G162908


Basic Information

Item Value
gene id G162908
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 2847321 ~ 2851404 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU220634
aagtgggatgcagccatcagtaattgGTTTGAATACAACTGTGTTTTTCCTATGACATGTCAAcctgtctgctgtgaaaaaagctccatacagcgatgtcagcgatagatttactaaacagccttggacctggaaaatATTTATACTGATGGAAAaagacaaacttggaaaaagacggtacgaagaaggaaggaaggaaggcaagaataggtaaCAAATGCTTAGAAAAGAAGAGAGACTAACttcaaaaaagcaataaaaacttGAACTTTGAAATAACACAcagaaggaaggcaacactagggcaacaaaagtgacaaagcagaaaaaaactttgaagaaaaagacggtagaaaaaagtaaggaagaaaggcaagaatgggtcaaaacaaacgacaaaaccttcaaaaaaaaaaggtaacaaacttcagaaatggcaacaaaaactttgaataaaagcCAGTAGAAGTAACTGtaacctgcagtcctccaaaggtcccctagggggacacgttgATATATTTATATCCAACTAAACATTTACAACATACTATTACAGAAGAAAAAACCTAATTAAACAACCTCTGTTAACTTCTGTCTACTTATTGGTAATTCAGAGGTAATCGTTTGAACCTAAAGTCAATGtgagtttttttatatttattacaaaGCTGCTTCACATAATTATTGACATCTCTTCTTAAAGAAGTTGGCTCGTCATCGTATCTATTGTCTGGCAATCTACCCAATCAAGGCGGCGATAAAGAGAAGATAAAACTTTGTCGTCTGGTCACGCAGAAAATGTTCTTGCGTAGTCAGCTCCGACAGTCAACATAAGTTTAAAAACCTCTCTATAGGGGGGTTGCCAGGTCTTAAGAAAGGTCTCAACGGCAGAGTTTACCCTCCACACAGTTTACAAGTCTTataatgtcggaaaaagtgatgaaggctttggaaaaaaaactaaaaggcgacaaaaacgttgaagaaaTTGCCCAAAAGAACCGTGAAAAAGTCAAGAAATCTCCGACTATCTACGGAGGCCCCGGGACATTATGGAGGCCCCGGGACATGCCTGCATGGATGAGAataggcaaaaaaaaatttttaattaaaaataaccttaaaataaggcaacaaaaacatggaaaaagtGTCccaaaaaaaccttgaaaaaggcgacaaaaaactCCCAAAAATTCCCCCAAAAAGCAACACACggcaaaaaaaattcaaaaaaaggacaaaaacgtcaaattgctgaaaaaaacgtcaaaagtcGGAAAAAGAGACAGTATGgggcgatttaaaaaaaaaaaaaaaggctacaaAACGTCAAAGAAATCACCCAAAAGAACCTTAaaagaataaacaaaaataggatatatatatataaataaataaataaataaataggtgacaaaaacacttgaaaaagtgtccaaaaaagGTGATCAAATCTCCTAAAAATCTCCcccaaaaaagcaacaaacggcaaaaaaaattgtccaaggacaaaaatgtcaaagagacaaagatttaaaaggcgacaaaaacgtgAAGAAATTGCTGGAAAGAACCTTgaaaaagatgacaaaaacatcagaagcAACTGTCGgggaaacaaagacaaacagtGAGGGGGAAATCCTAAAAGGCTACGAAACGTCAAAGAAATCACCCAAAGAACCCTGAAAGAATCAACAAAAATCTCCAACTATCTACggaggtcccgggacatgtcTGCATGGATGAGAATAGACAAAAAATAACCTTAAAAtaggcgacaaaaacattgaacaaAGCGACCAAAAAAACCTTAAAGGTGACAAATTCAcccaaaaaaagcaacaaactgcaataaaaatagacaaacatcaaaagagacaaagacttcgggtaaaaaaaaacaacctaaaagGTCGAAATTGCttaaaaaactttggaaaaaggtgacaaactcCTAAAAAATTACCTgggaaaaatgtgtgaaaacaTTGTACCAGAGCTAGACGGCCACAAAGGAGAGTAGAGGCGAGCAGGGACCATGTGATGGAAAAGCGCCATCTTAAGGGCTACAAAATGGCAAAGAAGTTAccccaaaaaatgttttaaaaatgatctttaaataaatgatctttcaaaataaaataaaataaaggcgACAAATGTTGAAGTTGCCCAAAAGAACCGTGAAAAAGTCAACAAATCTCCAACTGTCTACGGAGGTCCTGGGACATGTCTGCATGGATGAGAACAGAGAcaaaagcatttatttatttatttatttttttaaataaaataaaaataaccttttaaaataggcaacaaaaacattaaagtgtccaaaaaaaacctcaaaagATGACAAAAACTCCTAAAAATTCCCCTCAAAGCaacaaacagcaaaaaaaatgtttaaaaaaaaaaaagacaaaagagacaaatattTGAAAGATGACTAAAACGTCAAGAAATTGCTCAAAAGAACTTTGAAAAAGGGGAAAATTTAcctgaaaaaggcgacaaaaacgtcaaaagcaGCGGTCGTAAAAAGAGACAGACTAtgaaaaagagaggagggaaaaaaaacaaacctaagGCTACAAAACTGTCAAATTGCTCAAAAGAACCTTGAAATAGTCAGCAAAAATCTCCAACTATCTACGGGGGTCCCGGGACATGCCTGCATGGATGAGAATAGAcggaaaaaaacttaaaataggcgacaaaaacatttgtccgaaaaaggcgacaaactgcaaaaaaaaaatgtccaaaaacgtcGAGAGACAAAGACttcggggggaaaaaaactaaaaggtgACAAAACTTTGAAGAAATTGCTCAAAAGAACCTTGGAAAAAGGGGACAAACTCCTAAAAATTACCTGGAAAAATTGACCAAAAAAGGGACGAACTCCTAAAAAAATTACCTGGAAAAATTGACCAAAAAAGGGGACAAACTCCTAAAAATTACCTGGAAAGATTGACCAAAAAAGGGGACAAACTCTGAAAATTTACCTGGAAAAATTGACCAAAAAAGGGACAAACTCCTAAAAAATTACCTGGAAAAATTGACCAAAAAAGGGGACAAACTCCTAAAAAATCACCTGGAAAAATTGACCAAGAAAGGGACAAACTCCTAAAAAATTACCTGGAAAAATTGACCAAATATGGTGACAAACTCCTAGAAATTACCTGGAAAAATTGACCAAAAAAGGGACGAACTCCTAAAAAATTACCTGGAAAAATTGACCAAAAAAGGGGACAAACTCCTAAAAATTACCTGGAAAGATTGACCAAAAAAGGGGACAAACTCTGAAAATTTACCTGGAAAAATTGACCAAAAAAGGGGACAAACTCCTAAAAAATCACCTGGAAAAATTGACCAAGAAAGGGACAAACTCCTAAAAAATTACCTGGAAAAATTGACCAAATATGGTGACAAACTCCTAGAAATTACCTGGAAAAATTGACCAAAAAAGGGGACAAACTCCTAAAAAATTACCTGGAAAAATTGACCAAAAAAGGGGACAAACTCCTAGAAATTACCTGGAAAAATTGACCAAAAAAGGGGACAAACTCCTAGAAATTACCTGGAAAAATTGACCAAAAAAGGGACAAACTCCTAAAAATTACCTGGACAAATTGTCAAAACTCGTTGGATAAAAGCGGTTAACCTTTTGGGAGAAGGCCAGTTTTGGTTATTAGGGTTGTTACCCCCATCAGTAAATGGTTACCTATGGTTACGGTGGATTTTGACGTTTGCAGCCTAGATTATTCCCAGCCACTAGAAGCAGCCAGTCAGTGTGAACACGGTCGGTACATATTGTCTGGTGGCCATTGATGTTGGAGACGCGGCCTCTTCTATGGAGGCTCGGCTGAGTCAGCAGTTTGTCTCGGGCTGTTTTCGGTTTTTTACACTTCTACCGCCTGGCTGAAACGGaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU220634 True 3950 lncRNA 0.36 3 2847321 2851404

