G162398


Basic Information

Item Value
gene id G162398
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 1381761 ~ 1424401 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU219894
TACATGGCATCAGTTAGTCCTCATTTTCTGAGGAAACTAAATCTGGATACAGATGGGACTGGAATACTGCAGTGATAGTTGGAGCTGATCATTGACCCACTGATCAAGATTCATTAGTGAGAAGCAGATCAGAAGAGTAAGAGAGATCGTCGTGTTAGTTATCAGGGAgttggttttattgtttatttcttcacaccTGAGCAGGTCTTCTGATCCTCAGACATGGACCCAGTTCCTCCTCCAGATCTCACCATCGTCCTTCTGGGACACGCCGGAGTCGGTAAAAGTGCTTCAGGAAACACCATCCTGGGACGACCAGCGTTTGTGTCGAAGCCGTCCTTTGAACCAGTGACGACACAGATCTCTGAACAAACAGGAAATGTGCTCGGGAAACCAATCTCAGTGGTCGATACTCCGGGAATATTAGGGAGGAAGGACACAAAGAAGATTAAGAAGTACGGTAAGAAGCTTTGTGTCATCCCGCAGACGTTGTCTGTTTCTGGTGGTGATCAGAGTTGGACTGTTCACAGAGGAGGACAAGAAGGCTGTGAAAAGTAGCTAGGAAAGTCCCTCGGGATTTCGGGGGTGAAAAAGAGTTACCTGCTCTTCACTGGTGGTGATATGTTACAGGGCAGGACATTGAAGGATTTGATCTTTAAAGGGATGGGAAGAGAGCTTCCAAAAGTTGTTAGAAAGTTTGCGGGGTATCACTTCTTCAACAAtaaagatgatgatgaagaacAAGTCAGAGAGCTGTTGAAGAAGTCCGCACGTCCCAACCCAGGACCAGCCTGATTCACCAGCTGATGATCCCAACAAGCGGAGGGTGGTGCTGATCGGTCTTCCTGGAGCTGGAAAAAGTTCCTCTGGGAACACCATCTTAAGATCAGATCAGTTTAAATCAGGAGGTGACTTTGATTCAGTCACTACTGAGACTGTCTCTAAGTCAGCCATAGTGGAGGGTCGTCGGGTCACGGTGGTCGATACTCCAGGATTCACTGATCCGACTGGTGAACAGCTGTATGAGGGGATCATGAAGTCAGTAGTAGAGGCCAGTCCAGGACCTCATGCCTTTGTTATTGTGGTCAGAATAGGAAGAATCACAGAAACAGACATCAAACTGTTCAAGCTGCT
>TU219895
ATTTTAGTACTCTTAAAATGAAAGTGgagctttattttgaaatctgaTCATGTCTGTATGCACATCTCTTCAGAGTGAGAAGCAGATCAGAAGAGTAAGAGAGATCGTCGTGTTAGTTATCAGGGAgttggttttattgtttatttcttcacaccTGAGCAGGTCTTCTGATCCTCAGACATGGACCCAGTTCCTCCTCCAGATCTCACCATCGTCCTTCTGGGACACGCCGGAGTCGGTAAAAGTGCTTCAGGAAACACCATCCTGGGACGACCAGCGTTTGTGTCGAAGCCGTCCTTTGAACCAGTGACGACACAGATCTCTGAACAAACAGGAAATGTGCTCGGGAAACCAATCTCAGTGGTCGATACTCCGGGAATATTAGGGAGGAAGGACACAAAGAAGATTAAGAAGTACGGCACAGACAGTCAAAGAGCTGCTGGTGAAGTCCAGTCCCCTCCCAACCCAGGACCAACCTGATTCACCAGCTGACCGGAGGGTGGTGCTGATCGGTCTTCTCGGAGCTGGAAAAAGTTCCTCTGGGAACACCATCTTAGGATCAAATCGGTTTAAATCAGTCAGTGCTGAGACTGTCTCTAAGTCAGCAGAGGTTGAGGGCCGTCAGGTCACAGTGGTTGACACTCCAGGAATCACTGATCCAACCGGTAATTGCCTGTATGAGGGGATCAGGAAGTGGATAGCAGAGGCCAGTCCAGGACCACATGTCTTTGTTATTGTGGTCAGAATCGGCAGCATGTTTACAGCAGACATCAAACTGTTCAAGCTGCTGAAACAACTGTTTGAAAGAGATGCTCTGAAGTACTCCATGGTGCTTTTTACTCACGGAGACGAGCTGGGAGGTCAGTCCATTAATAATTTCATTGATTCCAACAAACATGTTGAAAGACCTGGTTGACATGTGTGGTAATAGATTCTGTGTGTTTGACAAcaaaaccataacaaacagagcCCAGGTCAGTGTCTTCCTGGAAAAAGTACATGAGATGTTCTCAGGTAACAATGGAGACCCAAACTGAACTAAAGAACGTGTCAGAAAGCAGTATAATAGGGTttcttaaaaacacatttatcaaGATAGCTAACAAAGCAGCAGGAgAAGACAATGCAGTAGTAAAAGCACTTAAACAAGTAGAAACAGTATTAGAAGGATTAGCAGCTGCGCAGCGCAACAGTAGAAAAGACAGGAGTAGCAGTGGGGGAATGGCTTGTCAGCAGCAGGAGTCGTATGAGCACGAGCACTCATGTGATGGGTTCTGTTTTATATGGCGTTATGTAATTAAAAGTTGATTTCAATCTGACTGCTTCGCTGTGTGGAAGAAAGAAATTAGGCAGAGTTTAAACTATTGGCGTGATTTTCAAACTCTGAACATGTAACACGTTTGAAGATAACTTGTCACTTGTTCAGAGTTTGAAGTGTaagtattttaatattttttgtctCTATCTTCCAGTGTTGGCGTTCTCATCAGGTAGAAACTCTATACTTTCAGACAACACATCATATAAACTAAGTAACTTGTTCTTGTTGTAGATTAACCATCAGTAACCACTGACCCTCTCTGCACTTataattaaaattattcatCCAAACTAAAGTCCTCCATCAGTGACACATCAATATCTCTGCCAATATCTCCATAAAACCTGTCTTTTTCCAGGACAAGAGGTTAACTAAGTGTCTATTAACAGGAATTAATAGACAACAGGCAGGATGGTTACCTCTGGAGTCCATTTATTCCCTGACAACAGATACCTCTAAGGTCCTTTTGTACCATAGTCCCTTACCAAATAACAGTTTGTAAGaccatttattaattattaattaataattaatttcattcagaccaaagatttgagATAAGATGAGTTAACATGTTGCAGCACGTCAGTCTGCATCTTCCTGAAAGCTGCCAGATCCCACCaattatttctctgattcacggcttggTTCTAACAACATTTGTTATATCACATTTTAATAAGAAAGTCAAATCTTACCTTCACTTAAATGAGTTATCATgaggttttatattattatattattgtgtgGTTGACCATATTTGATTTCCTTCTTTGTCGATGTGAGCTACCTTTATGTTAGGCatgtaatatacatatataaacttgttttcaagatatttttttatttgcttggtttgttgttttattattttgctggctttttgttatttaattttatatgcAGATATTGTTATCTTTATTTTCTGCATCTGtctatttttgttgttgaagaTTTGCCCTGCCTACTATAGTTTGCCCTCTTTCATAACTCAGGAAGAGTTTGTGGATAATGGAAGtggtataataataatccatttcattttattagatttggtttgtgtattttgtaatagattattgtgttaatgttgtgttaactgtaatattgtttttggtttgacctttgacctcttgtgtgtttgttcaaTCAGCTGAATCATCATTTATAACTTACTGTCAATATAATCATATTATACATTAGTTTGGATCACttattgttgtaaaagtttcaATATTTACAAGttattgattcttaatttcaaGCTTCTACTGAAAAATATCATAATCAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU219894 False 1134 TUCP 0.47 4 1383987 1424401
TU219895 True 2613 lncRNA 0.38 6 1381761 1423797

