G162824



Basic Information


Item Value
gene id G162824
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 2148225 ~ 2231430 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU220532
cacacacgcacacacacacgcacacacacacacacacacacacacacacacacacaaacatgtaaacAATAGGACAGATGcataaacacttcattttcacTGCCAAAACATAAAGGAACGCCATGCCACTCACTTTATATTACatgttatacacacacacacacacacacacacacacacacacacacacacatatatatatatacacacacacacacacacacacacacatacacacacacactgatagaTGTGCCTGCTGTTCACACATACATAACCTCACGAGGATGTTCCCCTGTTCATCTCTAAAGCCCGTCTCAGTCAGAAACGTGTTGAGAAAGTGTGCCAAAAACATCGTACAGTTAAGAACAGTAcgggagtaaatgtacttagttacattttgaacGTTAagggagtaaatgtacttagttacattctgaACATTGAAAGTAGCTGTTTCAACTCGTCTGGACCCCCATCTTCTCATCTGGGACACAGATGGCCGAGAGGGTTTAACTGAAGACTGACGGACTGCACCTTTAAGAAACCTCTGGATGAacgtctttacacacacacacacacacacacacacacacacagacgcacacagacgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacagtcacacacagacgcacagacacagacacacacaacacacacgcatacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacagacagacacaaacacatacacacacacacacagacacacac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU220532 True 845 lncRNA 0.45 4 2148225 2231430

Neighbor


gene id symbol gene type direction distance location
LOC120543937 NA coding downstream 87584 2058679 ~ 2060641 (-)
LOC120543938 NA coding downstream 172919 1963705 ~ 1975306 (-)
apbb3 apbb3,LOC102778778 coding downstream 290631 1837576 ~ 1857594 (-)
LOC120544174 NA coding downstream 327590 1813414 ~ 1820635 (-)
LOC120544161 NA coding downstream 400296 1738321 ~ 1747929 (-)
ncf1 NA coding upstream 4092 2235522 ~ 2244087 (-)
LOC120544242 NA coding upstream 148137 2379567 ~ 2381215 (-)
LOC120543944 NA coding upstream 245421 2476851 ~ 2487119 (-)
pcf11 pcf11 coding upstream 582631 2814061 ~ 2855055 (-)
LOC120544248 NA coding upstream 623596 2855026 ~ 2868330 (-)
G162817 NA non-coding downstream 56455 2058079 ~ 2091770 (-)
G162819 NA non-coding downstream 79385 2065964 ~ 2068840 (-)
G162799 NA non-coding downstream 209892 1936897 ~ 1938333 (-)
G162789 NA non-coding downstream 288320 1855149 ~ 1859905 (-)
G162792 NA non-coding downstream 304503 1843246 ~ 1843722 (-)
G162851 NA non-coding upstream 3102 2234532 ~ 2286444 (-)
G162852 NA non-coding upstream 6854 2238284 ~ 2238984 (-)
G162833 NA non-coding upstream 16840 2248270 ~ 2251694 (-)
G162854 LOC103354655,LOC102298752,LOC102215500 non-coding upstream 20151 2251581 ~ 2347693 (-)
G162832 NA non-coding upstream 25846 2257276 ~ 2258865 (-)
LOC120544171 NA other downstream 256802 1887629 ~ 1891423 (-)
G162787 NA other downstream 311723 1835969 ~ 1836502 (-)
G162399 NA other downstream 707407 1437253 ~ 1440818 (-)
G162398 NA other downstream 723824 1381761 ~ 1424401 (-)
G162396 NA other downstream 789702 1358186 ~ 1358523 (-)
LOC120543939 NA other upstream 110720 2342150 ~ 2651403 (-)
G162910 NA other upstream 595659 2827089 ~ 2829594 (-)
LOC120543772 NA other upstream 806493 3037923 ~ 3095474 (-)
LOC120544249 alg8 other upstream 947337 3178767 ~ 3233282 (-)
LOC120544311 LOC101470105,LOC107380983,LOC102214284 other upstream 954540 3185970 ~ 3198248 (-)

Expression



Co-expression Network