G162789


Basic Information

Item Value
gene id G162789
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 1855149 ~ 1859905 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU220475
gtgtctctctgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtctctgtgtgtctctctgtgtgtgtctctgtgtgtctctgtgtgtgtgtgtgtctctgtgtctctctctgtgtgtctctgtgtgtctgtgtgtgtgtctctgtgtgtctctgtgtgtctctgtgtctctgtgtgtctctgtgtgtgtgtctctgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtctctgtg
>TU220476
gtctgtgtgtgtgtgtctctgtgtgtgtgtctgtgtgtctctgtgtgtgtgtgtctctgtgtgtctgtgtgtgtgtctctgtgtgtctctgtgtgtctctgtgtctctgtgtgtctctgtgtgtgtgtctctgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgctctgtgtgtgtgtctctgtgtgtgtgt
>TU220479
gtgtctctctgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtctctgtgtgtctctctgtgtgtgtgtgtgtctgtgtgtgtgtctctgtgtgtctctgtgtgtctctgtgtctctgtgtgtctctgtgtgtgtgtctctgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtctctgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtctctctgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtctctgtg
>TU220480
gtgtctctctgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtctctgtgtgtctctctgtgtgtgtctctgtgtgtctctgtgtgtctctgtgtctctgtgtgtctctgtgtgtgtgtctctgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtctctgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtctctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtctgtctgtgtgtgtgtctgtgt
>TU220482
gtgtctctctgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtgtgtctctgtgtgtgtgtgtgtctctgtgtctctctctgtgtgtctctgtgtgtctgtgtgtgtgtctctgtgtgtctctgtgtgtctctgtgtctctgtgtgtctctgtgtgtgtgtctctgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtctctgtgtgtctctgtgtgtgtgtctctgtgtgtgtgt
>TU220483
gtctgtgtgtgtgtgtctctgtgtgtgtgtctgtgtgtctctgtgtgtgtgtgtctctgtgtgtctgtgtgtgtgtctctgtgtgtctctgtgtgtctctgtgtctctgtgtgtctctgtgtgtgtgtctctgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtctctgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtctctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtctgtctgtgtgtgtgtctgtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU220475 False 387 lncRNA 0.50 3 1858851 1859905
TU220476 False 273 lncRNA 0.50 2 1859328 1859755
TU220479 True 441 lncRNA 0.50 6 1858851 1859905
TU220480 False 344 lncRNA 0.50 5 1855149 1859905
TU220482 False 278 lncRNA 0.50 3 1859328 1859905
TU220483 False 350 lncRNA 0.50 5 1855149 1859755

Neighbor

gene id symbol gene type direction distance location
LOC120544174 NA coding downstream 34514 1813414 ~ 1820635 (-)
LOC120544161 NA coding downstream 107220 1738321 ~ 1747929 (-)
LOC120544166 NA coding downstream 130664 1701776 ~ 1724485 (-)
LOC120544170 NA coding downstream 364193 1487403 ~ 1490956 (-)
LOC120544175 NA coding downstream 432941 1418067 ~ 1422208 (-)
LOC120543938 NA coding upstream 103800 1963705 ~ 1975306 (-)
LOC120543937 NA coding upstream 198774 2058679 ~ 2060641 (-)
st6gal1 st6gal1,LOC103354655 coding upstream 326875 2186780 ~ 2226456 (-)
LOC120543945 NA coding upstream 334455 2194360 ~ 2197235 (-)
trnay-gua_44 NA coding upstream 347215 2207120 ~ 2207208 (-)
G162792 NA non-coding downstream 11427 1843246 ~ 1843722 (-)
G162774 NA non-coding downstream 124524 1712506 ~ 1730625 (-)
LOC120544188 NA non-coding downstream 159461 1679898 ~ 1695688 (-)
G162745 NA non-coding downstream 330619 1523977 ~ 1524530 (-)
G162405 NA non-coding downstream 386029 1468875 ~ 1469120 (-)
G162799 NA non-coding upstream 76992 1936897 ~ 1938333 (-)
G162817 NA non-coding upstream 198174 2058079 ~ 2091770 (-)
G162819 NA non-coding upstream 206059 2065964 ~ 2068840 (-)
G162824 NA non-coding upstream 288320 2148225 ~ 2231430 (-)
G162844 NA non-coding upstream 320050 2179955 ~ 2220486 (-)
G162787 NA other downstream 18647 1835969 ~ 1836502 (-)
G162399 NA other downstream 414331 1437253 ~ 1440818 (-)
G162398 NA other downstream 430748 1381761 ~ 1424401 (-)
G162396 NA other downstream 496626 1358186 ~ 1358523 (-)
G162359 NA other downstream 653715 1196113 ~ 1201434 (-)
LOC120544171 NA other upstream 27724 1887629 ~ 1891423 (-)
LOC120543939 NA other upstream 482245 2342150 ~ 2651403 (-)
G162910 NA other upstream 967184 2827089 ~ 2829594 (-)
LOC120543772 NA other upstream 1178018 3037923 ~ 3095474 (-)
LOC120544249 alg8 other upstream 1318862 3178767 ~ 3233282 (-)

Expression


Co-expression Network