G163300


Basic Information

Item Value
gene id G163300
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 4183991 ~ 4279312 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU221260
GTAAATCTCTCTTTCTACACctcTAAcaattctcaaaatatcaccacacttccacgtcTTCACTTCTTTGAGCTacgttactggttactggttgcacggcattCGACCGGTCAcgactgttttcccaaagatggCGCTCTCATGTAAACATTAAGGCTACAGTCTTTATAAAccatgtttttaataaactgtctgtacactgacagagttctcaatgcttcggtgtacatgtagggaccctcatgatgctaccgtggaagtgtggtgatattttgagaatt

Function

GO:

id name namespace
GO:0035296 regulation of tube diameter biological_process
GO:0097746 blood vessel diameter maintenance biological_process
GO:0035150 regulation of tube size biological_process
GO:0097756 negative regulation of blood vessel diameter biological_process
GO:0042310 vasoconstriction biological_process
GO:0003018 vascular process in circulatory system biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU221260 True 281 lncRNA 0.42 2 4183991 4279312

Neighbor

gene id symbol gene type direction distance location
LOC120543691 NA coding downstream 46957 4127789 ~ 4137034 (-)
LOC120543692 NA coding downstream 59178 4112869 ~ 4124813 (-)
LOC120543678 NA coding downstream 298118 3868758 ~ 3885873 (-)
LOC120543683 NA coding downstream 316757 3861769 ~ 3867234 (-)
LOC120543681 NA coding downstream 519215 3663829 ~ 3664776 (-)
rbmx2 rbmx2,LOC106567889,LOC102785849 coding upstream 25614 4304926 ~ 4309915 (-)
LOC120544562 LOC103395674,LOC101068541,LOC105888650,LOC101167724 coding upstream 186532 4465844 ~ 4466381 (-)
LOC120544559 NA coding upstream 188888 4468200 ~ 4468934 (-)
LOC120544570 LOC104935308,LOC104932967 coding upstream 193945 4473257 ~ 4474025 (-)
LOC120544579 LOC107375340,LOC107690788,LOC107719248,LOC107579420 coding upstream 215207 4494519 ~ 4494887 (-)
G163321 NA non-coding downstream 12702 4170582 ~ 4171289 (-)
G163305 NA non-coding downstream 48402 4134753 ~ 4135589 (-)
G163285 NA non-coding downstream 196300 3987375 ~ 3987691 (-)
LOC120543687 NA non-coding downstream 196953 3984293 ~ 3987038 (-)
LOC120543690 NA non-coding downstream 208184 3975407 ~ 3975807 (-)
LOC120544588 NA non-coding upstream 6164 4285476 ~ 4285761 (-)
G163317 NA non-coding upstream 62248 4341560 ~ 4420569 (-)
G163328 NA non-coding upstream 66261 4345573 ~ 4411771 (-)
G163377 NA non-coding upstream 280192 4559504 ~ 4580903 (-)
G163390 LOC104935308,LOC104932967 non-coding upstream 284717 4564029 ~ 4583587 (-)
rnasekb rnasek,LOC107554319,LOC101475670 other downstream 26367 4147863 ~ 4157624 (-)
G163259 NA other downstream 309876 3870325 ~ 3874115 (-)
LOC120544249 alg8 other downstream 950709 3178767 ~ 3233282 (-)
LOC120544311 LOC101470105,LOC107380983,LOC102214284 other downstream 985743 3185970 ~ 3198248 (-)
LOC120543772 NA other downstream 1088517 3037923 ~ 3095474 (-)
LOC120544555 siah2,LOC101471392,LOC102786130 other upstream 2461 4281773 ~ 4821872 (-)
G163334 NA other upstream 23254 4302566 ~ 4304048 (-)
G163315 NA other upstream 55531 4334843 ~ 4820499 (-)
taf9 NA other upstream 162677 4441989 ~ 4443562 (-)
LOC120544568 LOC104932967,LOC104935308 other upstream 211693 4491005 ~ 4493351 (-)

Expression


Co-expression Network