G162875



Basic Information


Item Value
gene id G162875
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 2519840 ~ 2521948 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU220592
GAACGAAAGAGATCTGTGTCTGAATCCACTGTCGTCACGGAGTTAAAGGCAGTgaattccattaaaatggtggaggaggtggagatttgagaagcGCTACGCACGGGAGGTCCGGTCCAGAGAGGGATATTGGATCACATTGATTCTTCAGATCCCAGAGTCTTCCAGGGgttagagattcccagttcagtgggctgggtggcGAGCTACAGGATCGAGACTCAGAACTTATACGGATTGCCCTGGATTCCTTCTTcatggtggtaggacaaacagaaaccaaactcatatgggccccaacgttgaacatctctgaactcttgtcatcaaagaacaattgagctcatagaactgaaaagggtttattttatgagcgcactttattattttagttgttatttttcatacctgtgttttatctgtatatgtgtatgccatgtttctgtgtatattaatacacttctcaaacttta

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU220592 True 473 lncRNA 0.43 2 2519840 2521948

Neighbor


gene id symbol gene type direction distance location
LOC120543944 NA coding downstream 32721 2476851 ~ 2487119 (-)
LOC120544242 NA coding downstream 138625 2379567 ~ 2381215 (-)
ncf1 NA coding downstream 275753 2235522 ~ 2244087 (-)
trnae-cuc_26 NA coding downstream 289745 2230024 ~ 2230095 (-)
trnay-gua_44 NA coding downstream 312632 2207120 ~ 2207208 (-)
pcf11 pcf11 coding upstream 292113 2814061 ~ 2855055 (-)
LOC120544248 NA coding upstream 333078 2855026 ~ 2868330 (-)
LOC120543771 NA coding upstream 351281 2873229 ~ 2898462 (-)
LOC120543770 NA coding upstream 360407 2882355 ~ 2884569 (-)
LOC120543768 NA coding upstream 402534 2924482 ~ 2937752 (-)
G162874 NA non-coding downstream 3824 2515732 ~ 2516016 (-)
G162873 NA non-coding downstream 10551 2508997 ~ 2509289 (-)
G162866 NA non-coding downstream 74572 2428273 ~ 2445268 (-)
G162860 NA non-coding downstream 141224 2368495 ~ 2378616 (-)
G162854 LOC103354655,LOC102298752,LOC102215500 non-coding downstream 172147 2251581 ~ 2347693 (-)
G162878 NA non-coding upstream 48618 2570566 ~ 2570799 (-)
G162879 NA non-coding upstream 61521 2583469 ~ 2583703 (-)
G162884 NA non-coding upstream 83032 2604980 ~ 2605597 (-)
G162893 NA non-coding upstream 114728 2636676 ~ 2636912 (-)
G162902 NA non-coding upstream 158930 2680878 ~ 2681733 (-)
LOC120544171 NA other downstream 628417 1887629 ~ 1891423 (-)
G162787 NA other downstream 683338 1835969 ~ 1836502 (-)
G162399 NA other downstream 1079022 1437253 ~ 1440818 (-)
G162398 NA other downstream 1095439 1381761 ~ 1424401 (-)
G162396 NA other downstream 1161317 1358186 ~ 1358523 (-)
G162910 NA other upstream 305141 2827089 ~ 2829594 (-)
LOC120543772 NA other upstream 515975 3037923 ~ 3095474 (-)
LOC120544249 alg8 other upstream 656819 3178767 ~ 3233282 (-)
LOC120544311 LOC101470105,LOC107380983,LOC102214284 other upstream 664022 3185970 ~ 3198248 (-)
G163259 NA other upstream 1348377 3870325 ~ 3874115 (-)

Expression



Co-expression Network