LOC120544249 (alg8)


Basic Information

Item Value
gene id LOC120544249
gene name alg8
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 3178767 ~ 3233282 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU220724
tatatatatatctatctctctctctcaagtcCTTGATACTGTTTAAAACAAAGTCCGTTTACAAGTTAAGGTAGCACCAGATTTACTTGTTTAATAAATGTACCTCATAGTGTCATCAACAAACttactcacacacaggcacacttgcacactcacatgcacacactcaaacgcacaaagacacacacacacagagacacacacactcatacacagacacacacacacacataggcacacttgcacacacacgcaaactcacacgcacactcacacacacacacacaaagacacacacacacacacacaaagacacacacacacacaatcacacacacgattggatgcaggaaaaaacgcagatgagacctacaggatgacctaaattgaggacagctacttaattAGCTGCCCATCAAAGTGTGTCTGATGCTGCTGTTCACCATCTACTCCTTCACTGCTCTGAGGACCCTCCACAGtggTCAGGGCTCTCTGCTACGTCCTCTGGAGTGCGTCTACCTGCTGGGACTGGTCGCCGTGGCGTTCGCCTGCGAGGTCGCCTTCCCTCTGTCGCCGTGGCAACAGAGGCTGCCGTTCCTCCCCCTGCTGGCGACCTCAGTGTACTGCTCGCTGGGCGTCTGCTACTCCTTCCTGCGTCTCTACGCCACGCTGCTGCGGCCAGACGGGAAGCCCAAACAACCGTGAGCTGAAGGACCGCAGGTTAGATTCCCTCCTAGACCACACCGGCACTCTCACAGAGGACCACTCAGACTCACCGACCAATCAGGACCTCACAGAGAACTGCTCAGACTCACCGACCAATCAGGACCTCACAGAGGACCGCTCGCACTCACCGACCAATCAGGACCTCACAGAGAACAGCTCAGACTCACCGACCAATCAGGACCTCACAGAGAACTGCTCCCACTCACCGACCAATCAGGACCTCACAGAGAACTGCTCCCACTCACCGACCAATCAGGTCTGAGTTTACTTACAATACgtaaagtacacacacacacacacacacacacacacacacacacacacacacacacacatacacacacacacacacacacacacacacatacacacacacacacacacacacacacacacacacacacacacatacacacacacacacacacacagacacatacacatacacacagacacacacaaacacacacaaacagacctCCAGGTGGATAAAACCAACGCACCACTGGTGAAGAACTACTTCCTGACTTTATTAAGTGAACGTGGACCAAAACAGAACTGAGAGA
>TU220727
tctgtgtattgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttccatctgggtgtacgtgtgtgtgtattatgtgtgttcCGCTCCCTCCAGGTGCTGTCTCGTCTCTTCCCCTTTAAGCGAGGCCTCTGCCACGCCTACTGGGCCCCAAACATCTGGGCGCTCTACAACACGCTGGATAAAATCCTGGCCACGCTCGGTGTTCGTGTGAAGCTGCTGCAGGAGGCGGAGCTTCCTCGAGCCTCCATGACGGGCGGCTTGGTTCAGGAGTTCCAGCACGCGGTCCTCCCCTCCATCACTCCCTCCATCACTCTCATCTGCACTCTGCTCTCCATCCTGGTGAGTcacagcagagaaacagagCTGTGGGGGggtgtcttgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgcctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctctctctctctctctctgtctttctggttgtctgtctctctctctctgcctgtctgtatgtctctctgtctttctttctaccTGCCTGTTAAGTGGTTTGGCCTGGTTTGGCCTTGTTTGTCCTGGTTTGGCCTGGATGAGCCAGTTGCTGAGGATTATTttgtccctgaacacaccgcTCGGCTCCGTAGTGACAGAAATAGAAAGCAGATTTCCTGTCCTGTTTTTT
>TU220728
tctgtgtattgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttccatctgggtgtacgtgtgtgtgtattatgtgtgttcCGCTCCCTCCAGGTGCTGTCTCGTCTCTTCCCCTTTAAGCGAGGCCTCTGCCACGCCTACTGGGCCCCAAACATCTGGGCGCTCTACAACACGCTGGATAAAATCCTGGCCACGCTCGGTGTTCGTGTGAAGCTGCTGCAGGAGGCGGAGCTTCCTCGAGCCTCCATGACGGGCGGCTTGGTTCAGGAGTTCCAGCACGCGGTCCTCCCCTCCATCACTCCCTCCATCACTCTCATCTGCACTCTGCTCTCCATCCTGGTGAGTcacagcagagaaacagagCTGTGGGGGggtgtcttgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtgtgagtgtctgtctgtctgtctgtctgtgtgagtgtgtgcatgctcgtgcatgcttgtgtgtgccTGAGTGTGGTGTGCGTGcgtatgtttctctgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtcttt
