LOC120574647



Basic Information


Item Value
gene id LOC120574647
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 9481185 ~ 9481676 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>unassigned_transcript_778
GTTCAGAAGCTCACATCTCCTCAGTTTCAACATAAACCATGTTCTCtggagctctgctgctgctgttggcagCTGGATgtgtgaagtgtgaacagtTGACCCAGCGAGCCTCTGTGACTGTGCAGCCAGGTCAACGTCTGACCATCACCTGTCAGGTCTCTTATTCTGTTGATAGctactacacagcttggatcagacagcctgcagggaaaggactggagtggattaGTAGTGATACAAACGTCAAAGACtcactgaagaacaagttcagtgTAAACTTGGACTCTTCCAGCAACACAGTGACTCTAAATGGACAGAATGTGCAGCCTGAAGACactgctgtgtattactgtgccagagagccacagtaacacaaaccatcagtagacctgaacaaaaacccctca

Function


GO: NA

KEGG:

id description
ko04672 Intestinal immune network for IgA production
ko05150 Staphylococcus aureus infection
ko05310 Asthma
ko05320 Autoimmune thyroid disease
ko05330 Allograft rejection
ko05340 Primary immunodeficiency
ko05416 Viral myocarditis

RNA


RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_778 True 407 V_gene_segment 0.48 2 9481185 9481676

Neighbor


gene id symbol gene type direction distance location
LOC120574373 NA coding downstream 44319 9435292 ~ 9436866 (-)
LOC120574659 NA coding downstream 56139 9424509 ~ 9425046 (-)
LOC120574660 NA coding downstream 60487 9420152 ~ 9420698 (-)
LOC120574369 NA coding downstream 72703 9407854 ~ 9408482 (-)
LOC120574368 NA coding downstream 74381 9391565 ~ 9406804 (-)
cacna1aa NA coding upstream 579610 10061286 ~ 10149482 (-)
gtf2f1 gtf2f1 coding upstream 685036 10166712 ~ 10176011 (-)
luc7l3 luc7l3,LOC102798435 coding upstream 1127322 10608998 ~ 10618057 (-)
LOC120574864 tob1 coding upstream 1191666 10673342 ~ 10677290 (-)
spag9a NA coding upstream 1257232 10738908 ~ 10772253 (-)
G153527 NA non-coding downstream 121335 9359528 ~ 9359850 (-)
G153508 NA non-coding downstream 177838 9248397 ~ 9303347 (-)
G153509 NA non-coding downstream 215818 9258210 ~ 9265367 (-)
G153462 NA non-coding downstream 261282 9219599 ~ 9219903 (-)
G153455 NA non-coding downstream 277326 9196758 ~ 9203859 (-)
G153539 NA non-coding upstream 60442 9542118 ~ 9548305 (-)
G153481 NA non-coding upstream 121181 9602857 ~ 9603106 (-)
G153588 NA non-coding upstream 270583 9752259 ~ 9798267 (-)
G153591 NA non-coding upstream 297613 9779289 ~ 9782563 (-)
G153597 NA non-coding upstream 312416 9794092 ~ 9842982 (-)
LOC120574594 NA other downstream 5836 9474829 ~ 9475349 (-)
LOC120574601 NA other downstream 8820 9471815 ~ 9472365 (-)
LOC120574378 NA other downstream 11983 9463591 ~ 9469202 (-)
LOC120574380 NA other downstream 13237 9467508 ~ 9467948 (-)
LOC120574379 LOC106526304 other downstream 15996 9464600 ~ 9465189 (-)
LOC120574381 NA other upstream 1969 9483645 ~ 9484106 (-)
LOC120574661 NA other upstream 5352 9487028 ~ 9487584 (-)
LOC120574382 NA other upstream 8958 9490634 ~ 9491209 (-)
LOC120574603 NA other upstream 9991 9491667 ~ 9495065 (-)
LOC120574650 NA other upstream 14207 9495883 ~ 9496318 (-)

Expression



Co-expression Network