LOC120574583


Basic Information

Item Value
gene id LOC120574583
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 9735626 ~ 9736834 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_821
TGATTTTAAGCTATTGTGAAATAATAATCACATACTGTAATGCAGACTGTAAAACTGGGTAGCACTTTTCGTCATTCAGTAATTACACATTTGAGTGataaaaatgacacaaagtttCCCAAGTATCCTTTTTTGGGTTTCTACATGCTCACACTACTTAGATTCTGTAAAGCAACAGATTATCTTAACATATCATATGTGGACACACATTTTTACATAACCATTAATTACTGCATTGAGGAAATCAATTATTTGATAAGCAAAACCTACATTAAGACAATCACAAAATCAGCCAACTGTCACGTTAACAGAATAGTTAATAGAATTTTTGTTATTGCATGAGagtcagatgagaagatcaTTGTAATTCTAATATGTGTCTggtttacatttcttttcctATAATAAATGATATGGTTACAATAGTCTTGACTATGTGTTACAGGACAGTCCATCCTTCTTTTATAGCCTGTCAGTGTCCTTCTCTATGCAAAGTGAACCTCCTCACAGTCTGCTATAAAGACTTGATATCATGCTGTCAGTTgcagcagaagaagagaagctCCCATCAGATCACCTTCAATAGCAACCATGTTCTCtgtagctctgctgctgctggctgctggatCCTGTGTGAACAGTATTGATCTCATCCAGACAGACTCAATGGTTGTGCAGCCTGGACAGTCTCTGACCATCAGCTGTCAGGTCTCTGGTTATTCTCTGACTGATAACAGCTATGCAACAGGTTGGATCAGACAGAGTGAAGGAAAACCAATGGACTGGATTTGCAATCGGTGGGGTGGAGGAGGCTTTGATCAAAATAATGCTCTGAAGAACAAGTTCCTTTACCACACACTCACGTCTACTAGCTCGGTGACATTAACAGGACAGAATCTGCAGCCTGAGGACAcagctgtgtattactgtgtgcGTGTAAGCTACACAGTGATGCAAACCACCAACAGACCTGCACAAATACCCAGCAACCAGCATGTGACTCAAACACGAATTTACATGAGATTGCTATGGATAAAAGCgtcaaatgtaatgtaatcactAATTCTTGAGTTCAACTTAACATGTACCATACAAACAGCCTTTATTTATGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_821 True 1113 V_gene_segment 0.39 2 9735626 9736834

Neighbor

gene id symbol gene type direction distance location
LOC120574373 NA coding downstream 298760 9435292 ~ 9436866 (-)
LOC120574659 NA coding downstream 310580 9424509 ~ 9425046 (-)
LOC120574660 NA coding downstream 314928 9420152 ~ 9420698 (-)
LOC120574369 NA coding downstream 327144 9407854 ~ 9408482 (-)
LOC120574368 NA coding downstream 328822 9391565 ~ 9406804 (-)
cacna1aa NA coding upstream 324452 10061286 ~ 10149482 (-)
gtf2f1 gtf2f1 coding upstream 429878 10166712 ~ 10176011 (-)
luc7l3 luc7l3,LOC102798435 coding upstream 872164 10608998 ~ 10618057 (-)
LOC120574864 tob1 coding upstream 936508 10673342 ~ 10677290 (-)
spag9a NA coding upstream 1002074 10738908 ~ 10772253 (-)
G153498 NA non-coding downstream 20565 9288303 ~ 9715061 (-)
G153481 NA non-coding downstream 132520 9602857 ~ 9603106 (-)
G153539 NA non-coding downstream 187321 9542118 ~ 9548305 (-)
G153456 NA non-coding downstream 234159 9199658 ~ 9501467 (-)
G153588 NA non-coding upstream 15425 9752259 ~ 9798267 (-)
G153591 NA non-coding upstream 42455 9779289 ~ 9782563 (-)
G153597 NA non-coding upstream 57258 9794092 ~ 9842982 (-)
G153596 NA non-coding upstream 170406 9907240 ~ 10018859 (-)
G153622 NA non-coding upstream 282032 10018866 ~ 10019266 (-)
LOC120574609 NA other downstream 2431 9732686 ~ 9733195 (-)
LOC120574633 LOC102776372 other downstream 4386 9730610 ~ 9731240 (-)
G153584 NA other downstream 13002 9722181 ~ 9722624 (-)
LOC120574592 NA other downstream 49578 9685396 ~ 9686048 (-)
LOC120574395 NA other downstream 53862 9680832 ~ 9681764 (-)
LOC120574648 NA other upstream 85311 9822145 ~ 9822993 (-)
gtpbp1 gtpbp1,LOC104924447,LOC102799794 other upstream 615324 10352158 ~ 10390176 (-)
LOC120574455 NA other upstream 1047278 10784112 ~ 10791565 (-)
LOC120574486 NA other upstream 1341711 11078545 ~ 11080607 (-)
tnrc6c1 LOC103361861 other upstream 1361482 11098316 ~ 11137528 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_026551 ighv8-3 coding NC_007114.7 CM002887.2 34070022 ~ 34070451 (-)