pwwp2a (pwwp2a,slc23a1,LOC102781148,LOC103395589)


Basic Information

Item Value
gene id pwwp2a
gene name pwwp2a,slc23a1,LOC102781148,LOC103395589
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 471092 ~ 502104 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU219661
GAGGAGAAGCGTCGCCGTaagtcctcctcctcttcttcttcttcctcttcctcgtccTCGCGGCCCGCCACGTTCTCCAAGTCCGTGTCCAAGGCGGCGCTGCCGGACGGCCGCACCGTGTGCGCCGGAGACATCGTGTGGGCCAAGATCTACGGCTTCCCGTGGTGGCCTGCGCGCGTGCTGGGCATCACCGTGGCGCGCCGCGGCGACACGGGGCTGGCGGTGACGCAGCAGGCGCGCGTGTCGTGGTTTGGCTCGCCGACCACGTCCTTCCTGCCGCTCGGCCAGCTGGCGCCGTTCCTCGAGAGCTTCCAGTCGCGCTTCgacaggaagaggaagggcCCGTACCGCCGCGCCATCGCCGAGGCCGCCAGCGCCGCCAAGCAGCTCACGCCTGAGGTCCGCGCGCTGCTCACACAGTTTGAGACGTAGCatcggcccccccccccccacctcagacaagacacacacacacacacacacacacagatacacaaacacacacacggatacacacacatacacacacacacacagatacacacacacacacacacagatacacacacacacacacacacacacacacacacacacacacacacacacacagatacacacacacacagatacacacacacacacacacagatacacacacacacacacacagatacacacacacacacacacacacacacacagatacacacacacacacacacacatacacacacacacacatatatatacacacagatacacacacaaacacacacacacacacatacacacacacacagagatacacacacacacacacacacacacacacacacacacacacacacacaaacacacaaacacacacacacacacacatacacacacacacagagatacacacacaaacacacacacacacacacatacacacacacacagagatacacacacacacacacacacacacacacacacataaacagatacacacacacacataaacagatacacacacagatacacagatacacacacacatatacacacacacagatacacgcacactgacacacacacacacacaataggccCCGCCCCTTTAGACTGattcctgtctgtctgagactgatgcagacagacaggcagacagacagacggactcTGTTCATGTTTCTGTTCTTCTTGTTTAGACTGTGGGCGGGGCTTCTCTTTACAGGCTCCTCCCCCTGCCTTCAGAGGCCCCTCCCCCTATCTTCAGAGGCCCCTCCCCCTATCTTCAGAGGCCCCTCCCCTGTCTTCAGAGGCCCCTCCCCCTATTTTCAGAGGCTCCTCCCCCTATCTTCAGAGGCCCCCTCCCCCTGTCTTCAGAGGCTCCTCCCCCTATCTTCAGAGGCCCCTCCCCCTGTCTTCAGAGGCCCCTCCCCCTGCCTTCAGAGGCCAGTGTGATCTCGGATCTCCCGGCCGGAGCTCGGTCTTTTAAGGGGTTAATGATGtcacagtgatgtcatcagactACAGTGTGTTTATCAGGCAGGGAGGCTCTCTCCCAGtgcatcatgggaaatgtaggatccagagATGAGTTTCTAAAGTGAGATTCAGACTAAAGTTTGTTCTGTTTCTTTAAGAGTAAGATTCAGcctgctgattggctgacttAACACATCACGATGATGTCACTCGTTTACGtcaataatgtaaaaataaacactAATTAAGATCCagaagctaagctaaccgttgCCGTAGACGCGGCGCGTGACGCGATAGTTTAGTTAACAGAGTGTTGTCCAAACTGAGGCCGGGGTCTCAAACACGGTCCAGAGCAGAGCCGCAGCGATCCAGAGGGGATCAGCTAATGCATCACGTGTTCTTTGATTGGTCCCCGTAGTTTGGTCCTCAGAGCCAATCAGAATCTGAGAATTTAGAGGGCTGTTTCTTTTATTGAGGTAGAGAATTGTTGACATTCTGAGattaattttaatgtttttaattattgttttgaTGCTCAGAGATGTTTTATTTAGACAGACGTCTCACTCTGTCCGTGTTTGGTCCCCGACCTCGATGacgctgatgatgatgatgatgatgatgatgatgatgaaggtgTTGTAGTTCCAGACTCTTTTTACCGTCTGTTTGCAGATCAGAGATCCTGAACTAAAACCTGTTGGGACAAAATAACGGAAACACACGGACAAAAATCTAAATCTGAGATGCGact