>TU220739
GGTTGGGTCTGCTGTGGTGGAGTCTGTCTGTGGGACCTGATGAGATAAAGTCAGCTGAGAGGAGACTCCTGGAGAAAACCTACCCAGATCAGATGGAGGAGCAGCTCCAGATGCAGCAGGGATTCCTGGAGAAGTTCACCACCTCTCCAGCCTTCCTGAAGACCTCCAGGCTGGGCTCGTACCGCTTCACCTTCCCCCTGGAGGAACTGCTGGAGGCCTACAGCAAACAGtttTGCTCCGGCGATAAGCCCGTCATGAAGGTGTTTAAGACAAGCCTGTATATACAGGAAGTGAATTACGTTGTGCTGGTCCACAGTCCAGACCAGGACCAGTTCTCTGACTATCCTTTGCTGAAAGACCAGCCAGACACTGTCTGCACTTACAGAGACGGCTGCTTCATCTGGAGGCCTGAGGCCATGAGTGAGACACACAGATATGAGTTGATCGTGGGACCTGATCAGATGGAAGTGAAGGAGCTGAGTCGTAGCCAAACGGAGTTATATGTTTGGGATAATGTCTCCATCGCCCTGCATGTGCCGAATAAACAGgtgctGCACTTTGATGCCGGCCGACTGAGAGAGAACCTCAAGTTCTGCAGTGAAGGATATCCTGGACTACATGGTGCCACATTCCCAACAGCTGAGGAGCTTGTTAATGAATTGTGGCCTGGC
>XM_039777882.1
ATGAAGATGGACTGGTCCTCTGGGTTGGGTCTGCTGTGGTGGAGTCTGTCTGTGGGACCTGATGAGATAAAGTCAGCTGAGAGGAGACTCCTGGAGAAAACCTACCCAGATCAGATGGAGGAGCAGCTCCAGATGCAGCAGGGATTCCTGGAGAAGTTCACCACCTCTCCAGCCTTCCTGAAGACCTCCAGGCTGGGCTCGTACCGCTTCACCTTCCCCCTGGAGGAACTGCTGGAGGCCTACAGCAAACAGtttTGCTCCGGCGATAAGCCCGTCATGAAGGTGTTTAAGACAAGCCTGTATATACAGGAAGTGAATTACGTTGTGCTGGTCCACAGTCCAGACCAGGACCAGTTCTCTGACTATCCTTTGCTGAAAGACCAGCCAGACACTGTCTGCACTTACAGAGACGGCTGCTTCATCTGGAGGCCTGAGGCCATGAGTGAGACACACAGATATGAGTTGATCGTGGGACCTGATCAGATGGAAGTGAAGGAGCTGAGTCGTAGCCAAACGGAGTTATATGTTTGGGATAATGTCTCCATCGCCCTGCATGTGCCGAATAAACAGgtgctGCACTTTGATGCCGGCCGACTGAGAGAGAACCTCAAGTTCTGCAGTGAAGGATATCCTGGACTACATGtgttcCGCTCCCTCCAGGTGCTGTCTCGTCTCTTCCCCTTTAAGCGAGGCCTCTGCCACGCCTACTGGGCCCCAAACATCTGGGCGCTCTACAACACGCTGGATAAAATCCTGGCCACGCTCGGTGTTCGTGTGAAGCTGCTGCAGGAGGCGGAGCTTCCTCGAGCCTCCATGACGGGCGGCTTGGTTCAGGAGTTCCAGCACGCGGTCCTCCCCTCCATCACTCCCTCCATCACTCTCATCTGCACTCTGCTCTCCATCCTGGTGAGTcacagcagagaaacagagCTCCGGGCGGCGTCCATCTGGTGGCGTCCCCGCGGCGCTCGCGGCTTCCTGCGCTGCCTGCTGCTCTGCGCTCTCGGCTCCTTCGTGTTCGGCTGGCACGTCCACGAGAAGGCCATCCTCATGGCCATCCTGCCTCTCAGcATCCTGGCGGTGGAGAACAGAGAGGATGCTGGGATATTCCTGGTTCTGACCACCACGCACTACTCTGTTCCCCTGCTCTCACCCCGCAGGTAACAGCCACTATACACGATATAGGAGCTGCCCATCAAAGTGTGTCTGATGCTGCTGTTCACCATCTACTCCTTCACTGCTCTGAGGACCCTCCACAGtggTCAGGGCTCTCTGCTACGTCCTCTGGAGTGCGTCTACCTGCTGGGACTGGTCGCCGTGGCGTTCGCCTGCGAGGTCGCCTTCCCTCTGTCGCCGTGGCAACAGAGGCTGCCGTTCCTCCCCCTGCTGGCGACCTCAGTGTACTGCTCGCTGGGCGTCTGCTACTCCTTCCTGCGTCTCTACGCCACGCTGCTGCGGCCAGACGGGAAGCCCAAACAACCGTGAGCTGAAGGACCGCAGGTTAGATTCCCTCCTAGACCACACCGGCACTCTCACAGAGGACCACTCAGACTCACCGACCAATCAGGACCTCACAGAGAACTGCTCAGACTCACCGACCAATCAGGACCTCACAGAGGACCGCTCGCACTCACCGACCAATCAGGACCTCACAGAGAACAGCTCAGACTCACCGACCAATCAGGACCTCACAGAGAACTGCTCCCACTCACCGACCAATCAGGACCTCACAGAGAACTGCTCCCACTCACCGACCAATCAGGTCTGAGTTTACTTACAATACgtaaagtacacacacacacacacacacacacacacacacacacacacacacacacacatacacacacacacacacacacacacacacatacacacacacacacacacacacacacacacacacacacacacatacacacacacacacacacacagacacatacacatacacacagacacacacaaacacacacaaacagacctCCAGGTGGATAAAACCAACGCACCACTGGTGAAGAACTACTTCCTGACTTTATTAAGTGAACGTGGACCAAAACAGAACTGAGAGACATTCATAATGTCTGTTTTTCTACGTTTACAATTAAAAGATGAATTCATCTC