Neighbor

gene id symbol gene type direction distance location
ins ins,LOC108250678,LOC103130811,LOC106937878,LOC103476384 coding downstream 134796 1244526 ~ 1246965 (-)
nipal4 NA coding downstream 138597 1222848 ~ 1243164 (-)
LOC120544169 NA coding downstream 255680 1123379 ~ 1126081 (-)
LOC120544177 NA coding downstream 398033 983394 ~ 983728 (-)
LOC120544156 NA coding downstream 566172 806151 ~ 815589 (-)
LOC120544170 NA coding upstream 63002 1487403 ~ 1490956 (-)
LOC120544166 NA coding upstream 277375 1701776 ~ 1724485 (-)
LOC120544161 NA coding upstream 313920 1738321 ~ 1747929 (-)
LOC120544174 NA coding upstream 389013 1813414 ~ 1820635 (-)
apbb3 apbb3,LOC102778778 coding upstream 413175 1837576 ~ 1857594 (-)
G162397 NA non-coding downstream 19536 1361983 ~ 1362225 (-)
G162395 NA non-coding downstream 31698 1349369 ~ 1350063 (-)
LOC120544185 NA non-coding downstream 43904 1320310 ~ 1337857 (-)
G162360 NA non-coding downstream 67469 1310662 ~ 1314292 (-)
G162372 NA non-coding downstream 92412 1284949 ~ 1289349 (-)
G162403 NA non-coding upstream 29496 1453897 ~ 1454203 (-)
G162405 NA non-coding upstream 44474 1468875 ~ 1469120 (-)
G162745 NA non-coding upstream 99576 1523977 ~ 1524530 (-)
LOC120544188 NA non-coding upstream 255497 1679898 ~ 1695688 (-)
G162774 NA non-coding upstream 288105 1712506 ~ 1730625 (-)
G162396 NA other downstream 23238 1358186 ~ 1358523 (-)
G162358 NA other downstream 71145 1192802 ~ 1310616 (-)
G162359 NA other downstream 180327 1196113 ~ 1201434 (-)
G162352 NA other downstream 263073 1117073 ~ 1118688 (-)
chm chm,LOC104936337,LOC106675663,LOC101479632,LOC108251494 other downstream 491351 859932 ~ 890410 (-)
G162399 NA other upstream 12852 1437253 ~ 1440818 (-)
G162787 NA other upstream 411568 1835969 ~ 1836502 (-)
LOC120544171 NA other upstream 463228 1887629 ~ 1891423 (-)
LOC120543939 NA other upstream 917749 2342150 ~ 2651403 (-)
G162910 NA other upstream 1402688 2827089 ~ 2829594 (-)

Expression


Co-expression Network