>TU219662
GAGGAGAAGCGTCGCCGTaagtcctcctcctcttcttcttcttcctcttcctcgtccTCGCGGCCCGCCACGTTCTCCAAGTCCGTGTCCAAGGCGGCGCTGCCGGACGGCCGCACCGTGTGCGCCGGAGACATCGTGTGGGCCAAGATCTACGGCTTCCCGTGGTGGCCTGCGCGCGTGCTGGGCATCACCGTGGCGCGCCGCGGCGACACGGGGCTGGCGGTGACGCAGCAGGCGCGCGTGTCGTGGTTTGGCTCGCCGACCACGTCCTTCCTGCCGCTCGGCCAGCTGGCGCCGTTCCTCGAGAGCTTCCAGTCGCGCTTCgacaggaagaggaagggcCCGTACCGCCGCGCCATCGCCGAGGCCGCCAGCGCCGCCAAGCAGCTCACGCCTGAGGTCCGCGCGCTGCTCACACAGTTTGAGACGTAGCatcggcccccccccccccacctcagacaagacacacacacacacacacacacacagatacacaaacacacacacagatacacacacacacacacacacacagatacacacacacacacacagatacacacacacacacacacacacacacacacacacacacacatatacacacacacacacacacacacacacaccatacacacacacacacagatacacacacacacacacacagatacacacacacacacacacacacacacacacacacacacacacacacacacagatacacacacacacagatacacacacacacacacacacatacacacacacacacacaaacacacacacgatacacacacacagatacacacacacacacacacagatacacacacacacacacacacacacacacagatacacacacacacacacacacatacacacacacacacatatatatacacacagatacacacacaaacacacacacacacacacatacacacacacacagagatacacacacaaacacacacacacacacacatacacacacacacagagatacacacacacacacacacacacacacacacacataaacagatacacacacacacataaacagatacacacacagatacacagatacacacacacatatacacacacacagatacacgcacactgacacacacacacacacaataggccCCGCCCCTTTAGACTGattcctgtctgtctgagactgatgcagacagacaggcagacagacagacggactcTGTTCATGTTTCTGTTCTTCTTGTTTAGACTGTGGGCGGGGCTTCTCTTTACAGGCTCCTCCCCCTGCCTTCAGAGGCCCCTCCCCCTATCTTCAGAGGCCCCTCCCCCTATCTTCAGAGGCCCCTCCCCTGTCTTCAGAGGCCCCTCCCCCTATTTTCAGAGGCTCCTCCCCCTATCTTCAGAGGCCCCCTCCCCCTGTCTTCAGAGGCTCCTCCCCCTATCTTCAGAGGCCCCTCCCCCTGTCTTCAGAGGCCCCTCCCCCTGCCTTCAGAGGCCAGTGTGATCTCGGATCTCCCGGCCGGAGCTCGGTCTTTTAAGGGGTTAATGATGtcacagtgatgtcatcagactACAGTGTGTTTATCAGGCAGGGAGGCTCTCTCCCAGtgcatcatgggaaatgtaggatccagagATGAGTTTCTAAAGTGAGATTCAGACTAAAGTTTGTTCTGTTTCTTTAAGAGTAAGATTCAGcctgctgattggctgacttAACACATCACGATGATGTCACTCGTTTACGtcaataatgtaaaaataaacactAATTAAGATCCagaagctaagctaaccgttgCCGTAGACGCGGCGCGTGACGCGATAGTTTAGTTAACAGAGTGTTGTCCAAACTGAGGCCGGGGTCTCAAACACGGTCCAGAGCAGAGCCGCAGCGATCCAGAGGGGATCAGCTAATGCATCACGTGTTCTTTGATTGGTCCCCGTAGTTTGGTCCTCAGAGCCAATCAGAATCTGAGAATTTAGAGGGCTGTTTCTTTTATTGAGGTAGAGAATTGTTGACATTCTGAGattaattttaatgtttttaattattgttttgaTGCTCAGAGATGTTTTATTTAGACAGACGTCTCACTCTGTCCGTGTTTGGTCCCCGACCTCGATGacgctgatgatgatgatgatgatgatgatgatgatgaaggtgTTGTAGTTCCAGACTCTTTTTACCGTCTGTTTGCAGATCAGAGATCCTGAACTAAAACCTGTTGGGACAAAATAACGGAAACACACGGACAAAAATCTAAATCTGAGATGCGact
