LOC120575451 (rab26,LOC102798624,LOC101484267,LOC100707100)


Basic Information

Item Value
gene id LOC120575451
gene name rab26,LOC102798624,LOC101484267,LOC100707100
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 13884337 ~ 13950756 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039826248.1
GCAGTGCATAGTGCAGCGTCCCTGTGTCCTGATTGTTAAGGTGGAGCTTTCTGCCACATCACATCTATTTGCTGCCGCTACAACGCGCAGTGCTGAGGCTGTTCTACTGGAAAGAGCGAGCTGTCAGGAGCAGAAAGCGGCTGAACAACAACGGAAGCGAGAGCGTTTTTTGCATCTCAGGACAATTTCATCCTACTTTAGAGGTGTCGAGGAACATGCATTCAACGCGcaggttaaaagaaaaaaacatctgttAATTTAAGTTCTTCGCTGCAGCAACTTTTCAGTCGTCGGaagatttgttttctttgttttaactAAGAATTCATAAAGATAGTTTTGAAATCTTGAGAAATGTCTCGCAAGAAAGCTGCCAAAGGCAAAGCCGCGACCAGCAGCCCGTCTGCGGGCAGCCCCACCGGGAAAGGGAGCGGGAAAGCTGCGAGGAGCAGCCCGGGCATTGTTCAGATGAACGGCGTGGTCCATCCCAGCAGACCCTCCATCAGCAATAGCAGCGAGTTTTATGACATCGCTTTTAAGGTGATGCTGGTTGGAGACTCTGGTGTGGGGAAAACATGTCTACTGGTCCGTTTTAAAGACGGAGCTTTCCTGGCTGGCAGCTTCATCTCAACTGTGGGCATTGATTTTAGGAATAAAGTCCTGAACATTGATGGAGTCAAGGTGAAGCTCCAGATCTGGGACACAGCTGGACAGGAGCGGTTTCGCAGTGTCACTCATGCCTACTACCGTGACGCCCatgCTTTGCTTCTGCTGTACGACGTCACCAACAAAACATCCTTCGACAACATACAGGCATGGTTGACTGAGATCCATGAGTACGCCCAACAGGATGTGGTGCTCATGCTGCTTGGAAACAAGGCTGATGCCACTCATGAGAGGGTGGTGAAGAGAGAAGATGGCGAGAGGCTTGCAAAGGAGTTCGGAGTTCCCTTCATGGAGACCAGCGCCAGGTCAGGTCTCAACGTAGAGCTGGCTTTCACCGCTGTGGCTAAGGAGCTGAAGCACCGGTCTATGAAGGATCCCAGTGAGAAGTTTAAGCTCCAGGAGTATGTAAACAAGGAGATGAAAAGCACAGGCTGCTGCAGAACTTAAAgcctgtccgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcagtcacatTCATTTCGTACTGTAGGTGTTCATATCTGGCCCAATCACAGATGAGTCAGCTCCAGTGAGGTATACATCTTTTTGCCCTTCTGTTTCTCCACTCTCAAACCTCCCTGTCTGTTGTCCTGCACTCATCTCACTGCCCTACTCTACTTTGTTTGTCCTGCTTTTCCTCACCCACCTCCTCCTGCAGCTGTGAATGTAGGTGGTTTGCAAAAGACAAAGTTAGAAGCTGCACACCTCAGTTATAAATCTATTAATGGACATTTTCTTCCATAACTTTAGTTGCATGATATTTTAACCCTAGCATTGAATCGGATATCTACCTTTGCATTACCTTGTTTGGATATTTTATTGTTAAAGGGATTTAATCATAACAGAATGTATGTATTATGTAGATATTTTTGCAAGATACATGTAAAGCTATTTATTTCtccatttaaaatgtcagtGACAGTCGACGTTTTGGTTGAATGTACATTTTGGGAATTTTTTCAATATTAGAAGAATCAATGTTGAGTCTTTGAGAGCTCTAATGCAACCTCTCTTCTtgattatatataattttgtttttaaattatttaaaacacGATTTGACAAACATGATGTTAATAACTTTTTTCTGCATGTAAGAAAAAGATGAGAATAGCACTTTAGATGGTAAATAAGAGTATGGGTGGGGTTTTAGGAGGATGTTTGGGGAATAAAGAcccatagtatgttgaaaatgttaCCTAAAGTATTGGATACGACACACAgatgtgtttatttcttttgattttgaatgttttatttgtagTCAGATGTGCAAACCTTAGTGGGCTTCTATATTtcctgcttttattttccattcacaaatatataaatgggGTATATAGTGCCATTTCTTCTCAAACCTGTTCTTCATAAAAGAAGCATGGGTCTCTTTTTATATGACTTgcttagattagattagattagatttcaTCTTAGTCATAGAAACGGTACTGTACATTTTTGAGTTCATGTTCAGAGTAATGTATTgatttttggttttactaatTTTTAATGTGCAACTTCTTTCTTGTAATTGAAAATAAACTACAATAAAAATA

