taf9


Basic Information

Item Value
gene id taf9
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 4441989 ~ 4443562 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU221329
atagcatgtctaaaagtcataaaaagtcatagtatagcatgtctaaaagttattaaaaagtcatagtatagtatgtctaaaagttattaaaaagtcatagtatagcatgtctaaaagttattaaaaagtcatagtatagtatgtctaaaagttattaaaaagtcatagtatagtatgtctaaaagttattaaaaagtcatagtatagtatgtctaaaagttattaaaaagtcatagtatagcatgtctaaaagttattaaaaagtcatagtatagcatgtctaaaagttattaaaaagtcatagtatagtatgtctaaaagttattaaaaagtcatagtatagtatgtctaaaagttattaaaaagtcatagtatagtatgtctaaaagttattaaaaagtcatagtatagtatgtctaaaagttattaaaaagtcatagtatagtatgtctaaaagtcattaaaaagtcatagtatagcatgtctaaaagttattaaaaagtcGACGAACATGAGTTTTAACGctgcctcttcttctcctcctcctcttcctcctcctcctcctcttcctcctcctcctcttcctcctcctcttcctcctcctcctcttcctcctcctcttcctcctcctcctcctcctcctcctcctcctccctcctcctcctcttcctcctcctcctcctcctcctcccgaCAGTCACACCCTCCACGCCCGCCGTCTCCAACGTGCTCATCAACCCGTCTCTGATTGGCTCCAAGAACATCCTCATCACCGCCAACATGGTGTCGCAGAGCTCGGCCGGCGCCGGCGGTGGCGGTGGCGGTAGCGGCGACTCGCTGAAGAGGAAGCACGAAGACGAGGACGACTACGACGCTTTATGACGGCGCGACTGAAGACGAAGGatctttctcttctcctcttttttgttgttgttgttgttgttgttgttgttgaatgaaTCGCACCGGTTGACCGCCTGCTACTGTTCTCACCAAAAACCGTggactacagtatacttgtggggtccggacagcctcgtggggaccaaaatgctggtccccacaaggttaaagggctgtttcagggttaagacttggttttaggactagggttagaattaggttatggttagggtgagggtaagggttaaggttaggcatttagttgtgatggttaaggttagggtaagggttaaggttaggcatttagttgtgatggttaaggttagggtaagggttagggaatgcattatctcaatatgtccccacaaagatagtaatacagacatgtgtgtgtgtgagatagagcgagggatcagtgagagagtgatggcgatTAGCTCCAGAGCGAGtgccgactctaga
>XM_039778421.1
TCACACCCTCCACGCCCGCCGTCTCCAACGTGCTCATCAACCCGTCTCTGATTGGCTCCAAGAACATCCTCATCACCGCCAACATGGTGTCGCAGAGCTCGGCCGGCGCCGGCGGTGGCGGTGGCGGTAGCGGCGACTCGCTGAAGAGGAAGCACGAAGACGAGGACGACTACGACGCTTTATGACGGCGCGACTGAAGACGAAGGatctttctcttctcctcttttttgttgttgttgttgttgttgttgttgttgaatgaaTCGCACCGGTTGACCGCCTGCTACTGTTCTCACCAAAAACCGTggactacagtatacttgtggggtccggacagcctcgtggggaccaaaatgctggtccccacaaggttaaagggctgtttcagggttaagacttggttttaggactagggttaga

Function

NR:

description
PREDICTED: transcription initiation factor TFIID subunit 9-like isoform X1

GO: NA

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU221329 True 1365 lncRNA 0.41 2 4441989 4443562
XM_039778421.1 False 420 mRNA 0.55 1 4442237 4442656

Neighbor

gene id symbol gene type direction distance location
rbmx2 rbmx2,LOC106567889,LOC102785849 coding downstream 132074 4304926 ~ 4309915 (-)
LOC120544550 LOC101067509,LOC102791768 coding downstream 181830 4249126 ~ 4260159 (-)
LOC120544557 LOC104931097,LOC103374139,LOC102075861 coding downstream 233996 4198358 ~ 4207993 (-)
LOC120543691 NA coding downstream 304955 4127789 ~ 4137034 (-)
LOC120543692 NA coding downstream 317176 4112869 ~ 4124813 (-)
LOC120544562 LOC103395674,LOC101068541,LOC105888650,LOC101167724 coding upstream 22282 4465844 ~ 4466381 (-)
LOC120544559 NA coding upstream 24638 4468200 ~ 4468934 (-)
LOC120544570 LOC104935308,LOC104932967 coding upstream 29695 4473257 ~ 4474025 (-)
LOC120544579 LOC107375340,LOC107690788,LOC107719248,LOC107579420 coding upstream 50957 4494519 ~ 4494887 (-)
LOC120544567 si:ch1073-153i20.5,si:ch73-368j24.13,LOC103462478,LOC107386469,LOC102204254,LOC103381127 coding upstream 158133 4601695 ~ 4602995 (-)
G163317 NA non-coding downstream 21420 4341560 ~ 4420569 (-)
G163328 NA non-coding downstream 30218 4345573 ~ 4411771 (-)
G163316 NA non-coding downstream 66068 4166383 ~ 4375921 (-)
G163342 NA non-coding downstream 116069 4238728 ~ 4325920 (-)
G163301 NA non-coding downstream 127371 4168202 ~ 4314618 (-)
G163377 NA non-coding upstream 115942 4559504 ~ 4580903 (-)
G163390 LOC104935308,LOC104932967 non-coding upstream 120467 4564029 ~ 4583587 (-)
G163391 NA non-coding upstream 124010 4567572 ~ 4721994 (-)
G163376 NA non-coding upstream 133976 4577538 ~ 4579670 (-)
G163404 NA non-coding upstream 186095 4629657 ~ 4648343 (-)
G163334 NA other downstream 137941 4302566 ~ 4304048 (-)
rnasekb rnasek,LOC107554319,LOC101475670 other downstream 284365 4147863 ~ 4157624 (-)
G163259 NA other downstream 567874 3870325 ~ 3874115 (-)
LOC120544249 alg8 other downstream 1208707 3178767 ~ 3233282 (-)
LOC120544568 LOC104932967,LOC104935308 other upstream 47443 4491005 ~ 4493351 (-)
LOC120544552 LOC104935312,LOC100692486,LOC101485649,LOC106922321,LOC102232317,LOC102292363 other upstream 163174 4606736 ~ 4694616 (-)
LOC120544563 NA other upstream 291652 4735214 ~ 4750430 (-)
G163767 NA other upstream 2813576 7257138 ~ 7286265 (-)
wwc1 wwc1 other upstream 2887352 7330914 ~ 7398125 (-)

Expression


Co-expression Network