>TU219663
GAGGAGAAGCGTCGCCGTaagtcctcctcctcttcttcttcttcctcttcctcgtccTCGCGGCCCGCCACGTTCTCCAAGTCCGTGTCCAAGGCGGCGCTGCCGGACGGCCGCACCGTGTGCGCCGGAGACATCGTGTGGGCCAAGATCTACGGCTTCCCGTGGTGGCCTGCGCGCGTGCTGGGCATCACCGTGGCGCGCCGCGGCGACACGGGGCTGGCGGTGACGCAGCAGGCGCGCGTGTCGTGGTTTGGCTCGCCGACCACGTCCTTCCTGCCGCTCGGCCAGCTGGCGCCGTTCCTCGAGAGCTTCCAGTCGCGCTTCgacaggaagaggaagggcCCGTACCGCCGCGCCATCGCCGAGGCCGCCAGCGCCGCCAAGCAGCTCACGCCTGAGGTCCGCGCGCTGCTCACACAGTTTGAGACGTAGCatcggcccccccccccccacctcagacaagacacacacacacacacacacacacagatacacaaacacacacacggatacacacacacacacacacacacacacacagatacacacacacacacacacacacacacacagatacacacacacacacacacacatacacacacacacacatatatatacacacagatacacacacacacacacacacatacacacacacacagagatacacacacaaacacacacacacacacacatacacacacacacagagatacacacacacacacacacacacacacacacacataaacagatacacacacacacataaacagatacacacacagatacacagatacacacacacatatacacacacacagatacacgcacactgacacacacacacacacaataggccCCGCCCCTTTAGACTGattcctgtctgtctgagactgatgcagacagacaggcagacagacagacggactcTGTTCATGTTTCTGTTCTTCTTGTTTAGACTGTGGGCGGGGCTTCTCTTTACAGGCTCCTCCCCCTGCCTTCAGAGGCCCCTCCCCCTATCTTCAGAGGCCCCTCCCCCTATCTTCAGAGGCCCCTCCCCTGTCTTCAGAGGCCCCTCCCCCTATTTTCAGAGGCTCCTCCCCCTATCTTCAGAGGCCCCCTCCCCCTGTCTTCAGAGGCTCCTCCCCCTATCTTCAGAGGCCCCTCCCCCTGTCTTCAGAGGCCCCTCCCCCTGCCTTCAGAGGCCAGTGTGATCTCGGATCTCCCGGCCGGAGCTCGGTCTTTTAAGGGGTTAATGATGtcacagtgatgtcatcagactACAGTGTGTTTATCAGGCAGGGAGGCTCTCTCCCAGtgcatcatgggaaatgtaggatccagagATGAGTTTCTAAAGTGAGATTCAGACTAAAGTTTGTTCTGTTTCTTTAAGAGTAAGATTCAGcctgctgattggctgacttAACACATCACGATGATGTCACTCGTTTACGtcaataatgtaaaaataaacactAATTAAGATCCagaagctaagctaaccgttgCCGTAGACGCGGCGCGTGACGCGATAGTTTAGTTAACAGAGTGTTGTCCAAACTGAGGCCGGGGTCTCAAACACGGTCCAGAGCAGAGCCGCAGCGATCCAGAGGGGATCAGCTAATGCATCACGTGTTCTTTGATTGGTCCCCGTAGTTTGGTCCTCAGAGCCAATCAGAATCTGAGAATTTAGAGGGCTGTTTCTTTTATTGAGGTAGAGAATTGTTGACATTCTGAGattaattttaatgtttttaattattgttttgaTGCTCAGAGATGTTTTATTTAGACAGACGTCTCACTCTGTCCGTGTTTGGTCCCCGACCTCGATGacgctgatgatgatgatgatgatgatgatgatgatgaaggtgTTGTAGTTCCAGACTCTTTTTACCGTCTGTTTGCAGATCAGAGATCCTGAACTAAAACCTGTTGGGACAAAATAACGGAAACACACGGACAAAAATCTAAATCTGAGATGCGact
>XM_039777723.1
