LOC120575370 (LOC104945235)


Basic Information

Item Value
gene id LOC120575370
gene name LOC104945235
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 14430021 ~ 14439111 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039826115.1
CGTGCGCCCAATTAAGCTAATTAAGTCTTCCGTTTGTTGCTAACTCTGTTAGCCGTTCAAGCTGTGAGTCGAGCGACGCCGGTGTGTAGAGCGAAAGCAGAGAGATGTTTTGCTGTCTTGGTATAGGCCTACTGCCAGCCCCACTGCAGATCTGCATGGGAATGTGCCCTCACCAGGATATCACAGATGAGGGTAAAAAGGCTAAACTCCAGAGCTCTAAAATAGAGCAAGACCTTTGTGAACATGCCCAGACTGAGATCAATGTGGTAAAAATCCTCATGCTTGgaaCTGCAGAGAGTGGAAAGAGCACCCTAATCAAACAGATTAAGATAATCCACAGTCACGGCTTCTCCAAACAGGAGCTCATAAGTTTTAAGCATGCAGTACTAGACAACCTGCTGACCTCCATGAAGTTTGTTCTTCAAGGAATGGGGATGCTGAGGATTAATCTTGCTAACAAGAAGAACAAGATGCATGCCCACTCCATCCTGTCCTGCAGTCAGTGTTTGGGGGAAGACCAGGAGCTGCTTCCTTTCGTGGCTCATGCAATCTGTGCACTTTGGGCCGACCAAGGGGTGCAAGCAGCTGCAGCCAGAGGTTACGAGTTTGAGCTCAATGACTCTGCACTCTATTTCTTTGAGAACATGAGTAGAATCATCGCTCCCAAATACGTTCCCACTGTGATGGATGTTCTGAGAGTCAGAGTGAGGACCTGTGGAATCATTGAGACACAGTTTCAACTTAATGAAATGATCTTTCGgtTGTATGACGTCGGGGGCCAGCGGAGTGTGAGGAGGAAGTGGCTCAGCTGCTTTGACTGTATTCAGGCTGTGTTGTATGTCGTGGCCCTGAGCAGCTATGATATGACACAGACGGACAAAACCTCAGGGAATCGGCTGCAGGAAAGTCTTGAACTTTTTACATCCATCTGCACCAACACAGTCTTTAGCAGCACCTCACTGATTCTATTTATGAACAAAACGGACCTTTTCCGGGACAAGATCCTACACTCTCGAAGACACTTGAGATTTTACCTTTCTAGTTACAAAGGCGCAGATGTTGATGTGGACGCTGCAGCCCACCACATAACTGCCATGTTCTCCTCACGTAACAGCAGTCCTGACAAGCTAGTGTACCACCACTTCACCACGGCCACAGACACCACGAACGTACAAGTGGTCTTTCACATGGTCATAGAGCAGGTTATGAAGGAGAACCTAGCAGCTGTCCAGCTGCTGTAAAAGTCACCTGAAGGCTGTAAGATGAGGGTTTATTTATTCAGTGCTGGTATCTTTATTTCATTGGTTGTTTTCCTGTGTGCAAATCATGTATTTAAGCAGCGAATGTTAATATGATAAGGCTGCACTTtacccatttattttaaaaccttttttaaataaaatatttattgatACACTTGGTC
>XM_039826116.1