Function

symbol description
alg8 Predicted to enable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase activity. Predicted to be involved in oligosaccharide-lipid intermediate biosynthetic process and protein N-linked glycosylation. Predicted to be located in endoplasmic reticulum. Predicted to be active in endoplasmic reticulum membrane. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation Ih and polycystic liver disease. Orthologous to human ALG8 (ALG8 alpha-1,3-glucosyltransferase).

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0005789 endoplasmic reticulum membrane cellular_component
GO:0016758 transferase activity, transferring hexosyl groups molecular_function

KEGG:

id description
K03849 ALG8; alpha-1,3-glucosyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
TU220724 False 1292 lncRNA 0.50 4 3209026 3212923
TU220727 False 736 TUCP 0.53 3 3178767 3217555
TU220728 False 599 lncRNA 0.55 2 3216065 3217555
TU220739 False 671 TUCP 0.52 4 3227870 3232004
XM_039777882.1 True 2124 mRNA 0.55 11 3208974 3233282

Neighbor

gene id symbol gene type direction distance location
ncbp3 LOC102780188 coding downstream 92550 3070070 ~ 3086217 (-)
LOC120543768 NA coding downstream 241015 2924482 ~ 2937752 (-)
LOC120543771 NA coding downstream 280305 2873229 ~ 2898462 (-)
LOC120543770 NA coding downstream 294198 2882355 ~ 2884569 (-)
LOC120544248 NA coding downstream 310437 2855026 ~ 2868330 (-)
LOC120575705 NA coding upstream 114338 3347620 ~ 3354553 (-)
trnad-guc_8 NA coding upstream 171905 3405187 ~ 3405258 (-)
trnav-aac_3 NA coding upstream 172748 3406030 ~ 3406102 (-)
trnav-cac NA coding upstream 176524 3409806 ~ 3409878 (-)
trnav-cac_1 NA coding upstream 183084 3416366 ~ 3416438 (-)
G162954 NA non-coding downstream 12881 3163483 ~ 3165886 (-)
G162945 NA non-coding downstream 43761 3134386 ~ 3135006 (-)
G162930 NA non-coding downstream 63892 3105062 ~ 3114875 (-)
G162940 NA non-coding downstream 87830 3090272 ~ 3090937 (-)
G162939 NA non-coding downstream 89070 3087921 ~ 3089697 (-)
G162967 NA non-coding upstream 50061 3283343 ~ 3285678 (-)
G162970 NA non-coding upstream 55777 3289059 ~ 3307952 (-)
G162981 NA non-coding upstream 103229 3336511 ~ 3339110 (-)
G162913 NA non-coding upstream 111393 3344675 ~ 3346908 (-)
LOC120543535 NA non-coding upstream 129744 3363026 ~ 3365172 (-)
LOC120543772 NA other downstream 83293 3037923 ~ 3095474 (-)
G162910 NA other downstream 349173 2827089 ~ 2829594 (-)
LOC120543939 NA other downstream 527364 2342150 ~ 2651403 (-)
LOC120544171 NA other downstream 1287344 1887629 ~ 1891423 (-)
G162787 NA other downstream 1342265 1835969 ~ 1836502 (-)
G163259 NA other upstream 637043 3870325 ~ 3874115 (-)
rnasekb rnasek,LOC107554319,LOC101475670 other upstream 914581 4147863 ~ 4157624 (-)
LOC120544555 siah2,LOC101471392,LOC102786130 other upstream 1048491 4281773 ~ 4821872 (-)
G163334 NA other upstream 1069284 4302566 ~ 4304048 (-)
G163315 NA other upstream 1101561 4334843 ~ 4820499 (-)

Expression


Co-expression Network