Function

symbol description
rab26 Enables GMP binding activity and GTP binding activity. Involved in several processes, including Golgi to plasma membrane protein transport; exocrine system development; and regulation of protein catabolic process at presynapse, modulating synaptic transmission. Located in Golgi membrane. Is anchored component of synaptic vesicle membrane.

NR:

description
PREDICTED: ras-related protein Rab-26-like

GO: NA

KEGG:

id description
K07913 RAB26; Ras-related protein Rab-26

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039826248.1 True 2380 mRNA 0.42 9 13884337 13950756

Neighbor

gene id symbol gene type direction distance location
LOC120575446 LOC104960164 coding downstream 20803 13860150 ~ 13863534 (-)
hmox2b LOC103358700,LOC108247647,LOC100705244,LOC101479559 coding downstream 119801 13757750 ~ 13764536 (-)
coro7 LOC103358706,LOC106915773 coding downstream 135735 13636809 ~ 13748602 (-)
pam16 pam16,LOC106601835,LOC103358706,LOC107695711 coding downstream 248175 13632142 ~ 13636162 (-)
srl srl coding downstream 297583 13572655 ~ 13586754 (-)
LOC120574465 sstr2,LOC104918336,LOC102291375,LOC103373483 coding upstream 148699 14099455 ~ 14106823 (-)
LOC120575134 NA coding upstream 334418 14285174 ~ 14288819 (-)
rnf213a rnf213 coding upstream 433346 14384102 ~ 14417141 (-)
LOC120575368 NA coding upstream 468606 14419362 ~ 14427318 (-)
LOC120575370 LOC104945235 coding upstream 479265 14430021 ~ 14439111 (-)
G154717 NA non-coding downstream 56546 13755664 ~ 13827791 (-)
G154723 NA non-coding downstream 108348 13774102 ~ 13775989 (-)
G154713 NA non-coding downstream 191866 13656018 ~ 13692471 (-)
G154601 NA non-coding downstream 629564 13254473 ~ 13254773 (-)
G154600 NA non-coding downstream 631131 13252924 ~ 13253206 (-)
G154788 NA non-coding upstream 127758 14078514 ~ 14099281 (-)
G154791 LOC100698953,LOC106518679,LOC103373486 non-coding upstream 134986 14085742 ~ 14087766 (-)
G154825 NA non-coding upstream 375217 14325973 ~ 14326936 (-)
LOC120575037 NA non-coding upstream 380189 14330945 ~ 14337074 (-)
G154948 LOC104962285,LOC104925065 non-coding upstream 676994 14627750 ~ 14664671 (-)
tfap4 tfap4 other downstream 252501 13589483 ~ 13631836 (-)
prkar1b prkar1b,LOC107661853,LOC107653458 other downstream 462386 13335449 ~ 13421951 (-)
sun1 sun1,LOC104947709,LOC102193096,LOC103360714 other downstream 871556 12973260 ~ 13012781 (-)
iqck NA other downstream 911508 12954974 ~ 12972829 (-)
LOC120575506 LOC100697827 other downstream 1146854 12735444 ~ 12737483 (-)
med9 med9 other upstream 99982 14050738 ~ 14057354 (-)
LOC120574967 mafg,LOC104918330,LOC108241257,LOC103373400,LOC101487863,LOC106533856 other upstream 504081 14454837 ~ 14471430 (-)
cenpx cenpx other upstream 575370 14526126 ~ 14529153 (-)
LOC120574989 LOC108241285,LOC103373333,LOC106518659 other upstream 582926 14533682 ~ 14543994 (-)
LOC120574213 NA other upstream 814978 14765734 ~ 14790778 (-)

Expression


Co-expression Network