GGGTCCTGGATAACACAGCGGAAGAAAATGGCGGCCGTGGCTGCAGAGCCAGGAGCTGCAGCGGTTCCGACAACAACAATAACCGCGGCGACGGACGACGAGGGCTCGGGCGAACCGGGCCGGGCCGTGCCGCTTCACCCCGGCGGGGGAGGAGGGGAGATGGACGGGTCTGCAGCGGAGATCCCCCGGGGGGAGGATGAAGGAGACGCGGAGCAGCGCCGCCATGTCAGGCCGGAGTCCGCGGCGGGAAAACACACCGAGGAACTGATCCAGAACTTCCCTCCGGAGCCGATCAGCTTGGACCGGTTCTCCCCCGGAGTACCGGCCGACCCAGAGCTGCACAACCCGCAGTCCCCCGCCGTGTTCCTGCACTCCCTCCCAGCCGCGGAGCCCAGTAACTCTAACCCGGAGCCGAGGCCCGGTACTGGGCTGTCTCTGCAGGAACCGGCGGGACCGACGGACACTCCGGTGCACCCGGAGCCGTGTAACCCTGACCCTAATAACCCTAACCCGGGCCTTCCGGAGCCCGGTCTGCAGGATCTGAGTCCCGGCTCAGAGGTCCGGGTCTCCCTGGATCACGTCATCGATGACGCGCTGGTGGTGTCGTTCCGGCGGGGGGAGAAGGTGTTCTCGGGGGTTCTGATGGATGTCTCCAGAAGgtttggGCCGTACGGTATTCCCATCACGGTGTATCCCAGACGAGATGACGGGCGTTGCCCCCAGAGGTCGCTGCCGGCGCTCCCTGATGTCGACCCGTCCATCAAACAGGAAGTGGTCATCGTGTCAGAGGGCGTGTCCCCGCCCCCCCCGCAGCCTTGGATGTCCAAACCGCCGCCGCTGTTCCAGGAGGGGGCGCCGTACCCCCCCCCTCTGTTCCTGCGGGACACGTACCACCAGGCCGTGCCGCAGCCGATGCCGCGCAAGATCAAGCGCCCCAAACGGCGCTACCGCTGCGAGGAGCCCACCTCCATCATGAACGCCATCAAGCTCCGCCCCCGCCAGGTGCTCTGTGACAAGTGCAAAGCCGTGGTGGCGTCCGGCGGCCACCTGGAGGCGCGCCGCGGCGAGGACGCGTCACGCCGCCGCCGAGCGGCCGAGGCGCCGCCGCTGAACTCTGAGCTCAAACGTCTGAGGAGTGACGACCGGAGCGCACGATCGGCGCCGGACAGACGCCCCGCGATACGTGTGACATCATCGTCCTCGCCTCGCCGCGTCCTGAGGGGCGTGGCTTCGTCCTCGCCGGCGGCCTCCTCCAGCCGACTCTGTCTGAAGCTCGGTGCTCAGAAGGTTCTGGACAAACGGCGCTCCAAAGCTCGCCACGCCCTCAACAAGCTGCCGGCCGCCGTACAGACGATACGGACGGCCCCCATGCCGGCGGCGCCTCGCCGGCCCAAAGACCCCGCCCCCCCGGCTCAGAACCAGACCCCCGGCCCGGCTCTGGGGCCGGACGGCGGCCGGGCGGTGACCCGCGCCGCGGCGCTGCAGAGCCGCCACCAGAAGGTCCACTTCACTCGCCGCCTGCAGAACAGCGCGGCGGCCGTCGGCTCGCCACTTCCTCCCAGAATGCGTCTGAAACCTCAAAGGTATCGAACCGACGACAGCcaggcgcccccccccccctgcccctCCTCGCCCTCCCCCTCCTCGCCGCCCAAACACAGCGCTCGCAGCTCGCCTCCCAAACCGGCTGTAAGCCCCACCCCCTCAGCCGCTTCGAACCCTGACCCCCCCGCAgcacctccccctcctcctccccccaccttCTGTGTTGCCGTGGAGACGCAGGAGGGCCCCCATCCtcaggaggaggcagagcgGGAGGCGGAGTCTCCTCCGTGCTCcgtccaatcagagagcagctcagAGACCTTGGCCCCCCCTGGAGACCAGCCCTCCCCGGCCCCTCCCCTCCCCGAGGGGCCGAGGGACGAGGAGGAGAAGCGTCGCCGTaagtcctcctcctcttcttcttcttcctcttcctcgtccTCGCGGCCCGCCACGTTCTCCAAGTCCGTGTCCAAGGCGGCGCTGCCGGACGGCCGCACCGTGTGCGCCGGAGACATCGTGTGGGCCAAGATCTACGGCTTCCCGTGGTGGCCTGCGCGCGTGCTGGGCATCACCGTGGCGCGCCGCGGCGACACGGGGCTGGCGGTGACGCAGCAGGCGCGCGTGTCGTGGTTTGGCTCGCCGACCACGTCCTTCCTGCCGCTCGGCCAGCTGGCGCCGTTCCTCGAGAGCTTCCAGTCGCGCTTCgacaggaagaggaagggcCCGTACCGCCGCGCCATCGCCGAGGCCGCCAGCGCCGCCAAGCAGCTCACGCCTGAGGTCCGCGCGCTGCTCACACAGTTTGAGACGTAGCatcggccccccccccccca