Neighbor

gene id symbol gene type direction distance location
LOC120543944 NA coding downstream 360202 2476851 ~ 2487119 (-)
LOC120544242 NA coding downstream 466106 2379567 ~ 2381215 (-)
ncf1 NA coding downstream 603234 2235522 ~ 2244087 (-)
trnae-cuc_26 NA coding downstream 617226 2230024 ~ 2230095 (-)
trnay-gua_44 NA coding downstream 640113 2207120 ~ 2207208 (-)
LOC120544248 NA coding upstream 3622 2855026 ~ 2868330 (-)
LOC120543771 NA coding upstream 21825 2873229 ~ 2898462 (-)
LOC120543770 NA coding upstream 30951 2882355 ~ 2884569 (-)
LOC120543768 NA coding upstream 73078 2924482 ~ 2937752 (-)
ncbp3 LOC102780188 coding upstream 218666 3070070 ~ 3086217 (-)
G162911 NA non-coding downstream 5587 2841304 ~ 2841734 (-)
G162904 NA non-coding downstream 163217 2683596 ~ 2684104 (-)
G162903 NA non-coding downstream 165114 2681807 ~ 2682207 (-)
G162902 NA non-coding downstream 165588 2680878 ~ 2681733 (-)
G162893 NA non-coding downstream 210409 2636676 ~ 2636912 (-)
G162922 NA non-coding upstream 62605 2914009 ~ 2914569 (-)
LOC120543774 NA non-coding upstream 178570 3029974 ~ 3035752 (-)
G162939 NA non-coding upstream 236517 3087921 ~ 3089697 (-)
G162940 NA non-coding upstream 238868 3090272 ~ 3090937 (-)
G162938 NA non-coding upstream 250048 3101452 ~ 3534641 (-)
G162910 NA other downstream 17727 2827089 ~ 2829594 (-)
LOC120543939 NA other downstream 195918 2342150 ~ 2651403 (-)
LOC120544171 NA other downstream 955898 1887629 ~ 1891423 (-)
G162787 NA other downstream 1010819 1835969 ~ 1836502 (-)
G162399 NA other downstream 1406503 1437253 ~ 1440818 (-)
LOC120543772 NA other upstream 186519 3037923 ~ 3095474 (-)
LOC120544249 alg8 other upstream 327363 3178767 ~ 3233282 (-)
LOC120544311 LOC101470105,LOC107380983,LOC102214284 other upstream 334566 3185970 ~ 3198248 (-)
G163259 NA other upstream 1018921 3870325 ~ 3874115 (-)
rnasekb rnasek,LOC107554319,LOC101475670 other upstream 1296459 4147863 ~ 4157624 (-)

Expression


Co-expression Network