G162938


Basic Information

Item Value
gene id G162938
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 3101452 ~ 3534641 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU220679
aaaaaaacctttttatttaaatggctACGCTCACATTTTGGGcgttttttttctgatgttttcgacattttttgacgcttgttttgacattttggggcgttgtatttcaacgtttttgtcagtttttctgtAAAATCgctttattttgacatttttgaagcTTCTTTCAACGTTTTCATAACTTTAACGAACTGAGCAGCTTCTATATAACAGgcctacaaacacacatatgtcCCTTTTTAAAATCACATGTCCAGGTAACAGAGCTGCCAGAACTTCTGTTATTCACAGATGTATTTCTAGGAGCGTATTTCATATTAAAAACTTAGAAAGTTAATAAAACAACTGGGCGTAGCGTAGCCTCCTTTAGAGTGTAAAGAAGGCTGTTTGGGCTCAGATTTCGATATGAAATCGGCCATTTaaataaagctttttttaaatgttctgcaaGACGAGACCAGTCCCCTTGGACCTTTAAAAGACTCACCCAAAGATGGACGGGTGAAGAGATCCTCCAATCCCCACCTCCATCCTAAAAGTACAACAAACTCAAACGATATCCCCCCTTTCAAAATAAGAGAAGAGACTCGCCACGTTTGGGATggactgtgattggctgtccaGCCTCCGAGCATCCAGCTGTTCTTTGTTTACTTCTTGATCCTTCAACGAAATCTTCTTTTGTGTGAAAGTTATGCAGAAAAACATGTTCATTATATTCATCACAAAGTTAACGTATTGGCACCCAGCACACTTTATCGATGTCCCAAAACATGTgtaacgttcaaaagtagttttttattattttagtcgtgcaacagaaaactcagattggacagagagtctagctaacagaactaatctccgtgatgctaaatatgtctttgaGCTGTGGAGATATCTAACTTTCATCCATCCTAAAACAAATCAGTTCATCACAGAATGAAGGGAGCCTCTCGTTTAGAGGTCTGTCTACAAACCTGTAGTCGATCAACAAGATCTGGtataccagtccctccagaaaaatgtgattatgcgaTTTGCATATCGCaattccagaaaaatgcgagttttcttttatttttttttaacctttatttattcaggggaggttcactgagaggcagcctctcttttgcaggaacgccctgatcacattcacacagttacacattcatactggaagctgcccagtaccaccacagtctgatctgatcacattcatactggaagctgcccagtacaaccacagtctgatctgatcacattcatactggaagctgcccagtaccaccacagtctgatctgaccacattcatactggaagctgcccagtaccaccacagtctgatctgatcacattcatactggaagctgcccagtacaaccacagtctgatctgatcacattcatactggaagctgcccagtacaaccacagtctgatctgatcacattcatactggaagctgcccagtaccaccccagtctgatcagcagctccactggagcggttggaggttaagggccttgctcaagggcacctcagtggtggtaatgagggaggggacaaagcgctgctctttcactttccccacccagattttatcctgctggtctggggattgaaccgacggtcacaagctcgcttctctaacctttaggccaccaccgCCCACTGTgagtttttgtgattgttgcacgGCAAAGATCCTTGATTATGAgtcacgttttcttaaaaaatgctgatggaatatgctctatatgatatttatgcagtttaatgcgatgaaattgcaggaacttgcaaaaactacagtttgatgacaaagagaaaaacagtgattccccccccccccaaacaacaacctgcttttcgatgatgttcacgtcacttcataacgttcccatggcaacaggaggaaatggctgctcttgtgtgacgTAAACAcaaaatttttcaactttctgctaaaatatattatgggacttttttattattattattattattatgggatgcagggctcttgagggacttattgtaattgttggggctttgtaaattatagagtgtggtctagacctactctatctgtaaagtgcctcgagataacctatgttatgatttgatactatgaataaaattgaattgaattattaaatcatgcaagcctgcacgcatattttgcgcggaaatcggcaatttatgcagtGAAAGTGCGGCGAATTTGAAAAAATGCCCCCacccccccgcataaatatgcagactttggctgattatgcgatgaattatgcgatcgcataatcacatctttctggaaggactgaattCAACGCATCATCAGCCAAAGCTTGCACGATGTCATAACCACTGCATTTTCGTTGCCAAAAAAGTCctgtaatatatcttagcagaaagttgaaaaatgttgcgtttacttcacacaagagcagccatttagcccctgttgccatgggaacgttaggAAGTGACGTCATTACACGACGTGAACTTCATCGAAAAGCAGCGTGCTGGTTCTCtctttcatcaaactgcagtttttgcaatttcatcgaataaaattgcataaatatccctcatattccatcgcatattttaagaaaacgtgactcataatcaaggatttttgccctcaactatcacaaaaaaactcctctcttttctggaaggactggtataTTAATAGACACGTTGAAATATCCAGTTTCCACGAACGCAGCACGCCTTGAGCGTCCTTCATCGGAAGGTGAACTCTGTACCGTATATCGTGTGAATACAGTTGGAGGCCGGTTGCGTGTCTGAAAGCCGAGCATGCTGGGAGTTCTGCTGATCCTCTTAATGCTGTTTAAAGGCTCAGCAGCCCGATTCACAGACAGCATCACCTTCACACACTGTTAGATTTCTTAAAGACGATCATCCTGCCGGCTGGAGGAGCTACATGTGAACTTAAGGCTGCAGAAACTCTCTCAAAACTCAGACAAACTGCAGCTTTACTTTCATAAAACTACTTAAAAAACAGGACAGGAAATCTGCTTTCTATTTCTGTCACTACGGAGCCGAgcggtgtgttcagggacaaAATAATCCTCAGCAACTGGCTCATCCAGGCCAAACCAGGACAAACAAGGCCAAACCAGGCCAAACCACTTAACAGGCAggtagaaagaaagacagagagacatacagacaggcagagagagagagagacagacaaccagaaagacagagagagagagagagagagagagagagacagacagacagacaggcagacaggcagacaggcaggcaggcaggcaggcaggcagacatacagagagagacagaaagacagacactgcattttggccctataaatagctTGATTAGCttgatcaatcaccaaataacgcaggatttaatcaaataatcatcAACAACTGGCTCAACCAAGGCCATACCAGGCCAAACCAGGCCAAACCAGGCCAGACCAGGCTGTTTTAAAGCTACTCTTTAACAGGGGAGAACAATGTTATCGTTTCAATCCTCAACACCAATATTATCAATGCAAAGTGAAAACAAACCGATACAAatcttattttttgttatttaaaagatgcgcctttattttgaaattcccactTTAAATGTATTATCGTTTTATGACAAGAGTGAACACGGTCCCACTGTCCAAAGCATCGGTATAATACCATATAGTGATGAACGCGTAAATGCACACCCCTACTATGTCTCTAACTTGTGATTTCTCTTATTTTGAAGTTAAAAAGTAATCTAATGAATGCTTTGAgtgtttttacttttatacgCTGGTGAGTGAGACGCGATCGAGGCGACAGAGGGGAGCGTCTGCACACgtttgatgaagaaaacttgatTTATGGACTCAGATTTTATGGTTAGAGGCCATTTCTCCTTAAAGCTGTGAACTGGTACACGTACAGACAGATCTGATCTGCAGCTTAGCATCGATGCTAACACTTCTTATTGTGCAATAGagaaacatttacagtaaaaactcTAAGTTCATTTCAACagatcatgttttgttttgccttATCAATAAAGTTTTTAAAACTTaaaaaaaaaaaaaa
>TU220680
gagagagagagagagagacagacagacagacagacagacagacaggcaggcaggcaggcaggcaggcagacatacagagagagacagaaagacagacactgcattttggccctataaatagctTGATTAGCttgatcaatcaccaaataacgcaggatttaatcaaataatcatcAACAACTGGCTCAACCAAGGCCATACCAGGCCAAACCAGGCCAAACCAGGCCAGACCAGGCTGTTTTAAAGCTACTCTTTAACAGGGGAGAACAATGTTATCGTTTCAATCCTCAACACCAATATTATCAATGCAAAGTGAAAACAAACCGATACAAatcttattttttgttatttaaaagatgcgcctttattttgaaattcccactTTAAATGTATTATCGTTTTATGACAAGAGTGAACACGGTCCCACTGTCCAAAGCATCGGTATAATACCATATAGTGATGAACGCGTAAATGCACACCCCTACTATGTCTCTAACTTGTGATTTCTCTTATTTTGAAGTTAAAAAGTAATCTAATGAATGCTTTGAgtgtttttacttttatacgCTGGTGAGTGAGACGCGATCGAGGCGACAGAGGGGAGCGTCTGCACACgtttgatgaagaaaacttgatTTATGGACTCAGATTTTATGGTTAGAGGCCATTTCTCCTTAAAGCTGTGAACTGGTACACGTACAGACAGATCTGATCTGCAGCTTAGCATCGATGCTAACACTTCTTATTGTGCAATAGagaaacatttacagtaaaaactcTAAGTTCATTTCAACagatcatgttttgttttgccttATCAATAAAGTTTTTAAAACTTaaaaaaaaaaaaaa