Function

symbol description
slc23a1 Predicted to enable transmembrane transporter activity. Predicted to act upstream of or within L-ascorbic acid transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human SLC23A1 (solute carrier family 23 member 1).
pwwp2a Orthologous to human PWWP2A (PWWP domain containing 2A).

NR:

description
PWWP domain-containing protein 2A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU219661 False 2233 TUCP 0.52 4 471092 473969
TU219662 False 2297 lncRNA 0.52 3 471092 473969
TU219663 False 2001 lncRNA 0.52 3 471092 473969
XM_039777723.1 True 2384 mRNA 0.69 4 473518 502104

Neighbor

gene id symbol gene type direction distance location
slc23a1 NA coding downstream 8624 437951 ~ 462468 (-)
mat2b mat2b coding downstream 43326 392067 ~ 427766 (-)
LOC120544159 NA coding downstream 104843 362006 ~ 366249 (-)
LOC120544162 NA coding downstream 151477 312392 ~ 319615 (-)
LOC120544147 NA coding downstream 276737 185412 ~ 194355 (-)
oatx LOC103373994,LOC104932490 coding upstream 6033 508137 ~ 536952 (-)
pfdn1 pfdn1 coding upstream 58240 560344 ~ 568709 (-)
tmprss15 NA coding upstream 88930 591034 ~ 632939 (-)
LOC120544220 NA coding upstream 134550 636654 ~ 663746 (-)
LOC120544137 NA coding upstream 192161 694265 ~ 727005 (-)
G162258 NA non-coding downstream 8208 462678 ~ 462884 (-)
G162252 NA non-coding downstream 72913 397823 ~ 398179 (-)
LOC120544187 NA non-coding downstream 92406 371982 ~ 378686 (-)
G162242 NA non-coding downstream 114566 356211 ~ 356526 (-)
G162186 NA non-coding downstream 150274 320246 ~ 320818 (-)
G162269 NA non-coding upstream 32089 534193 ~ 535481 (-)
G162261 NA non-coding upstream 50294 552398 ~ 592059 (-)
G162262 NA non-coding upstream 89664 591768 ~ 600857 (-)
G162293 NA non-coding upstream 174561 676665 ~ 683561 (-)
G162295 NA non-coding upstream 205355 707459 ~ 708067 (-)
LOC120544212 LOC101481373,LOC102305685,LOC102212117 other downstream 314277 101803 ~ 156815 (-)
ndufa2 ndufa2 other downstream 370385 94635 ~ 100707 (-)
G162166 NA other downstream 447655 21716 ~ 23437 (-)
LOC120544218 LOC103373995,LOC103459907,LOC105918498 other upstream 41600 543704 ~ 558922 (-)
ttc1 ttc1 other upstream 68131 570235 ~ 578849 (-)
G162311 rps14,RPS14,LOC100194652 other upstream 284667 786771 ~ 794731 (-)
LOC120544221 NA other upstream 326991 829095 ~ 844858 (-)
chm chm,LOC104936337,LOC106675663,LOC101479632,LOC108251494 other upstream 357828 859932 ~ 890410 (-)

Expression


Co-expression Network