LOC120575453


Basic Information

Item Value
gene id LOC120575453
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 13936768 ~ 13946397 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641993.1
ATTATGACACCCTTATTACCCACAATGTGACTCAACTGCCAACATGTTGGTCTGAGATTTgggtgtgttatgctagtagcgTCTGATGTAGCCTCAAGCTGCTTCCTCCACCAATCTTTCTGAGCTCAGTGGAAACTCTGCATAGAGGCCACTCCCCATGTTCCATGATTCCACTCATGACGCTTCCTCTGACCCCTGTGTGTCACAAGTTGGACCAGAAGTTTCGCACCTCAGAGTTAAAGCATATCAAATCAAGTTTCCCTTTTTAAGCACAGCAGGTCTTCACCACATATGActctggacagacatggatgtaaactgcaacttgactggttggcgGAGGCATACAACCGCAAAGCGGTAATTCTAGTTTATAGTTCTGATTTTTacttactttttcttttaactaaACTATATGTGATGTTGTTGTTGATAAAAAATTTCGGTGCAATATAAATCTTGGTCACAACTCTTTAATAACCATATTTAAGGGAtccttaatattttttattgtgtttatgtttataacaagtgcaggtgtgtgtaatttTTACGTGTGTAATGTTAATACAGTCAATTAATGTTTTTCACATTTGAGGTTTTATACACTTGGAAAGAAGTTTCATTTTCCTTAGTCAAAACTACAAAGAAAGTGATGCATAACAAATGTCTGTCTTCGAAACTGTATCTTTACATTGCTCCAACATTGTTGATGTTCTTTGTCAAACCACCTGAAATTGAAGCTGTAAACTTTGAATTCTTGCCTGAACTCTGACCCCCATAATGCCAAGCCAATCATCCCACCAAGACAAGCGATTCATCAGGAAGGCTGTATTTTCTGTGATTTGGTCAACCTCTGGTCAACAGTGTTTCATGGTTGCACTGGAAGACTGAGCCATCGTGTGCTCAATAGCATTGATAACAACTTAGTGGCTaaaagggctgaaaatgtgTTGGATATTCAGTTCACTTATCTCAATTTAGCTGGGTTGAGGAAGAGAGATTATCtcatttttattatgtttacaGGGAGATGATAGGGGAAAAACAgagaaagttaaaaaagaataattgaCTGTGGCTCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641993.1 True 1087 lncRNA 0.38 3 13936768 13946397

Neighbor

gene id symbol gene type direction distance location
LOC120575446 LOC104960164 coding downstream 73234 13860150 ~ 13863534 (-)
hmox2b LOC103358700,LOC108247647,LOC100705244,LOC101479559 coding downstream 172232 13757750 ~ 13764536 (-)
coro7 LOC103358706,LOC106915773 coding downstream 188166 13636809 ~ 13748602 (-)
pam16 pam16,LOC106601835,LOC103358706,LOC107695711 coding downstream 300606 13632142 ~ 13636162 (-)
srl srl coding downstream 350014 13572655 ~ 13586754 (-)
LOC120574465 sstr2,LOC104918336,LOC102291375,LOC103373483 coding upstream 153058 14099455 ~ 14106823 (-)
LOC120575134 NA coding upstream 338777 14285174 ~ 14288819 (-)
rnf213a rnf213 coding upstream 437705 14384102 ~ 14417141 (-)
LOC120575368 NA coding upstream 472965 14419362 ~ 14427318 (-)
LOC120575370 LOC104945235 coding upstream 483624 14430021 ~ 14439111 (-)
G154717 NA non-coding downstream 108977 13755664 ~ 13827791 (-)
G154723 NA non-coding downstream 160779 13774102 ~ 13775989 (-)
G154713 NA non-coding downstream 244297 13656018 ~ 13692471 (-)
G154601 NA non-coding downstream 681995 13254473 ~ 13254773 (-)
G154600 NA non-coding downstream 683562 13252924 ~ 13253206 (-)
G154788 NA non-coding upstream 132117 14078514 ~ 14099281 (-)
G154791 LOC100698953,LOC106518679,LOC103373486 non-coding upstream 139345 14085742 ~ 14087766 (-)
G154825 NA non-coding upstream 379576 14325973 ~ 14326936 (-)
LOC120575037 NA non-coding upstream 384548 14330945 ~ 14337074 (-)
G154948 LOC104962285,LOC104925065 non-coding upstream 681353 14627750 ~ 14664671 (-)
tfap4 tfap4 other downstream 304932 13589483 ~ 13631836 (-)
prkar1b prkar1b,LOC107661853,LOC107653458 other downstream 514817 13335449 ~ 13421951 (-)
sun1 sun1,LOC104947709,LOC102193096,LOC103360714 other downstream 923987 12973260 ~ 13012781 (-)
iqck NA other downstream 963939 12954974 ~ 12972829 (-)
LOC120575506 LOC100697827 other downstream 1199285 12735444 ~ 12737483 (-)
med9 med9 other upstream 104341 14050738 ~ 14057354 (-)
LOC120574967 mafg,LOC104918330,LOC108241257,LOC103373400,LOC101487863,LOC106533856 other upstream 508440 14454837 ~ 14471430 (-)
cenpx cenpx other upstream 579729 14526126 ~ 14529153 (-)
LOC120574989 LOC108241285,LOC103373333,LOC106518659 other upstream 587285 14533682 ~ 14543994 (-)
LOC120574213 NA other upstream 819337 14765734 ~ 14790778 (-)

Expression


Co-expression Network