LOC120543687


Basic Information

Item Value
gene id LOC120543687
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 3984293 ~ 3987038 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU221238
CCAACATGAAGACCAATCATTACTCTTGACTCGTATCGCTGAACTCTACTGTATACACCAGCATTAAAAAGATGGATCCTTGTGCAGCTGTGAAGCCCAAAAAGAAGATCCTCCAAAACATCCAAAACCTCCCAGGGCCAAGTGGAGCAATTCAACAGAGGAATGACCCAACAAAGGACAGCGACTCATCAGAGGACAGCAACTCATCAGAG
>XR_005636383.1
GGTTTCCAACATGAAGACCAATCATTACTCTTGACTCGTATCGCTGAACTCTACTGTATACACCAGCATTAAAAAGATGGATCCTTGTGCAGCTGTGAAGCCCAAAAAGAAGATCCTCCAAAACATCCAAAACCTCCCAGGGCCAAGTGGAGCAATTCAACAGAGGAATGACCCAACAAAGGACAGCGACTCATCAGAGGACAGCAACTCATCAGAGGACAGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU221238 False 212 lncRNA 0.46 3 3984300 3987033
XR_005636383.1 True 224 lncRNA 0.46 3 3984293 3987038

Neighbor

gene id symbol gene type direction distance location
LOC120543678 NA coding downstream 98420 3868758 ~ 3885873 (-)
LOC120543683 NA coding downstream 117059 3861769 ~ 3867234 (-)
LOC120543681 NA coding downstream 319517 3663829 ~ 3664776 (-)
LOC120543675 LOC100703014,LOC103354664,LOC102796844,LOC102305065,LOC101476254 coding downstream 344816 3625730 ~ 3639477 (-)
LOC120543685 LOC106675582 coding downstream 380179 3603444 ~ 3604114 (-)
LOC120543692 NA coding upstream 125831 4112869 ~ 4124813 (-)
LOC120543691 NA coding upstream 140751 4127789 ~ 4137034 (-)
LOC120544557 LOC104931097,LOC103374139,LOC102075861 coding upstream 211320 4198358 ~ 4207993 (-)
LOC120544550 LOC101067509,LOC102791768 coding upstream 262088 4249126 ~ 4260159 (-)
rbmx2 rbmx2,LOC106567889,LOC102785849 coding upstream 317888 4304926 ~ 4309915 (-)
LOC120543690 NA non-coding downstream 8486 3975407 ~ 3975807 (-)
LOC120543688 NA non-coding downstream 15200 3968385 ~ 3969093 (-)
G163261 NA non-coding downstream 50813 3932672 ~ 3933480 (-)
G163267 NA non-coding downstream 90405 3893513 ~ 3893888 (-)
G163090 NA non-coding downstream 127745 3824470 ~ 3856548 (-)
G163285 NA non-coding upstream 337 3987375 ~ 3987691 (-)
G163305 NA non-coding upstream 147715 4134753 ~ 4135589 (-)
G163297 NA non-coding upstream 158761 4145799 ~ 4201600 (-)
G163312 NA non-coding upstream 178458 4165496 ~ 4201717 (-)
G163316 NA non-coding upstream 179345 4166383 ~ 4375921 (-)
G163259 NA other downstream 110178 3870325 ~ 3874115 (-)
LOC120544249 alg8 other downstream 751011 3178767 ~ 3233282 (-)
LOC120544311 LOC101470105,LOC107380983,LOC102214284 other downstream 786045 3185970 ~ 3198248 (-)
LOC120543772 NA other downstream 888819 3037923 ~ 3095474 (-)
G162910 NA other downstream 1154699 2827089 ~ 2829594 (-)
rnasekb rnasek,LOC107554319,LOC101475670 other upstream 160825 4147863 ~ 4157624 (-)
LOC120544555 siah2,LOC101471392,LOC102786130 other upstream 294735 4281773 ~ 4821872 (-)
G163334 NA other upstream 315528 4302566 ~ 4304048 (-)
G163315 NA other upstream 347805 4334843 ~ 4820499 (-)
taf9 NA other upstream 454951 4441989 ~ 4443562 (-)

Expression


Co-expression Network