>TU220683
aaaaaaacctttttatttaaatggctACGCTCACATTTTGGGcgttttttttctgatgttttcgacattttttgacgcttgttttgacattttggggcgttgtatttcaacgtttttgtcagtttttctgtAAAATCgctttattttgacatttttgaagcTTCTTTCAACGTTTTCATAACTTTAACGAACTGAGCAGCTTCTATATAACAGgcctacaaacacacatatgtcCCTTTTTAAAATCACATGTCCAGGTAACAGAGCTGCCAGAACTTCTGTTATTCACAGATGTATTTCTAGGAGCGTATTTCATATTAAAAACTTAGAAAGTTAATAAAACAACTGGGCGTAGCGTAGCCTCCTTTAGAGTGTAAAGAAGGCTGTTTGGGCTCAGATTTCGATATGAAATCGGCCATTTaaataaagctttttttaaatgttctgcaaGACGAGACCAGTCCCCTTGGACCTTTAAAAGACTCACCCAAAGATGGACGGGTGAAGAGATCCTCCAATCCCCACCTCCATCCTAAAAGTACAACAAACTCAAACGATATCCCCCCTTTCAAAATAAGAGAAGAGACTCGCCACGTTTGGGATggactgtgattggctgtccaGCCTCCGAGCATCCAGCTGTTCTTTGTTTACTTCTTGATCCTTCAACGAAATCTTCTTTTGTGTGAAAGTTATGCAGAAAAACATGTTCATTATATTCATCACAAAGTTAACGTATTGGCACCCAGCACACTTTATCGATGTCCCAAAACATGTgtaacgttcaaaagtagttttttattattttagtcgtgcaacagaaaactcagattggacagagagtctagctaacagaactaatctccgtgatgctaaatatgtctttgaGCTGTGGAGATATCTAACTTTCATCCATCCTAAAACAAATCAGTTCATCACAGAATGAAGGGAGCCTCTCGTTTAGAGGTCTGTCTACAAACCTGTAGTCGATCAACAAGATCTGGtataccagtccctccagaaaaatgtgattatgcgaTTTGCATATCGCaattccagaaaaatgcgagttttcttttatttttttttaacctttatttattcaggggaggttcactgagaggcagcctctcttttgcaggaacgccctgatcacattcacacagttacacattcatactggaagctgcccagtaccaccacagtctgatctgatcacattcatactggaagctgcccagtacaaccacagtctgatctgatcacattcatactggaagctgcccagtaccaccacagtctgatctgaccacattcatactggaagctgcccagtaccaccacagtctgatctgatcacattcatactggaagctgcccagtacaaccacagtctgatctgatcacattcatactggaagctgcccagtacaaccacagtctgatctgatcacattcatactggaagctgcccagtaccaccccagtctgatcagcagctccactggagcggttggaggttaagggccttgctcaagggcacctcagtggtggtaatgagggaggggacaaagcgctgctctttcactttccccacccagattttatcctgctggtctggggattgaaccgacggtcacaagctcgcttctctaacctttaggccaccaccgCCCACTGTgagtttttgtgattgttgcacgGCAAAGATCCTTGATTATGAgtcacgttttcttaaaaaatgctgatggaatatgctctatatgatatttatgcagtttaatgcgatgaaattgcaggaacttgcaaaaactacagtttgatgacaaagagaaaaacagtgattccccccccccccaaacaacaacctgcttttcgatgatgttcacgtcacttcataacgttcccatggcaacaggaggaaatggctgctcttgtgtgacgTAAACAcaaaatttttcaactttctgctaaaatatattatgggacttttttattattattattattattatgggatgcagggctcttgagggacttattgtaattgttggggctttgtaaattatagagtgtggtctagacctactctatctgtaaagtgcctcgagataacctatgttatgatttgatactatgaataaaattgaattgaattattaaatcatgcaagcctgcacgcatattttgcgcggaaatcggcaatttatgcagtGAAAGTGCGGCGAATTTGAAAAAATGCCCCCacccccccgcataaatatgcagactttggctgattatgcgatgaattatgcgatcgcataatcacatctttctggaaggactgaattCAACGCATCATCAGCCAAAGCTTGCACGATGTCATAACCACTGCATTTTCGTTGCCAAAAAAGTCctgtaatatatcttagcagaaagttgaaaaatgttgcgtttacttcacacaagagcagccatttagcccctgttgccatgggaacgttaggAAGTGACGTCATTACACGACGTGAACTTCATCGAAAAGCAGCGTGCTGGTTCTCtctttcatcaaactgcagtttttgcaatttcatcgaataaaattgcataaatatccctcatattccatcgcatattttaagaaaacgtgactcataatcaaggatttttgccctcaactatcacaaaaaaactcctctcttttctggaaggactggtataTTAATAGACACGTTGAAATATCCAGTTTCCACGAACGCAGCACGCCTTGAGCGTCCTTCATCGGAAGGTGAACTCTGTACCGTATATCGTGTGAATACAGTTGGAGGCCGGTTGCGTGTCTGAAAGCCGAGCATGCTGGGAGTTCTGCTGATCCTCTTAATGCTGTTTAAAGGCTCAGCAGCCCGATTCACAGACAGCATCACCTTCACACACTGTTAGATTTCTTAAAGACGATCATCCTGCCGGCTGGAGGAGCTACATGTGAACTTAAGGCTGCAGAAACTCTCTCAAAACTCAGACAAACTGCAGCTTTACTTTCATAAAACTACTTAAAAAACAGGACAGGAAATCTGCTTTCTATTTCTGTCACTACGGAGCCGAgcggtgtgttcagggacaaAATAATCCTCAGCAACTGGCTCATCCAGGCCAAACCAGGACAAACAAGGCCAAACCAGGCCAAACCACTTAACAGGCAggtagaaagaaagacagagagacatacagacaggcagagagagagagagacagacaaccagaaagacagagagagagagagagagagagacagacagacagaca
>TU220686
aaaaaaacctttttatttaaatggctACGCTCACATTTTGGGcgttttttttctgatgttttcgacattttttgacgcttgttttgacattttggggcgttgtatttcaacgtttttgtcagtttttctgtAAAATCgctttattttgacatttttgaagcTTCTTTCAACGTTTTCATAACTTTAACGAACTGAGCAGCTTCTATATAACAGgcctacaaacacacatatgtcCCTTTTTAAAATCACATGTCCAGGTAACAGAGCTGCCAGAACTTCTGTTATTCACAGATGTATTTCTAGGAGCGTATTTCATATTAAAAACTTAGAAAGTTAATAAAACAACTGGGCGTAGCGTAGCCTCCTTTAGAGTGTAAAGAAGGCTGTTTGGGCTCAGATTTCGATATGAAATCGGCCATTTaaataaagctttttttaaatgttctgcaaGACGAGACCAGTCCCCTTGGACCTTTAAAAGACTCACCCAAAGATGGACGGGTGAAGAGATCCTCCAATCCCCACCTCCATCCTAAAAGTACAACAAACTCAAACGATATCCCCCCTTTCAAAATAAGAGAAGAGACTCGCCACGTTTGGGATggactgtgattggctgtccaGCCTCCGAGCATCCAGCTGTTCTTTGTTTACTTCTTGATCCTTCAACGAAATCTTCTTTTGTGTGAAAGTTATGCAGAAAAACATGTTCATTATATTCATCACAAAGTTAACGTATTGGCACCCAGCACACTTTATCGATGTCCCAAAACATGTgtaacgttcaaaagtagttttttattattttagtcgtgcaacagaaaactcagattggacagagagtctagctaacagaactaatctccgtgatgctaaatatgtctttgaGCTGTGGAGATATCTAACTTTCATCCATCCTAAAACAAATCAGTTCATCACAGAATGAAGGGAGCCTCTCGTTTAGAGGTCTGTCTACAAACCTGTAGTCGATCAACAAGATCTGGtataccagtccctccagaaaaatgtgattatgcgaTTTGCATATCGCaattccagaaaaatgcgagttttcttttatttttttttaacctttatttattcaggggaggttcactgagaggcagcctctcttttgcaggaacgccctgatcacattcacacagttacacattcatactggaagctgcccagtaccaccacagtctgatctgatcacattcatacctggaagctgcccagtaccaccacagtctgatctgaccacattcatactggaagctgcccagtaccaccacagtctgatctgatcacattcatactggaagctgcccagtacaaccacagtctgatctgatcacattcatactggaagctgcccagtacaaccacagtctgatctgatcacattcatactggaagctgcccagtaccaccccagtctgatcagcagctccactggagcggttggaggttaagggccttgctcaagggcacctcagtggtggtaatgagggaggggacaaagcgctgctctttcactttccccacccagattttatcctgctggtctggggattgaaccgacggtcacaagctcgcttctctaacctttaggccaccaccgCCCACTGTgagtttttgtgattgttgcacgGCAAAGATCCTTGATTATGAgtcacgttttcttaaaaaatgctgatggaatatgctctatatgatatttatgcagtttaatgcgatgaaattgcaggaacttgca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU220679 True 4115 lncRNA 0.41 2 3145936 3160907