CACGTGCGCCCAATTAAGCTAATTAAGTCTTCCGTTTGTTGCTAACTCTGTTAGCCGTTCAAGCTGTGAGTCGAGCGACGCCGGTGTGTAGAGCGAAAGCAGAGAGATGTTTTGCTGTCTTGGTATAGGCCTACTGCCAGCCCCACTGCAGGATATCACAGATGAGGGTAAAAAGGCTAAACTCCAGAGCTCTAAAATAGAGCAAGACCTTTGTGAACATGCCCAGACTGAGATCAATGTGGTAAAAATCCTCATGCTTGgaaCTGCAGAGAGTGGAAAGAGCACCCTAATCAAACAGATTAAGATAATCCACAGTCACGGCTTCTCCAAACAGGAGCTCATAAGTTTTAAGCATGCAGTACTAGACAACCTGCTGACCTCCATGAAGTTTGTTCTTCAAGGAATGGGGATGCTGAGGATTAATCTTGCTAACAAGAAGAACAAGATGCATGCCCACTCCATCCTGTCCTGCAGTCAGTGTTTGGGGGAAGACCAGGAGCTGCTTCCTTTCGTGGCTCATGCAATCTGTGCACTTTGGGCCGACCAAGGGGTGCAAGCAGCTGCAGCCAGAGGTTACGAGTTTGAGCTCAATGACTCTGCACTCTATTTCTTTGAGAACATGAGTAGAATCATCGCTCCCAAATACGTTCCCACTGTGATGGATGTTCTGAGAGTCAGAGTGAGGACCTGTGGAATCATTGAGACACAGTTTCAACTTAATGAAATGATCTTTCGgtTGTATGACGTCGGGGGCCAGCGGAGTGTGAGGAGGAAGTGGCTCAGCTGCTTTGACTGTATTCAGGCTGTGTTGTATGTCGTGGCCCTGAGCAGCTATGATATGACACAGACGGACAAAACCTCAGGGAATCGGCTGCAGGAAAGTCTTGAACTTTTTACATCCATCTGCACCAACACAGTCTTTAGCAGCACCTCACTGATTCTATTTATGAACAAAACGGACCTTTTCCGGGACAAGATCCTACACTCTCGAAGACACTTGAGATTTTACCTTTCTAGTTACAAAGGCGCAGATGTTGATGTGGACGCTGCAGCCCACCACATAACTGCCATGTTCTCCTCACGTAACAGCAGTCCTGACAAGCTAGTGTACCACCACTTCACCACGGCCACAGACACCACGAACGTACAAGTGGTCTTTCACATGGTCATAGAGCAGGTTATGAAGGAGAACCTAGCAGCTGTCCAGCTGCTGTAAAAGTCACCTGAAGGCTGTAAGATGAGGGTTTATTTATTCAGTGCTGGTATCTTTATTTCATTGGTTGTTTTCCTGTGTGCAAATCATGTATTTAAGCAGCGAATGTTAATATGATAAGGCTGCACTTtacccatttattttaaaaccttttttaaataaaatatttattgatACACTTGGTC
>XM_039826117.1
TAACCGAAGTGTGAGAGGCGCATATCCTCGTTGACTCTTGGTCAACAAAGTTGTGCTTAAAAATATGCAAGATTTTGTCGTCTTTCAGTCTAAATAGATTTAGATCTGCATGGGAATGTGCCCTCACCAGGATATCACAGATGAGGGTAAAAAGGCTAAACTCCAGAGCTCTAAAATAGAGCAAGACCTTTGTGAACATGCCCAGACTGAGATCAATGTGGTAAAAATCCTCATGCTTGgaaCTGCAGAGAGTGGAAAGAGCACCCTAATCAAACAGATTAAGATAATCCACAGTCACGGCTTCTCCAAACAGGAGCTCATAAGTTTTAAGCATGCAGTACTAGACAACCTGCTGACCTCCATGAAGTTTGTTCTTCAAGGAATGGGGATGCTGAGGATTAATCTTGCTAACAAGAAGAACAAGATGCATGCCCACTCCATCCTGTCCTGCAGTCAGTGTTTGGGGGAAGACCAGGAGCTGCTTCCTTTCGTGGCTCATGCAATCTGTGCACTTTGGGCCGACCAAGGGGTGCAAGCAGCTGCAGCCAGAGGTTACGAGTTTGAGCTCAATGACTCTGCACTCTATTTCTTTGAGAACATGAGTAGAATCATCGCTCCCAAATACGTTCCCACTGTGATGGATGTTCTGAGAGTCAGAGTGAGGACCTGTGGAATCATTGAGACACAGTTTCAACTTAATGAAATGATCTTTCGgtTGTATGACGTCGGGGGCCAGCGGAGTGTGAGGAGGAAGTGGCTCAGCTGCTTTGACTGTATTCAGGCTGTGTTGTATGTCGTGGCCCTGAGCAGCTATGATATGACACAGACGGACAAAACCTCAGGGAATCGGCTGCAGGAAAGTCTTGAACTTTTTACATCCATCTGCACCAACACAGTCTTTAGCAGCACCTCACTGATTCTATTTATGAACAAAACGGACCTTTTCCGGGACAAGATCCTACACTCTCGAAGACACTTGAGATTTTACCTTTCTAGTTACAAAGGCGCAGATGTTGATGTGGACGCTGCAGCCCACCACATAACTGCCATGTTCTCCTCACGTAACAGCAGTCCTGACAAGCTAGTGTACCACCACTTCACCACGGCCACAGACACCACGAACGTACAAGTGGTCTTTCACATGGTCATAGAGCAGGTTATGAAGGAGAACCTAGCAGCTGTCCAGCTGCTGTAAAAGTCACCTGAAGGCTGTAAGATGAGGGTTTATTTATTCAGTGCTGGTATCTTTATTTCATTGGTTGTTTTCCTGTGTGCAAATCATGTATTTAAGCAGCGAATGTTAATATGATAAGGCTGCACTTtacccatttattttaaaaccttttttaaataaaatatttattgatACACTTGGTC
>XM_039826118.1
TCAGTCTAAATAGATTTAGGATATCACAGATGAGGGTAAAAAGGCTAAACTCCAGAGCTCTAAAATAGAGCAAGACCTTTGTGAACATGCCCAGACTGAGATCAATGTGGTAAAAATCCTCATGCTTGgaaCTGCAGAGAGTGGAAAGAGCACCCTAATCAAACAGATTAAGATAATCCACAGTCACGGCTTCTCCAAACAGGAGCTCATAAGTTTTAAGCATGCAGTACTAGACAACCTGCTGACCTCCATGAAGTTTGTTCTTCAAGGAATGGGGATGCTGAGGATTAATCTTGCTAACAAGAAGAACAAGATGCATGCCCACTCCATCCTGTCCTGCAGTCAGTGTTTGGGGGAAGACCAGGAGCTGCTTCCTTTCGTGGCTCATGCAATCTGTGCACTTTGGGCCGACCAAGGGGTGCAAGCAGCTGCAGCCAGAGGTTACGAGTTTGAGCTCAATGACTCTGCACTCTATTTCTTTGAGAACATGAGTAGAATCATCGCTCCCAAATACGTTCCCACTGTGATGGATGTTCTGAGAGTCAGAGTGAGGACCTGTGGAATCATTGAGACACAGTTTCAACTTAATGAAATGATCTTTCGgtTGTATGACGTCGGGGGCCAGCGGAGTGTGAGGAGGAAGTGGCTCAGCTGCTTTGACTGTATTCAGGCTGTGTTGTATGTCGTGGCCCTGAGCAGCTATGATATGACACAGACGGACAAAACCTCAGGGAATCGGCTGCAGGAAAGTCTTGAACTTTTTACATCCATCTGCACCAACACAGTCTTTAGCAGCACCTCACTGATTCTATTTATGAACAAAACGGACCTTTTCCGGGACAAGATCCTACACTCTCGAAGACACTTGAGATTTTACCTTTCTAGTTACAAAGGCGCAGATGTTGATGTGGACGCTGCAGCCCACCACATAACTGCCATGTTCTCCTCACGTAACAGCAGTCCTGACAAGCTAGTGTACCACCACTTCACCACGGCCACAGACACCACGAACGTACAAGTGGTCTTTCACATGGTCATAGAGCAGGTTATGAAGGAGAACCTAGCAGCTGTCCAGCTGCTGTAAAAGTCACCTGAAGGCTGTAAGATGAGGGTTTATTTATTCAGTGCTGGTATCTTTATTTCATTGGTTGTTTTCCTGTGTGCAAATCATGTATTTAAGCAGCGAATGTTAATATGATAAGGCTGCACTTtacccatttattttaaaaccttttttaaataaaatatttattgatACACTTGGTC

