G162169


Basic Information

Item Value
gene id G162169
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 81511 ~ 82829 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU219522
TTCCTGAAATCAAACAGCCTGACTAAATAACAGGACCACACTTTCAACATAACAAGAATACATAAAGCAGCATCCTGAAGGGAAAACAGTCATAATACAACAGAATGAAGATCTCAGTGAGTTTTACGCTGTGGCTGCTGCTCGGCTCCGTCTCCACAAGTGAAAATGTTGAAATCCAACCGGCTTCTCCTCCAGACGTCTACGCTGAGCTGAGAGAGCTGAAGGACTCGTTGGCTCAACTGAAGGCTGACTTGATTACAGATAAAGCAGAACTGAAGGCTGAAGTGGACAGGCAGAAGCAACAATTACAAGtttgtctttctctctgctgcttctaGCAGTTAGAAGATTGTAACTCCTAGAAGCAGAAGAATCCCCAGtccgaCAGGTTGCATTCTCAGCCTCTCTGGAGGCTCTACAAATACTGGACCCTTTCCCTCGCCCACTACCCTGATCTTCAAACACATCCAGACCAACATCGGAAATGCCTACAACCCAACCACAGGTAGCTCTGATATTCTAACAATACATTTTAGGGATGCATGGATATGATCAATGAACACAT

Function

GO: NA

KEGG:

id description
ko00120 Primary bile acid biosynthesis

RNA

RNA id representative length rna type GC content exon number start site end site
TU219522 True 565 lncRNA 0.45 4 81511 82829

Neighbor

gene id symbol gene type direction distance location
LOC120544147 NA coding upstream 102583 185412 ~ 194355 (-)
LOC120544162 NA coding upstream 229563 312392 ~ 319615 (-)
LOC120544159 NA coding upstream 279177 362006 ~ 366249 (-)
mat2b mat2b coding upstream 309238 392067 ~ 427766 (-)
slc23a1 NA coding upstream 355122 437951 ~ 462468 (-)
G162168 NA non-coding downstream 43986 36462 ~ 37525 (-)
G162175 NA non-coding upstream 21454 104283 ~ 105174 (-)
G162187 NA non-coding upstream 33226 116055 ~ 193614 (-)
G162190 NA non-coding upstream 49090 131919 ~ 133571 (-)
G162206 NA non-coding upstream 137307 220136 ~ 220441 (-)
G162218 NA non-coding upstream 165843 248672 ~ 249157 (-)
G162166 NA other downstream 58074 21716 ~ 23437 (-)
ndufa2 ndufa2 other upstream 11806 94635 ~ 100707 (-)
LOC120544212 LOC101481373,LOC102305685,LOC102212117 other upstream 18974 101803 ~ 156815 (-)
pwwp2a pwwp2a,slc23a1,LOC102781148,LOC103395589 other upstream 388263 471092 ~ 502104 (-)
LOC120544218 LOC103373995,LOC103459907,LOC105918498 other upstream 460875 543704 ~ 558922 (-)
ttc1 ttc1 other upstream 487406 570235 ~ 578849 (-)

Expression


Co-expression Network