TU220680 False 852 lncRNA 0.38 3 3145936 3534641
TU220683 False 3285 lncRNA 0.42 2 3101452 3160907
TU220686 False 1762 lncRNA 0.42 2 3159100 3160907

Neighbor

gene id symbol gene type direction distance location
ncbp3 LOC102780188 coding downstream 15235 3070070 ~ 3086217 (-)
LOC120543768 NA coding downstream 163700 2924482 ~ 2937752 (-)
LOC120543771 NA coding downstream 202990 2873229 ~ 2898462 (-)
LOC120543770 NA coding downstream 216883 2882355 ~ 2884569 (-)
LOC120544248 NA coding downstream 233122 2855026 ~ 2868330 (-)
LOC120543677 NA coding upstream 55670 3590311 ~ 3592122 (-)
LOC120543676 NA coding upstream 63070 3597711 ~ 3599732 (-)
LOC120543685 LOC106675582 coding upstream 68803 3603444 ~ 3604114 (-)
LOC120543675 LOC100703014,LOC103354664,LOC102796844,LOC102305065,LOC101476254 coding upstream 91089 3625730 ~ 3639477 (-)
LOC120543681 NA coding upstream 129188 3663829 ~ 3664776 (-)
G162940 NA non-coding downstream 10515 3090272 ~ 3090937 (-)
G162939 NA non-coding downstream 11755 3087921 ~ 3089697 (-)
LOC120543774 NA non-coding downstream 65700 3029974 ~ 3035752 (-)
G162922 NA non-coding downstream 186883 2914009 ~ 2914569 (-)
G162908 NA non-coding downstream 250048 2847321 ~ 2851404 (-)
trnas-uga_24 NA non-coding upstream 3744 3538385 ~ 3538466 (-)
trnav-uac_20 NA non-coding upstream 6310 3540951 ~ 3541023 (-)
G163029 NA non-coding upstream 33499 3568140 ~ 3568653 (-)
G163032 NA non-coding upstream 37364 3572005 ~ 3572253 (-)
G163055 NA non-coding upstream 125321 3659962 ~ 3660294 (-)
LOC120543772 NA other downstream 5978 3037923 ~ 3095474 (-)
G162910 NA other downstream 271858 2827089 ~ 2829594 (-)
LOC120543939 NA other downstream 450049 2342150 ~ 2651403 (-)
LOC120544171 NA other downstream 1210029 1887629 ~ 1891423 (-)
G162787 NA other downstream 1264950 1835969 ~ 1836502 (-)
G163259 NA other upstream 335684 3870325 ~ 3874115 (-)
rnasekb rnasek,LOC107554319,LOC101475670 other upstream 613222 4147863 ~ 4157624 (-)
LOC120544555 siah2,LOC101471392,LOC102786130 other upstream 747132 4281773 ~ 4821872 (-)
G163334 NA other upstream 767925 4302566 ~ 4304048 (-)
G163315 NA other upstream 800202 4334843 ~ 4820499 (-)

Expression


Co-expression Network