Function

NR:

description
PREDICTED: guanine nucleotide-binding protein G(o) subunit alpha-like isoform X1

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function
GO:0004871 obsolete signal transducer activity molecular_function
GO:0031683 G-protein beta/gamma-subunit complex binding molecular_function
GO:0001664 G protein-coupled receptor binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039826115.1 True 1423 mRNA 0.46 10 14430021 14439109
XM_039826116.1 False 1398 mRNA 0.46 10 14430021 14439111
XM_039826117.1 False 1377 mRNA 0.45 10 14430021 14438900
XM_039826118.1 False 1266 mRNA 0.45 10 14430021 14438816

Neighbor

gene id symbol gene type direction distance location
LOC120575368 NA coding downstream 2703 14419362 ~ 14427318 (-)
rnf213a rnf213 coding downstream 12880 14384102 ~ 14417141 (-)
LOC120575134 NA coding downstream 141202 14285174 ~ 14288819 (-)
LOC120574465 sstr2,LOC104918336,LOC102291375,LOC103373483 coding downstream 323198 14099455 ~ 14106823 (-)
LOC120575451 rab26,LOC102798624,LOC101484267,LOC100707100 coding downstream 479265 13884337 ~ 13950756 (-)
LOC120575491 pcyt2,LOC103373415,LOC101487187 coding upstream 2692 14441803 ~ 14451655 (-)
pycr1a LOC103373386,LOC104918329,LOC106533854 coding upstream 32984 14472095 ~ 14475790 (-)
LOC120575481 myadml2,LOC103373375 coding upstream 37723 14476834 ~ 14479374 (-)
notum1a notum,LOC104918326 coding upstream 42226 14481337 ~ 14488923 (-)
LOC120575183 NA coding upstream 90327 14529438 ~ 14532650 (-)
LOC120575037 NA non-coding downstream 92947 14330945 ~ 14337074 (-)
G154825 NA non-coding downstream 103085 14325973 ~ 14326936 (-)
G154788 NA non-coding downstream 330740 14078514 ~ 14099281 (-)
G154791 LOC100698953,LOC106518679,LOC103373486 non-coding downstream 342255 14085742 ~ 14087766 (-)
LOC120575453 NA non-coding downstream 483624 13936768 ~ 13946397 (-)
G154948 LOC104962285,LOC104925065 non-coding upstream 188639 14627750 ~ 14664671 (-)
G154952 cyth1,LOC103140955,LOC102194078 non-coding upstream 194067 14633178 ~ 14636802 (-)
G154953 cyth1,LOC103392816,LOC101076412 non-coding upstream 200991 14640102 ~ 14647069 (-)
G155025 NA non-coding upstream 456268 14895379 ~ 14895624 (-)
G155039 NA non-coding upstream 524122 14963233 ~ 14963846 (-)
med9 med9 other downstream 372667 14050738 ~ 14057354 (-)
tfap4 tfap4 other downstream 798185 13589483 ~ 13631836 (-)
prkar1b prkar1b,LOC107661853,LOC107653458 other downstream 1008070 13335449 ~ 13421951 (-)
sun1 sun1,LOC104947709,LOC102193096,LOC103360714 other downstream 1417240 12973260 ~ 13012781 (-)
iqck NA other downstream 1457192 12954974 ~ 12972829 (-)
LOC120574967 mafg,LOC104918330,LOC108241257,LOC103373400,LOC101487863,LOC106533856 other upstream 15726 14454837 ~ 14471430 (-)
cenpx cenpx other upstream 87015 14526126 ~ 14529153 (-)
LOC120574989 LOC108241285,LOC103373333,LOC106518659 other upstream 94571 14533682 ~ 14543994 (-)
LOC120574213 NA other upstream 326623 14765734 ~ 14790778 (-)
LOC120574214 bahcc1,LOC106528540,LOC108241329,LOC107083174 other upstream 356535 14795646 ~ 14828239 (-)

Expression


Co-expression Network