGGGAGCCTTTGGATGAGGATCAGCTGTTTATTGTGGATCTGGCTCGAGATCTAAGCCGAGTGTGCCAGCGGTCAGCAGTCCTGGAGAACATCTGGAACCTTGATGACATCTGGCCAGCCTCTCTCTGCAGGGTCTTCATTCTACAGTGGGCCTCCATGTTAGAGAGCAAGAAGAGGCCCTTGCAGACAGATGGCTGGCCAGAGATGGACGAGGTCAAACAGCCTGATATGATTAATGAGCAGGACGTGCTGCAGGCCAAAACTGTGATCCTCAACTGGATCAAGGACCTGAGAGCTCAGCCTGAGCAAAGTGTGTGGCCTGGGGAACCTGTTGCAAAGGCTCTGGAGGACCTGCAGTCAGCCTGGCGCTGGGGGCGCGCGCCCAATCTGCTGACGGCTATGGAGCTGGTTTTTTGGACTTTAATCGTGCAGCGCCCAGATAAGGATACCATTCCGCAGCAGTGGCTCATGTGGAAGCAGAGGACTCAAAAGATTGGTGCCATATCCTACATTCCTCAACCAGTGTGGGATTGGATCTCAGATGCTTCAGTGGAGGTCACTCTGGATCTGGACACCGCCAACCCTGATCTGCTCATCACTGACGAGAAGAGGATGCGCTGTGGCTTTGAGCGGAAGGATGTTCCCAACTACCACCAACGCTTCGACGGCTGGTGGTGTGCTGTCGGGATTGAGGGCTTCAGCTCGGGCCGCCACTACTGGGAGGTGGACGTGGGAGAGCGGGACTGGAGGCTGGGCGTGGCCAAAGAATCGGCCCTGAGGAAAGGCTTCAAGTCCCTGAACACAGACACGGGTTACCTGAGCCTGCGGCTGGAGAGGGGCACTGAGCTGAAGGCACTGACGGTGCCATTCACAGCCCTGCCGGCCGGCCTCATCCCCCGCAAGGTGGGCATCTACCTCGACTACGACCGCGGCCAGCTGTCCTTCTATGACGTGGACAAACACTTCCACATTTACACCTACAACGAGAGCTTCGGTGAGAAGCTTTTCCCCTTGTTTGGGACAGTGGAGATCGGCAAGGATCTGGTGATCAAGTCTCCAGCGGCTAAGACCCAATGTCTCTGCCCCACTCCCTGCCTCTGGGGTTGagcttcctcctctcccctcttccTTTAAAAGCCAGTAGATATCATAATAATGTATTCCAAATGGTTATATGAAAGGAATCAGAGATCCTGATCATTGTGCTATTGAATAGCTCCACTATGTGACCACCCtctatgctgctgctgctgctgctgctttaatGTGATCGTTGCAACCACTTCCTCACTATAGAGTTACAGCGCTACTCATTGCTCACACACATAATGTATTTTCATATATTTGAAAGGAAACCTATAGTAATAATGTAGTGTATTGTGCAATATTAACCCTGCAGTAAGAATGCATTTCTGTGAATGATAAATAAACCAAATCCATGTCTTA

Function

NR:

description
PREDICTED: butyrophilin subfamily 3 member A3-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039826095.1 True 1715 mRNA 0.52 10 8506317 8511840

Neighbor

gene id symbol gene type direction distance location
recql5 recql5,LOC102306769 coding downstream 1478 8488379 ~ 8504839 (-)
cdr2l LOC100699057 coding downstream 21625 8474480 ~ 8484692 (-)
nptx1l LOC103375324,LOC104929529,LOC100699861 coding downstream 204046 8297738 ~ 8302271 (-)
LOC120573855 NA coding downstream 364484 8137584 ~ 8141833 (-)
rasd4 LOC100700404,LOC101481289,LOC104966932,LOC102192661,LOC102311216,LOC102790915 coding downstream 390318 8114974 ~ 8115999 (-)
LOC120573875 LOC104929518,LOC103375462,LOC108242957 coding upstream 1789 8513629 ~ 8520587 (-)
rabep2 rabep2 coding upstream 115243 8627083 ~ 8640435 (-)
si:ch211-11k18.4 LOC101474882,LOC102302894 coding upstream 139792 8651632 ~ 8659219 (-)
nudt9 nudt9 coding upstream 148462 8660302 ~ 8665654 (-)
mapk8ip3 mapk8ip3 coding upstream 227791 8739631 ~ 8768700 (-)
G153112 NA non-coding downstream 36024 8468304 ~ 8470293 (-)
G153106 NA non-coding downstream 51649 8450022 ~ 8454668 (-)
G152925 NA non-coding downstream 213060 8293038 ~ 8293257 (-)
G152924 NA non-coding downstream 214102 8291900 ~ 8292215 (-)
G152863 NA non-coding downstream 414048 8087926 ~ 8092269 (-)
G153124 NA non-coding upstream 28538 8540378 ~ 8588188 (-)
G153127 atp2a1,LOC102238060,LOC106906942,LOC103469116 non-coding upstream 39456 8551296 ~ 8611997 (-)
G153130 atp2a1 non-coding upstream 100437 8612277 ~ 8616112 (-)
G153142 NA non-coding upstream 132944 8644784 ~ 8645025 (-)
G153143 NA non-coding upstream 135243 8647083 ~ 8647291 (-)
G152952 NA other downstream 61936 8441179 ~ 8444381 (-)
LOC120574885 LOC103375378,LOC104925605,LOC104966930 other downstream 405919 8082138 ~ 8100398 (-)
grin2aa grin2a,LOC102780805 other downstream 782403 7569718 ~ 7723914 (-)
arhgdig NA other downstream 1704781 6772880 ~ 6801536 (-)
G152567 NA other downstream 1785674 6719784 ~ 6720643 (-)
G153172 mrps34,LOC102799846 other upstream 219557 8731397 ~ 8733019 (-)
natd1 natd1 other upstream 300490 8812330 ~ 8816305 (-)
tufm tufm,LOC106606342,LOC101070424,LOC106606341,LOC106931188,LOC103145412 other upstream 338603 8850443 ~ 8857571 (-)
zgc:55558 p-ras,LOC105029053,LOC104950842,LOC104930345,LOC103392975,LOC101069736,LOC106606379,LOC103023536,LOC108413997 other upstream 383942 8895782 ~ 8907662 (-)
LOC120574599 NA other upstream 675410 9187250 ~ 9204006 (-)

Expression


Co-expression Network