G162168


Basic Information

Item Value
gene id G162168
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 36462 ~ 37525 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU219521
TGAGGTCATCAGCCTCCCTGATCAAACTggtcgcccccccccccttcctgaAATCAAACAGCCTGACTAAATAACAAGACCACACTTTCAACATAACAAGAATATATAAAGCCGCATCCTGAAGGGAAAACAATCATAATACAACAGAATGAAGATCTCTGTGAGTTTTACGCTGTGGCTGCTGCTCGGCTCCGTCTCCGCTCAAGGAAGTACTGATTCCGCTGAGCTGACAGAGCTGAAGGCCTCGTTGGCTCAACTGAAGGCTGACTTGATTACAGATAAAGCAGAACTGAAGACTGAAGTGGACAGGCTGAAGCAACAATTACAAGtgtgtctttctctctgctgcttctaGCAGTTAGAAGATTGTAACTCCTAGAAGCAGAAGAATCCCCAGGTACAAAGTCTACCAACTGCTCTTTTCTTCTGGAACGATGACATGCTTTTAGCTTCAACTACACATAATAGATCTTTATGTTTTGGAGGAGATAGAACTCAACATGATCAGTTTAATGGTTGATgagtttttaaatgacattgttctctctctctctctctctctctctctctctctctgctttgtctctct

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0000255 allantoin metabolic process biological_process
GO:0044421 obsolete extracellular region part cellular_component
GO:0005576 extracellular region cellular_component
GO:0005615 extracellular space cellular_component

KEGG:

id description
ko00630 Glyoxylate and dicarboxylate metabolism
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
TU219521 True 589 lncRNA 0.44 3 36462 37525

Neighbor

gene id symbol gene type direction distance location
LOC120544147 NA coding upstream 147887 185412 ~ 194355 (-)
LOC120544162 NA coding upstream 274867 312392 ~ 319615 (-)
LOC120544159 NA coding upstream 324481 362006 ~ 366249 (-)
mat2b mat2b coding upstream 354542 392067 ~ 427766 (-)
slc23a1 NA coding upstream 400426 437951 ~ 462468 (-)
G162169 NA non-coding upstream 43986 81511 ~ 82829 (-)
G162175 NA non-coding upstream 66758 104283 ~ 105174 (-)
G162187 NA non-coding upstream 78530 116055 ~ 193614 (-)
G162190 NA non-coding upstream 94394 131919 ~ 133571 (-)
G162206 NA non-coding upstream 182611 220136 ~ 220441 (-)
G162166 NA other downstream 13025 21716 ~ 23437 (-)
ndufa2 ndufa2 other upstream 57110 94635 ~ 100707 (-)
LOC120544212 LOC101481373,LOC102305685,LOC102212117 other upstream 64278 101803 ~ 156815 (-)
pwwp2a pwwp2a,slc23a1,LOC102781148,LOC103395589 other upstream 433567 471092 ~ 502104 (-)
LOC120544218 LOC103373995,LOC103459907,LOC105918498 other upstream 506179 543704 ~ 558922 (-)
ttc1 ttc1 other upstream 532710 570235 ~ 578849 (-)

Expression


Co-expression Network